EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00834 alignment
(12 sequences with 645 bp)


ALSE_ECOLI/2-202 AAAATCTCCCCCTCGTTAATGTGTATGGATCTGCTGAAATTTAAAGAACAGATCGAATTTATCGACAGC---CATGCCGATTACTTCCACATCGATATCATGGACGGTCACTTTGTCCCCAATCTGACACTCTCACCGTTCTTCGTAAGTCAGGTTAAAAAACTG---------GCAACTAAACCGCTCGACTGTCATCTGATGGTGACGCGGCCGCAGGATTACATTGCTCAACTGGCGCGTGCGGGAGCAGAT...TTCATCACTCTGCATCCGGAAACC---ATCAACGGCCAGGCGTTCCGCCTGATTGATGAAATCCGCCGTCATGACATGAAAGTGGGGCTGATCCTTAACCCGGAGACGCCAGTTGAGGCCATGAAATACTATATCCATAAGGCCGATAAAATTACGGTCATGACTGTCGATCCCGGCTTTGCCGGACAACCGTTCATTCCTGAAATGCTGGATAAACTTGCCGAACTG.........AAGGCATGGCGTGAACGAGAAGGT------------CTGGAGTACGAAATTGAGGTGGACGGTTCCTGCAACCAGGCAACTTACGAAAAACTGATGGCGGCAGGGGCGGATGTCTTTATCGTCGGCactTCCGGCCTGTTTAATCAT---
RPE_SYNY3/5-207 GTCGTTGCTCCCTCAATTTTGTCAGCGGACTTCAGCCGCTTAGGTGAAGAAATTAAAGCCGTGGACGAAGCAGGGGCTGATTGGATCCACGTTGATGTGATGGACGGCCGCTTTGTGCCCAATATCACCATTGGCCCGCTGATTGTGGACGCCATCCGTCCCTTG---------ACAAAAAAAACCCTGGACGTTCATTTAATGATCGTTGAACCGGAAAAATACGTCGAAGATTTTGCCAAGGCCGGTGCTGAC...ATCATTTCCGTCCATGTGGAGCACAACGCCTCTCCCCATCTCCATCGTACCCTTTGTCAAATTCGGGAATTGGGTAAAAAGGCCGGGGCGGTGCTCAATCCTTCCACTCCTCTGGATTTTCTTGAATATGTGTTGCCCGTCTGCGATCTAATCTTGATCATGAGCGTTAATCCCGGCTTTGGTGGTCAAAGCTTCATTCCCGAAGTGTTGCCTAAAATCCGTGCTCTC.........CGTCAGATGTGTGATGAGCGGGGT------------CTGGATCCCTGGATCGAAGTGGATGGTGGTCTTAAACCCAATAACACTTGGCAGGTTCTAGAGGCCGGAGCCAACGCCATTGTGGCCGGT...TCTGCGGTGTTCAATGCCCCC
RPE_SOLTU/58-260 ATTGTTTCTCCGTCCATCCTTTCTGCTAACTTTTCTAAATTAGGAGAGCAGGTGAAAGCAATTGAGCAGGCAGGCTGTGACTGGATTCATGTAGATGTGATGGACGGTCGATTTGTTCCAAATATAACTATTGGACCCCTTGTAGTTGATTCCTTGCGCCCTATC---------ACAGATCTACCATTGGATGTGCATCTGATGATTGTCGAACCTGACCAGAGAGTACCTGACTTCATAAAAGCAGGTGCTGAT...ATTGTCAGTGTTCACTGTGAGCAATCTTCTACGATCCACTTGCATCGTACAATAAATCAGATTAAAAGTTTGGGAGCAAAAGCTGGGGTTGTCCTCAATCCTGGAACCCCTTTAACCGCAATTGAATATGTCCTTGATGCTGTTGATCTGGTGTTGATTATGTCTGTAAACCCTGGATTTGGGGGACAGAGCTTCATTGAGAGTCAGGTCAAGAAAATCTCGGACTTG.........AGAAAAATCTGCGCTGAGAGGGGA------------TTAAACCCTTGGATTGAAGTTGATGGTGGAGTTGGTCCCAAAAATGCTTACAAGGTCATTGAAGCTGGAGCCAATGCCTTGGTAGCTGGT...TCTGCTGTCTTTGGAGCTCCT
RPE_BACSU/3-204 AAGGTTGCACCATCTATTCTTTCCGCTGATTTTGCCGCTTTAGGCAATGAGATTAAAGATGTAGAAAAAGGCGGAGCCGATTGTATTCATATTGATGTTATGGACGGCCATTTTGTCCCGAATATCACAATCGGTCCGCTGATTGTAGAAGCGGTCCGGCCGGTA---------ACGGATCTGCCGCTTGATGTCCATTTAATGATAGAAGAGCCGGATCGTTATATCCCGGCTTTTGCGAAAGCAGGCGCAGAT...ATCCTGTCTGTGCATGCTGAG------GCATGTCCGCACCTGCACCGTACCATCCAGCTCATTAAAGAGCAAGGAGTGAAGGCCGGAGTAGTTCTAAACCCGCATACCCCTGTACAAGTCATCGAACATGTTTTCGACGATCTTGATCTTGTTCTTTTAATGACGGTGAACCCGGGCTTCGGCGGGCAGAAATTTATTCATTCAGTCCTTCCTAAAATAAAAGAGGTT.........AAGCGAATGGCGGATGAAAAAGGAAAA---------AAAGATCTGTTAATTGAAGTAGACGGCGGCGTCAACAAAGAAACCGCTCCGCTCGTCATTGAAGCGGGCGCAAATTTACTCGTTGCCGGT...TCAGCTGTTTATGGCCAGTCT
RPE_ECOLI/5-206 TTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCCGCCTGGGTGAAGATACCGCAAAAGCCCTGGCAGCTGGCGCTGATGTCGTGCATTTTGACGTCATGGATAACCACTATGTTCCCAATCTGACGATTGGGCCAATGGTGCTGAAATCCTTGCGTAACTATGGC------ATTACCGCCCCTATCGACGTACACCTGATGGTGAAACCCGTCGATCGCATTGTGCCTGATTTCGCTGCCGCTGGTGCCAGC...ATCATTACCTTTCATCCAGAA------GCCTCCGAGCATGTTGACCGCACGCTGCAACTGATTAAAGAAAATGGCTGTAAAGCGGGTCTGGTATTTAACCCGGCGACACCTCTGAGCTATCTGGATTACGTGATGGATAAGCTGGATGTGATCCTGCTGATGTCCGTCAACCCTGGTTTCGGCGGTCAGTCTTTCATTCCTCAAACACTGGATAAACTGCGCGAAGTA.........CGTCGCCGTATCGAC------------GAGTCTGGCTTTGACATTCGACTAGAAGTGGACGGTGGCGTGAAGGTGAACAACATTGGCGAAATCGCTGCGGCGGGCGCGGATATGTTCGTCGCCGGT...TCGGCAATCTTCGACCAGCCA
RPEC_ALCEU/17-221 CGCCTGGCGCCATCCATCCTGTCGGCCGATTTCGCGCGCCTGGGCGAAGAGGTGTGCGCGATCGAGGCCGGCGGTGCAGACCTGGTGCACTTCGATGTGATGGACAACCACTATGTGCCCAACCTGACCATTGGCCCGCTGGTGTGCGAGGCGATCCGGCCGCTG---------GTCTCCATCCCCATCGACGTGCATCTGATGGTGGAACCGGTCGATGCGCTGATCCCGCTGTTCGCCAAGGCCGGCGCCAAC...ATCATCAGCTTCCATCCGGAG------GCGAGCCGCCATGTCGACCGCACCATCGGCCTGATCCGCGACCACGGCTGCAAGGCAGGCCTGGTGCTCAACCCGGCCACGCCGCTGGGCTGGCTGGACCATACGCTGGACCAGCTCGACCTGGTGCTGCTGATGAGCGTGAACCCGGGCTTTGGCGGCCAGGCCTTCATTCCGGGCGTGCTGGACAAGGTGCGCCAGGCA.........CGCGCGCGCATCGACCGGCAGGTGGACGCCGGCGGGCGGCCGGTCTGGCTGGAGATCGACGGCGGCGTCAAGGCCGACAACATTGCCGCGATCGCGCGAGCGGGCGCCGACACCTTCGTTGCCGGC...AGCGCCGTGTTCGGCGCGCCC
RPE_MYCTU/9-207 CTGATAGCGCCGTCGATCCTAGCCGCTGATTTCGCCAGACTCGCGGACGAAGCGGCCGCGGTCAAC------GGCGCCGACTGGTTGCATGTAGACGTGATGGACGGTCACTTCGTGCCAAACCTGACCATCGGCCTGCCGGTGGTGGAGAGCCTGCTGGCGGTCACCGACATCCCG---------ATGGATTGCCATCTAATGATCGACAACCCGGACCGGTGGGCTCCGCCGTATGCCGAGGCGGGCGCCTAC...AACGTCACCTTCCACGCGGAG------GCCACCGACAACCCGGTCGGCGTGGCCCGCGATATCCGGGCCGCGGGGGCCAAAGCCGGGATCAGCGTGAAGCCGGGGACCCCGCTGGAGCCATACCTGGACATCCTGCCCCATTTCGACACCCTGCTCGTCATGTCGGTAGAGCCTGGCTTCGGTGGCCAGCGGTTCATTCCCGAGGTGCTGAGCAAGGTGCGTGCGGTG.........CGCAAGATGGTCGACGCGGGCGAG------------CTGACGATCCTGGTCGAGATCGACGGCGGCATCAACGACGACACGATTGAGCAGGCTGCCGAGGCCGGCGTCGACTGCTTTGTCGCCGGA...TCGGCGGTGTACGGCGCCGAT
RPE_HELPY/2-200 AAAGTAGCTCCGAGCCTTTTGAGCGCTGATTTTATGCATTTAGCCAAAGAGATAGAGAGCGTGAGTAACGCT------GATTTTTTGCATGTGGATGTGATGGATGGGCATTATGTGCCTAATTTAACCATGGGGCCTGTGGTTTTAGAGAATGTTACTCAAATG---------AGCCAAGTGCCTTTAGATGTGCATTTAATGGTAGAAAACGCGAGCTTTTTTGCAGAATTGTTCGCTCCTTTAAAACCGCAA...ATCATCAGCATTCATGCAGAA------AATGAAAAGCACCCCCACAGGGTGTTGCAACTCATTAAAAATCTAGGCATCACGCCAGGCATTGTCCTAAACCCCCACACGCATGAAGAAAGTATTAAATACTTGCTAGAAAGCGTGGGGCTAGTGCTTTTAATGAGCGTGAATCCGGGCTTTGGTGGGCAGAAGTTTTTAGATCTGGTGCTAGAAAAATGCCTGAAAGTT.........AAAGAATTGATCAAACGCTACAAC------------CCTAGCTGTCTTTTAGAAGTGGATGGGGGCGTGAATGATAAAAATATCTTTGAACTCCAACAAGCGGGCGTGGATGTGGTGGTTTCAGGG...AGTTATATTTTTAAATCCAAA
RPE_METJA/3-201 AAAATTGGAGCTTCAATACTATCTGCTGATTTTGGGCATTTAAGGGAGGAGATTAAAAAGGCAGAGGAAGCAGGGGTTGATTTCTTTCATGTTGATATGATGGACGGTCACTTTGTCCCAAATATAAGCATGGGAATTGGAATTGCAAAGCATGTTAAAAAGCTA---------ACAGAACTCCCAGTAGAAGTGCATTTAATGGTGGAAAATGTTGATTTATTTGTTAATGAATTTGAGGAGATGGAT------...TATATAACATTCCACATAGAG------GCGGTTAAGTTTCCTTTTAGAATTATAAATAGGATTAAAAGTATTGGAGCTAAGCCGATAGTTGCTTTAAACCCGGCAACACCTTTGGATGCAATAGAGTATATTTTGGGAGATGTTTATGCTGTTTTAGTTATGACTGTTGAACCTGGCTTTTCTGGACAAAAGTTTATTCCAGTGATGACAAAGAAGATTAGAAAGTTA.........AAGAGCATGATTGTTGAAAATGGA------------TATGATACAAAAATATTCGTTGATGGAGGAATAAATGTTGAAACAGCTCCATTGGCAGTAAAAGCTGGAGCTGATGTTTTAGTTGCTGCA...TCTGCAATATTTGGAAAGGAT
RPE_SCHPO/5-204 AAAATTGCTCCGTCTTTGTTAGCAGGCGACTTTGCCAATCTTGAAAAAGAGGTTGGCCGTATGCTTAAATATGGTAGCGATTGGTTACACGTAGATGTTATGGACGCACAGTTTGTTCCTAACCTGACCATCGGACCCATTGTTGTGAAAGCTATGCGTAACCATTACACCAAGGAGGAGGCCTTTTTCGATTGTCATTTGATGGTTATTGAACCCGAAAGATATATTGATCAGTTGGCAGATGCTGGAGCCAGT...CTATTTTGCTTTCATTATGAA------GCCACAGAGAAGCATGAAGAAATTATCAGCCGTGCTCACGAGAAGGGTATGTTGGTAGGTTGTGCTTTGAAACCCAAAACACCAGTGGAGGTGATTTTGCCGTTCGTAGAAAAGCTCGACATGGTATTGGTTATGACTGTTGAACCAGGTAAGGGTGGACAGAGCTTCATGCCCGAATGCCTTCCTAAAGTTGAGTTTCTT.........CGCAAAAAGTATCCAACA------------------------TTAAACGTGGAAGTCGATGGAGGTCTCTCTTTAAAAACTGTCGATGCAGCGGCTGATGCTGGTGCAAATGTTATTGTCGCAGGA...ACGGCTGTTTTCCATGCTCAA
SGCE_ECOLI/2-198 ATCCTGCACCCTTCTCTCGCCAGCGCAAATCCTCTGCACTATGGTCGTGAGCTGACGGCATTGGACAATCTGGATTTTGGGAGCCTGCATCTGGATATTGAGGACAGCAGCTTCATTAACAACATTACGTTTGGGATGAAAACGGTGCAGGCCGTCGCCAGACAG---------ACGCCTCATCCCTTGTCCTTTCATTTCATGCTTGCCCGGCCACAGCGCTGGTTTAACGCGCTGGCTGAAATCAGACCCGCG...TGGATCTTCGTTCATGCAGAA------ACGCTGGACTATCCTTCGGAAACGTTAACTGAGATCCGCCATACCGGCGCACGAGCCGGACTGGTATTTAATCCGGCAACCCCGATCGACGCCTGGCGATATCTGGCGTCTGAGCTGGACGGAGTGATGGTGATGACCAGTGAGCCCGATGGGCAGGGACAGCGGTTTATTCCCTCCATGTGCGAGAAAATCCAAAAAGTA.........CGCACGGCTTTTCCTCAG------------------------ACCGAGTGCTGGGCCGACGGTGGAATTACGCTGGCAGCTGCACAGCAACTGGCAGCAGCTGGGGCGCAACATATGGTGATTGGG...CGCGCCCTGTTCTCTTCATCT
RPE_MYCPN/9-203 GAAATTGCCTTTTCGCTTTTACCACTGTTACACCAGTTTGACCGCAAGTTGTTAGAACAATTCTTTGCGGACGGCTTGCGCTTAATCCACTATGACGTGATGGAC---CATTTTGTGGACAACACTGTCTTTCAAGGGGAACATTTAGATGAATTACAACAAATTGGT------------TTTCAGGTCAATGTACATTTGATGGTACAAGCATTAGAACAAATCTTGCCAGTATACCTCCACCATCAAGCCGTTaagCGCATTTCCTTTCACGTTGAACCGTTTGATATCCCTACCATCAAACACTTTATTGCGCAAATTAAACAAGCGGGAAAACAAGTCGGTTTAGCGTTTAAATTCACCACTCCGCTTGTAAATTACGAGCGCTTGGTGCAACAACTGGACTTTGTTACCTTAATGAGTGTCCCCCCAGGAAAGGGCGGGCAAGCCTTTAACAGTGCTGTTTTTAATAACTTAAAACAAGCC.........CACAAATACCACTGCTCA------------------------------ATTGAAATCGATGGTGGGATCAAATTAGATAACATTCACCAAATCCAG---GATGATGTCAATTTTATTGTCATGGGA...AGTGGCTTTATAAAATTAGAA