EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00822 - PMP22_Claudin)
PMP-22/EMP/MP20/Claudin family
(Pfam reference: accession no. PF00822)
(Interpro reference: accession no. IPR004031)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 198 aa
(ave. pairwise identity: 0.30)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 9.14)
nucleotides
(available for above)
13 sequences @ 594 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 5.37)
amino acids, restricted set
(corresp. to available nt seqs)
13 sequences @ 198 aa
(ave. pairwise identity: 0.30)
New Hampshire format
(total tree length: 9.14)