EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00825 alignment
(16 sequences with 402 bp)


RNPA_SYNY3/3-112 CTACCCAAAACACTGCGCTTAAAACACTGGCAAGATTTCCAGACCGTTTATCAGCAAGGAAAGCGACATCGTCACAGCAATTTACTAATGCGGGTTCTAGGCGATCGCCAGGCCGAC---------------.................................------------CATAGCCGTTTTGGCATCACCGTCAGCCAAAAAGTTAGTAAAAAAGCCACGGTTAGAAATCGTCTAAAACGTCAAATTCGCGCCGTCATTAACCATTTTCAGCCCCAAATCAAGCCGGGT---.........TTTGATGTGGTGATTATTGTCTTGCCCCAGGGCATTGGGTGCAATTATGAACGTTTTTTGCGAGAATTAGAGCAGTTATTTAGCCAAGCTGGG
RNPA_MYCCA/1-109 ATGAAAAACAAAAGAGTAATTAAGAAAAATTTTGAGTTTCAAGAAATAATTAATTACAAAAAA---ACTATTAAGAATTTTTGTTTTGTTATTTACTATAAAGATAATGAAGAATCA---------------.................................------------TATCTAAAGTATGGTATTAGTGTTGGAAAAAAA---ATAGGTAATGCTGTAATTAGAAATAAAGTAAAAAGACAAATTAGAATGATTTTAAAACAAAATATTTCTGAAATTGGAACTGTTTCT.........AAAGATATTATCATTCTGGTTAGAAAAAGTGTTTTAGAACTAAAATACGCTACATTATCTAAATTATTAATTAAGCTAATAAAAGAAATTAAA
RNPA_BACSU/1-108 TTGAAGAAGCGAAATCGTTTAAAGAAAAATGAAGATTTTCAAAAAGTGTTTAAACATGGGACATCAGTTGCAAACCGCCAGTTTGTCTTATATACGCTTGATCAGCCTGAAAATGAT---------------.................................------------GAACTGCGTGTCGGGCTTTCCGTCAGCAAAAAA---ATTGGCAATGCTGTGATGCGAAATCGGATCAAACGTTTGATTCGGCAGGCCTTTCTTGAAGAGAAAGAGAGACTGAAGGAAAAG---.........---GATTACATCATTATTGCCAGAAAACCGGCGAGCCAGCTGACATATGAGGAAACGAAAAAAAGTCTGCAGCATCTATTCAGAAAGTCTTCA
RNPA_HELPY/13-140 TCTAAACCCTATGACTCTTTAAAAAACAAGAGTGAGTTTGACAGGGTTTATCAAAAGGGGTTTAAAAAACATAACCCTTTTTTTTCGCTCTTTGTTTTGGATTTGTCACAAGAGCCGCCAAAAGAAAAAGCGggctttaaagatccgctcttttgtaggcttaaaGACAAAAAAACGCTTTATTTATTAGGCTTGAGCGTGTCCAAAAAA---GTCGGCAACGCCGTGAAACGAAACCTTATCAAACGCCGTTTGCGTTCGCTTACATTAAAGCATGCCGCTCTTTGTCAAGGGCTT---.........---GCTTTGGTGTTTGTGCCTAGAAGCGATTGTTACCATTTGGATTTTTGGGCTTTAGAAAAACATTTTTTAGAAATGCTAACTTCCATTAAA
RNPA_PSEPK/5-113 TTCAGTCGGGAAAAGCGACTGCTTACACCCCGGCATTTCAAAGCGGTCTTCGACTCCCCAACCGGCAAGGTTCCAGGGAAAAACCTGCTGATCCTTGCTCGCGAGAACGGCCTCGAT---------------.................................------------CACCCACGCCTTGGCTTGGTAATCGGCAAGAAGAGTGTCAAGCTCGCCGTTCAACGCAACCGCCTCAAGCGCTTGATGCGCGATTCCTTTCGTCTGAACCAGCAATTGCTTGCCGGTCTG---.........---GACATCGTGATCGTCGCGCGCAAGGGATTGGGTGAGATAGAAAACCCGGAATTGCACCAACATTTTGGCAAGCTCTGGAAACGCCTGGCG
RNPA_PROMI/6-113 TTTCCAAGGGAGTTACGTTTGTTAACTCCCAAGCATTTCAATTTTGTTTTCCAGCAGCCACAG---CGTGCGAGTTCACCAGAAGTTACAATTTTGGGTCGCCAGAATGAGCTGGGG---------------.................................------------CATCCCCGCATCGGTCTAACTATCGCAAAGAAAAACGTTAAACGTGCTCATGAGCGTAATCGGATTAAACGATTAGCCCGTGAATACTTTCGTTTACATCAGCATCAATTACCTGCTATG---.........---GATTTTGTGGTATTAGTAAGGAAGGGGGTAGCTGAACTTGATAACCACCAATTGACGGAAGTGTTGGGTAAATTATGGCGTCGTCATTGT
RNPA_ECOLI/6-113 TTTCCCAGGGAGTTACGCTTGTTAACTCCCAGTCAATTCACATTCGTCTTCCAGCAGCCACAA---CGGGCTGGCACGCCGCAAATTACCATTCTCGGCCGCCTGAATTCGCTGGGG---------------.................................------------CATCCCCGTATCGGTCTTACAGTCGCCAAGAAAAACGTTCGACGCGCCCATGAACGCAATCGGATTAAACGTCTGACGCGTGAAAGCTTCCGTCTGCGCCAACATGAACTCCCGGCTATG---.........---GATTTCGTGGTGGTGGCGAAAAAAGGGGTTGCCGACCTCGATAACCGTGCTCTCTCGGAAGCGTTGGAAAAATTATGGCGCCGCCACTGT
RNPA_HAEIN/6-113 TTTTCAAGGGAGTTACGTTTATTAACTCCCATTCAATTCAAAAATGTTTTCGAACAGCCATTC---AGAGCTAGTACTCCCGAAATTACAATCCTTGCTAGAAAAAATAATCTTGAA---------------.................................------------CATCCGCGTTTAGGTTTGACCGTTGCTAAAAAACATTTAAAACGCGCCCACGAGCGTAATCGAATTAAACGCTTAGTACGAGAAAGTTTTCGTTTATCACAGCATCGTTTGCCTGCTTAT---.........---GATTTTGTTTTTGTAGCTAAAAATGGTATTGGAAAACTCGACAATAATACATTTGCACAAATACTCGAAAAATTATGGCAGAGACACATT
RNPA_BUCAP/6-113 TTTAAAAAAAAATCGAAATTGTTAAAATCTACAAATTTTCAATATGTTTTTAGTAATCCCTGT---AATAAAAATACTTTTCACATAAACATATTAGGACGTTCTAATTTATTAGGA---------------.................................------------CATCCTAGATTAGGTCTTAGTATATCGCGTAAAAATATTAAACATGCATATAGACGTAATAAAATTAAACGATTAATTCGAGAAACTTTTCGTTTATTACAACATAGATTAATCTCAATG---.........---GATTTCGTTGTTATAGCAAAGAAAAATATTGTTTATTTAAATAATAAAAAAATAGTAAATATATTGGAGTATATATGGTCAAACTATCAA
RNPA_COXBU/5-112 TTTTCCGTAGGTTGGCGAATCCGTACAACTGCTGAGTTTCGCCGTATATACGCGGCGCGTCAA---AGGATAATAGGCCGTTACTATTTACTTTATTATCGAGAGAATGAAATAAAA---------------.................................------------CATTCGCGATTAGGTGTAGTGGCAAGCAAACGCAATGTGAGAAAAGCCGTGTGGCGTAATCGCGTCAGACGAGTGGTCAAGGAGGCTTTTCGAATAAGAAAGAAGGACTTACCGGCGTTC---.........---GATATCGTCGTTGTTGCTAAGGCCTCTTCCGTGGAAGCGGATAACAAAGAGCTGTATGAATGTATAAACAAATTGTTCACGCAATTGGAA
RNPA_MYCPN/3-110 GCTAAGACCAAGCACCACCTCCGTGATCGTAAAGTATTTGCTGCCCTTTTAAGGAGTAAAAGA---CGCTTCTTCTCGACCTTTTTGATGGCCTACTTTATGCCGAACCGCGTCCGC---------------.................................------------ACTTGAAGGGCAGCGGTTTCGATATCAAAGACCAAATACAAGTTAGCGGTTGAGCGCAACTTAATTCGACGGCAAGTTAAAGCGATCATGCGGGAACAGTTTTGCAATTTAAACGCTGTT---.........---GATGTTTTGGTTATTATTAATCAAGGCTTCCTTGAATTAACATTTAAAGAAAAGCAAACGATCTTTTTAAACCTTTGCCAAAAGCTCCAA
RNPA_MYCGE/10-117 GTTAAAAAGAGTCACAGCTTAAGAGAACGCAAGGTTTTTACAACCATTCTTCAAAGTAAAACC---AGGTTCTTTGGTACCTTTATTAACGCTTATTTTATTAAGAATAATCATTCT---------------.................................------------ACTTGAAGGGTTGCAATATCAATTGCAAAAACTAAATATAAGCTAGCAGTACAACGTAACCTAATTAAGCGTCAGATCCGTAGTATCTTTCAACAAATTAGTAATAATTTAGAACCTTGA---.........---GATATTTTAGTTATTGTCAACAAAGGCTTTATTGAATTAACATTTAAAGAAAAACAAAAACTTTTTTTGCAACTATTAAAGCGGATAAAA
RNPA_STRBI/2-118 CTGCCTACCGAGAATCGGCTGAGGCGGCGCGAGGACTTCGCAACCGCGGTACGCCGAGGGCGC---CGGGCCGGTCGCCCGCTCCTCGTCGTCCACCTACGCAGCGGTGCAACGGACCCGCACGCGCCTGGG.................................GAGAGCGCTCCCCCGACGCGTGCGGGTTTCGTCGTGAGCAAGGCC---GTGGGCGGTGCGGTCGTACGCAACCAGGTGAAGCGTCGTCTGCGTCACCTCGTCTGCGACCGCCTCTCCGCCCTGCCCCCCGGT---.........AGCCTGGTGGTGGTACGGGCGTTGCCCGGAGCCGGCGACGCCGATCACGCACAGCTGGCCCGAGACCTGGACGCCGCTCTTCAGCGGCTCCTG
RNPA_MICLU/2-121 CTGCCCCGTGACCGTCGCGTCCGCACGCCCGCGGAGTTCCGTCACCTCGGTCGCACCGGCACC---CGCGCGGGTCGGCGCACCGTCGTGGTGAGCGTCGCCACGGACCCCGATCAGACCCGGTCCACGTCG.................................CCGAGCGCCCCTCGGCCGCGGGCCGGGTTCGTCGTGTCCAAGGCC---GTGGGGAACGCGGTGACCCGCAACCGGGTGAAGCGGCGGCTGCGCGCCGTCGTCGCGGAGCAGATGCGC---CTGCCCCCGCTGCGCgacctgccgGTTCTGGTGCAGGTCCGCGCGCTGCCTGCCGCCGCCGAGGCGGACTACGCGCTGCTGCGCCGCGAGACCGTCGGCGCGCTCGGCAAGGCCCTG
RNPA_MYCLE/2-110 CTTTCCGCATGTAACCGCATGAGGCGGTCATCCGAGTTTGATGCGACGGTAAAGTTTGGACTG---CGCGCAGTGCAGTCTGATGTTATCATTCACGTTTGGCGTGGGTGTAACAGGGATGAGACGAAG---.................................------------GCTCCCCATGTCGGGCTGATCATAGCTAAAACG---GTGGGCTCTGCTGTCGAACGTCATCGAGTGGCACGTCGATTGCGGCATGTTGCTCGGACCATGTTGGGGGAATTGGGCGGAGCT---.........GATCAGGTGGTGATCCGTGCGTTGCCGAGTAGTCGGAATGTGTCGTCAGCATGGTTAGCACAGCAGTTGCGAAATGGTTTGAGA---------
RNPA_MYCTU/2-109 CTTCGTGCACGCAACCGCATGAGGCGGTCAGCGGATTTTGAAACAACGGTGAAGCACGGGATG---CGTACCGTGCGGTCTGACATGGTCGTTTATTGGTGGCGTGGGAGTGGCGGT---------------.................................------------GGGCCGCGCGTCGGACTGATTATCGCCAAGTCG---GTGGGGTCGGCCGTGGAACGCCACCGCGTGGCACGTCGGCTGCGGCACGTGGCTGGGTCGATCGTCAAAGAACTCCACCCGTCC---.........GATCATGTGGTGATCCGCGCGCTGCCGAGCAGCCGGCATGTCTCCTCGGCTCGGTTGGAGCAGCAACTGCGATGCGGCTTGCGGAGGGCTGTC