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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00831 phylogeny
for amino acid alignment


 
(((((((((((((((RL29_BORBU/2-59,RL29_FUSNN/3-60),RL29_THEMA/3-60),((((RL29_CLOPE/6-63,RL29_CLOAB/3-60),RL29_THETN/3-60),((RL29_BACST/3-60,(RL29_LISMO/3-60,RL29_STAEP/3-60)),(RL29_LACPL/3-60,RL29_BACHD/3-60))),(((RL29_MYCBO/7-60,RL29_CORGL/7-64),RL29_STRCO/7-64),Q8G410_BIFLO/10-67))),((RL29_AERPE/3-60,(RL29_AQUAE/10-67,(RL29_HELPY/3-60,RL29_CAMJE/3-60))),((O97445_GIALA/6-65,(Q8SQQ7_ENCCU/5-61,((RL35_BABBO/6-64,(((RL352_ARATH/6-64,((Q8R102_MOUSE/6-64,RL35_CAEEL/6-64),Q962T0_SPOFR/6-64)),(Q96UT5_PARBR/8-66,Q96W38_OPHNO/21-78)),(RL35_SCHPO/5-63,RL35_YEAST/6-61))),Q26035_PLAFA/6-63))),(((((RL29_METMA/6-64,(RL29_HALMA/5-63,RL29_HALN1/6-64)),(RL29_METKA/8-66,RL29_PYRAE/9-66)),RL29_THEVO/6-64),(RL29_METTH/6-64,RL29_METJA/6-64)),((((RL29_LEPIN/6-61,RL29_PYRHO/3-61),(RL29_BACTN/3-60,RL29_CHLTE/3-60)),(RL29_SULTO/19-75,RL29_SULSO/5-62)),RL29_ARCFU/6-64))))),(((RL29_XANCP/3-60,RL29_XYLFT/3-60),((Q8EK61_SHEON/3-60,(RL29_HAEIN/3-60,((((RL29_BUCAI/4-61,RL29_BUCBP/3-60),RL29_WIGBR/3-60),RL29_ECOLI/3-60),RL29_PSEAE/3-60))),(RL29_RALSO/3-60,RL29_NEIMB/3-60))),((RL29_AGRT5/3-60,((RL29_BRUSU/3-60,RL29_RHILO/3-60),Q89J92_BRAJA/6-63)),RL29_CAUCR/3-60))),(RL29_STRPY/10-67,RL29_LACLA/10-67)),(((RL29_MYCGA/2-59,RL29_MYCGE/4-61),(RL29_UREPA/5-62,Q8EUC0_MYCPE/4-61)),((RL29_SPICI/1-58,RL29_MYCCA/6-63),RL29_MYCPU/3-60))),(RL29_DEIRA/3-60,RL29_THETH/10-67)),RL29_CHLTR/8-66),(RK29_ARATH/67-124,RK29_MAIZE/68-125)),RK29_GUITH/7-64),RK29_ODOSI/6-63),Q8DMM4_SYNEL/6-63),(RL29_ANASP/6-63,RL29_SYNY3/6-63)),RL29_SYNP6/6-63,RK29_PORPU/6-63);
(((((((((((((((RL29_BORBU/2-59:0.93182,RL29_FUSNN/3-60:0.17887):0.13702,RL29_THEMA/3-60:0.57252):0.02143,((((RL29_CLOPE/6-63:0.18297,RL29_CLOAB/3-60:0.13508):0.21812,RL29_THETN/3-60:0.04989):0.14604,((RL29_BACST/3-60:0.01764,(RL29_LISMO/3-60:0.14715,RL29_STAEP/3-60:0.16434):0.09889):0.04020,(RL29_LACPL/3-60:0.31224,RL29_BACHD/3-60:0.18312):0.05199):0.11315):0.00000,(((RL29_MYCBO/7-60:0.15402,RL29_CORGL/7-64:0.20110):0.14395,RL29_STRCO/7-64:0.19863):0.07797,Q8G410_BIFLO/10-67:0.35887):0.14267):0.02253):0.17123,((RL29_AERPE/3-60:0.29569,(RL29_AQUAE/10-67:0.33044,(RL29_HELPY/3-60:0.15698,RL29_CAMJE/3-60:0.42853):0.64210):0.20421):0.18032,((O97445_GIALA/6-65:0.34877,(Q8SQQ7_ENCCU/5-61:1.00081,((RL35_BABBO/6-64:0.38342,(((RL352_ARATH/6-64:0.32755,((Q8R102_MOUSE/6-64:0.07182,RL35_CAEEL/6-64:0.24803):0.06630,Q962T0_SPOFR/6-64:0.28456):0.00830):0.03903,(Q96UT5_PARBR/8-66:0.17003,Q96W38_OPHNO/21-78:0.19740):0.22741):0.07902,(RL35_SCHPO/5-63:0.31777,RL35_YEAST/6-61:0.28634):0.13159):0.01018):0.10723,Q26035_PLAFA/6-63:0.41362):0.10502):0.16442):0.37955,(((((RL29_METMA/6-64:0.26292,(RL29_HALMA/5-63:0.18845,RL29_HALN1/6-64:0.07232):0.20605):0.19582,(RL29_METKA/8-66:0.28120,RL29_PYRAE/9-66:0.55924):0.05760):0.03340,RL29_THEVO/6-64:0.55413):0.16262,(RL29_METTH/6-64:0.40403,RL29_METJA/6-64:0.19541):0.06912):0.22172,((((RL29_LEPIN/6-61:1.00978,RL29_PYRHO/3-61:0.31593):0.09219,(RL29_BACTN/3-60:0.91800,RL29_CHLTE/3-60:0.60928):0.37803):0.29244,(RL29_SULTO/19-75:0.44745,RL29_SULSO/5-62:0.12711):0.32700):0.08630,RL29_ARCFU/6-64:0.56655):0.06271):0.05247):0.13375):0.13095):0.07569,(((RL29_XANCP/3-60:0.19225,RL29_XYLFT/3-60:0.21647):0.28656,((Q8EK61_SHEON/3-60:0.16967,(RL29_HAEIN/3-60:0.14454,((((RL29_BUCAI/4-61:0.23969,RL29_BUCBP/3-60:0.38591):0.07291,RL29_WIGBR/3-60:0.27980):0.12082,RL29_ECOLI/3-60:0.01120):0.07964,RL29_PSEAE/3-60:0.20733):0.06606):0.00000):0.06201,(RL29_RALSO/3-60:0.25039,RL29_NEIMB/3-60:0.15538):0.10340):0.14863):0.21840,((RL29_AGRT5/3-60:0.13518,((RL29_BRUSU/3-60:0.10194,RL29_RHILO/3-60:0.14113):0.10590,Q89J92_BRAJA/6-63:0.31211):0.09715):0.11781,RL29_CAUCR/3-60:0.21850):0.12626):0.10548):0.12685,(RL29_STRPY/10-67:0.03152,RL29_LACLA/10-67:0.25326):0.23490):0.09891,(((RL29_MYCGA/2-59:0.21442,RL29_MYCGE/4-61:0.21329):0.28883,(RL29_UREPA/5-62:0.28296,Q8EUC0_MYCPE/4-61:0.54284):0.10080):0.23372,((RL29_SPICI/1-58:0.25775,RL29_MYCCA/6-63:0.45944):0.24326,RL29_MYCPU/3-60:0.49406):0.00000):0.07684):0.05395,(RL29_DEIRA/3-60:0.64882,RL29_THETH/10-67:0.30568):0.23168):0.29522,RL29_CHLTR/8-66:0.68771):0.07489,(RK29_ARATH/67-124:0.14162,RK29_MAIZE/68-125:0.14181):0.51518):0.16584,RK29_GUITH/7-64:0.50768):0.15649,RK29_ODOSI/6-63:0.79327):0.12871,Q8DMM4_SYNEL/6-63:0.19556):0.17757,(RL29_ANASP/6-63:0.21199,RL29_SYNY3/6-63:0.25453):0.10128):0.10571,RL29_SYNP6/6-63:0.17447,RK29_PORPU/6-63:0.35847);