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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00814 phylogeny
for restricted amino acid alignment


 
(((((((((((((((Q92JK6_RICCN/41-129,((Q8UC47_AGRT5/48-136,Q8FYI5_BRUSU/44-132),(Q89WW1_BRAJA/44-132,Q9ABZ9_CAUCR/52-137))),(((Q8KGA4_CHLTE/38-118,(((GCP_HELPY/40-129,Q9PMV5_CAMJE/43-124),(Q8EUQ9_MYCPE/54-139,((GCP_MYCGE/43-127,GCP_MYCPN/43-124),Q9PQ78_UREPA/43-131))),(Q98R92_MYCPU/39-125,GCP_AQUAE/40-128))),((Q8D283_WIGBR/40-126,(GCP_BUCAI/40-125,GCP_BUCBP/41-127)),((Q83C88_COXBU/41-127,(Q8EHD6_SHEON/40-126,((Q87B17_XYLFT/44-129,Q88A57_PSESM/40-125),(Q8CZR6_YERPE/45-131,GCP_HAEIN/40-126)))),(Q82XN2_NITEU/40-124,(Q8XX97_RALSO/40-126,Q9JVV8_NEIMA/40-126))))),(Q8A997_BACTN/40-120,Q9F0V0_RIEAN/41-129))),(((GCP_STRCO/46-131,(GCP_MYCLE/52-138,Q8FS07_COREF/44-127)),Q8G4D1_BIFLO/42-127),((((GCP_SYNY3/40-128,(Q8DLI9_SYNEL/40-128,Q8Z0I6_ANASP/40-128)),(Q8F661_LEPIN/40-125,Q9X7I3_PROMA/45-130)),(Q9WXZ2_THEMA/40-126,Q83FV5_TROWT/40-120)),(((((((Q8CNL9_STAEP/44-132,((Q831N0_ENTFA/48-136,((Q8DRH2_STRR6/43-131,Q8DXT9_STRA5/43-131),Q9CIR1_LACLA/43-131)),Q88YN0_LACPL/47-135)),Q9KFD3_BACHD/49-137),Q81IS8_BACCR/49-137),GCP_BACSU/46-134),Q8Y5I7_LISMO/48-136),Q8ESI6_OCEIH/49-137),((Q8RFX8_FUSNN/40-128,(Q8RC98_THETN/54-142,((Q891E7_CLOTE/44-132,Q97KL6_CLOAB/44-132),Q8XI89_CLOPE/43-131))),Q8GE05_HELMO/73-162))))),GCP_TREPA/40-128),((QRI7_YEAST/75-162,GCP_BORBU/39-127),(Q9Z8Z0_CHLPN/39-128,(Q822Y4_CHLCV/39-128,O84200_CHLTR/38-123)))),(O94710_SCHPO/85-174,(Q93170_CAEEL/62-151,((Q8BLB6_MOUSE/76-164,Q8JFR7_BRARE/64-152),(O22145_ARATH/123-212,Q9VWD6_DROME/64-151))))),((Q8ZV67_PYRAE/37-125,(Q975Q7_SULTO/40-128,Q9YCX7_AERPE/46-134)),((((O29153_ARCFU/36-122,(GCP_HALMA/44-139,Q9HNL6_HALN1/1-75)),((GCP_METJA/37-123,(Q978W6_THEVO/36-124,Q9HLA5_THEAC/36-124)),(Q8TVD4_METKA/38-126,(GCP_METTH/37-125,Q8PZ92_METMA/54-137)))),GCP_PYRHO/36-120),((((GCP_MOUSE/38-126,(O94637_SCHPO/46-134,YK18_YEAST/103-193)),(O49653_ARATH/42-130,Q9BL28_CAEEL/38-128)),Q9VV41_DROME/38-126),(Q8IJ99_PLAF7/52-140,Q8SQQ3_ENCCU/37-125))))),(Q9Z9F1_CHLPN/19-108,(Q823T4_CHLCV/19-108,O84347_CHLTR/17-106))),((((((Q8RCA0_THETN/24-111,(Q8RF02_FUSNN/25-99,(Q8XIF6_CLOPE/24-109,(Q891D5_CLOTE/24-109,Q97FA1_CLOAB/24-104)))),(((((O05516_BACSU/24-110,Q81IT0_BACCR/24-112),Q8Y5I5_LISMO/23-106),Q9KFD5_BACHD/24-112),Q8ESI8_OCEIH/24-109),((Q8CNL7_STAEP/24-112,Q8NVJ3_STAAW/33-121),((Q88YN3_LACPL/24-112,Q831M7_ENTFA/36-124),((Q8DRH4_STRR6/24-108,((Q8DVT2_STRMU/24-109,Q8K5W9_STRP3/25-112),Q8DXT7_STRA5/25-112)),Q9CIR4_LACLA/24-112))))),(Q9WZX7_THEMA/22-102,Q8GDZ8_HELMO/24-112)),((Q9AC10_CAUCR/23-108,(Q92HF7_RICCN/24-114,((Q89W94_BRAJA/26-112,Q98BK6_RHILO/26-106),((Q8FXU7_BRUSU/58-141,Q8UIE5_AGRT5/26-113),Q9KII1_RHIME/26-110)))),(Q9RWB3_DEIRA/34-121,(((Y378_MYCLE/29-114,(Q8FS09_COREF/26-111,Q8NSS6_CORGL/26-111)),(Q82DK4_STRAW/24-108,Q83FV4_TROWT/27-103)),Q8G4D3_BIFLO/201-275)))),(O83846_TREPA/24-113,(Q8A679_BACTN/25-111,Q8KG29_CHLTE/23-103))),(((Q82US9_NITEU/23-109,Q8XZM8_RALSO/24-109),((Q83BW6_COXBU/24-112,(Q886R7_PSESM/24-109,(Q87DD7_XYLFT/23-111,Q8P6N8_XANCP/23-111))),((Q8DFR6_VIBVU/25-110,Y388_HAEIN/26-111),(Q8EE04_SHEON/30-118,(Y301_BUCBP/25-111,(Y324_BUCAI/25-113,Y315_BUCAP/25-113)))))),Q9JW17_NEIMA/29-109))),((Q9PHP5_CAMJE/425-493,(O24889_HELPY/442-514,(((Q8KX20_SYNP2/429-505,(HYPF_SYNY3/427-496,Q8EF91_SHEON/452-537)),((((Q97KV6_CLOAB/425-494,Q8RDB0_THETN/428-501),(Q8YYZ7_ANASP/437-510,Q9AGW5_NOSPU/433-506)),(Q8GE55_HELMO/446-519,((((Q81BC7_BACCR/438-511,Q8GGQ6_STRAZ/438-511),Q8KBJ0_CHLTE/442-514),(Q825T2_STRAW/444-515,(HYPF_RHILV/428-500,((HYF2_ALCEU/456-532,HYF1_ALCEU/41-117),(Q89EX5_BRAJA/428-500,Q9ANP2_BRAJA/177-249))))),(Q93TY4_THIRO/457-531,(HYPF_RHOCA/417-491,Q9X7M0_RHOSH/437-507))))),Q8FEN3_ECOL6/444-514)),(((O28905_ARCFU/408-486,((O58636_PYRHO/427-504,Q8TXL4_METKA/431-510),(O27348_METTH/392-466,Y713_METJA/435-510))),(Q60190_METMA/429-500,Q8TII8_METAC/429-500)),O66902_AQUAE/426-499)))),(Q8DMP9_SYNEL/2-97,P72633_SYNY3/28-122))),((O25691_HELPY/6-87,Q9PIZ4_CAMJE/9-84),(O51203_BORBU/23-106,(Q98R91_MYCPU/26-112,O66494_AQUAE/24-100)))),Q8F9Z8_LEPIN/35-119),Q9PQH9_UREPA/27-116),Q8EWS2_MYCPE/28-114),Y208_MYCGE/31-117,Y208_MYCPN/31-117);
(((((((((((((((Q92JK6_RICCN/41-129:0.31395,((Q8UC47_AGRT5/48-136:0.15410,Q8FYI5_BRUSU/44-132:0.11053):0.08483,(Q89WW1_BRAJA/44-132:0.20506,Q9ABZ9_CAUCR/52-137:0.35770):0.19056):0.16242):0.29291,(((Q8KGA4_CHLTE/38-118:0.41551,(((GCP_HELPY/40-129:0.42326,Q9PMV5_CAMJE/43-124:0.23471):0.49066,(Q8EUQ9_MYCPE/54-139:0.30313,((GCP_MYCGE/43-127:0.26431,GCP_MYCPN/43-124:0.06121):0.28962,Q9PQ78_UREPA/43-131:0.36468):0.17037):0.13993):0.13497,(Q98R92_MYCPU/39-125:0.64947,GCP_AQUAE/40-128:0.36025):0.07766):0.05294):0.05982,((Q8D283_WIGBR/40-126:0.30594,(GCP_BUCAI/40-125:0.28123,GCP_BUCBP/41-127:0.29249):0.13968):0.20147,((Q83C88_COXBU/41-127:0.23838,(Q8EHD6_SHEON/40-126:0.12384,((Q87B17_XYLFT/44-129:0.19523,Q88A57_PSESM/40-125:0.17434):0.08188,(Q8CZR6_YERPE/45-131:0.11258,GCP_HAEIN/40-126:0.12736):0.07135):0.04011):0.05928):0.11792,(Q82XN2_NITEU/40-124:0.32068,(Q8XX97_RALSO/40-126:0.16509,Q9JVV8_NEIMA/40-126:0.28177):0.08913):0.09156):0.12119):0.13398):0.06502,(Q8A997_BACTN/40-120:0.24401,Q9F0V0_RIEAN/41-129:0.21668):0.21870):0.09348):0.03424,(((GCP_STRCO/46-131:0.13019,(GCP_MYCLE/52-138:0.22587,Q8FS07_COREF/44-127:0.18811):0.25276):0.10087,Q8G4D1_BIFLO/42-127:0.35754):0.18051,((((GCP_SYNY3/40-128:0.21640,(Q8DLI9_SYNEL/40-128:0.18378,Q8Z0I6_ANASP/40-128:0.17819):0.08108):0.05256,(Q8F661_LEPIN/40-125:0.62985,Q9X7I3_PROMA/45-130:0.41305):0.18925):0.18596,(Q9WXZ2_THEMA/40-126:0.45297,Q83FV5_TROWT/40-120:0.44109):0.14874):0.17830,(((((((Q8CNL9_STAEP/44-132:0.30069,((Q831N0_ENTFA/48-136:0.08473,((Q8DRH2_STRR6/43-131:0.08618,Q8DXT9_STRA5/43-131:0.19866):0.04557,Q9CIR1_LACLA/43-131:0.26789):0.07618):0.07574,Q88YN0_LACPL/47-135:0.09267):0.13703):0.05378,Q9KFD3_BACHD/49-137:0.13446):0.06863,Q81IS8_BACCR/49-137:0.07664):0.02311,GCP_BACSU/46-134:0.15461):0.02664,Q8Y5I7_LISMO/48-136:0.12928):0.06307,Q8ESI6_OCEIH/49-137:0.09285):0.12599,((Q8RFX8_FUSNN/40-128:0.26434,(Q8RC98_THETN/54-142:0.26249,((Q891E7_CLOTE/44-132:0.10100,Q97KL6_CLOAB/44-132:0.13878):0.06843,Q8XI89_CLOPE/43-131:0.07459):0.11231):0.11670):0.06707,Q8GE05_HELMO/73-162:0.27854):0.06686):0.09681):0.06603):0.05731):0.01843,GCP_TREPA/40-128:0.60931):0.09997,((QRI7_YEAST/75-162:0.61840,GCP_BORBU/39-127:0.40935):0.08667,(Q9Z8Z0_CHLPN/39-128:0.21383,(Q822Y4_CHLCV/39-128:0.12168,O84200_CHLTR/38-123:0.28873):0.03350):0.19829):0.09811):0.10335,(O94710_SCHPO/85-174:0.54833,(Q93170_CAEEL/62-151:0.47131,((Q8BLB6_MOUSE/76-164:0.15164,Q8JFR7_BRARE/64-152:0.27977):0.21017,(O22145_ARATH/123-212:0.60871,Q9VWD6_DROME/64-151:0.47919):0.10070):0.21874):0.15227):0.23022):0.10120,((Q8ZV67_PYRAE/37-125:0.44108,(Q975Q7_SULTO/40-128:0.33251,Q9YCX7_AERPE/46-134:0.38615):0.05663):0.15517,((((O29153_ARCFU/36-122:0.29616,(GCP_HALMA/44-139:0.19835,Q9HNL6_HALN1/1-75:0.10440):0.34751):0.05522,((GCP_METJA/37-123:0.21781,(Q978W6_THEVO/36-124:0.20143,Q9HLA5_THEAC/36-124:0.32133):0.18952):0.07153,(Q8TVD4_METKA/38-126:0.40816,(GCP_METTH/37-125:0.23181,Q8PZ92_METMA/54-137:0.28478):0.05551):0.06615):0.06825):0.07457,GCP_PYRHO/36-120:0.29075):0.06612,((((GCP_MOUSE/38-126:0.25199,(O94637_SCHPO/46-134:0.21084,YK18_YEAST/103-193:0.16044):0.03672):0.14201,(O49653_ARATH/42-130:0.29984,Q9BL28_CAEEL/38-128:0.24585):0.09905):0.05467,Q9VV41_DROME/38-126:0.14402):0.10691,(Q8IJ99_PLAF7/52-140:0.55723,Q8SQQ3_ENCCU/37-125:0.26886):0.05507):0.34574):0.00000):0.62768):0.36422,(Q9Z9F1_CHLPN/19-108:0.08389,(Q823T4_CHLCV/19-108:0.20997,O84347_CHLTR/17-106:0.34904):0.07711):0.87527):0.00000,((((((Q8RCA0_THETN/24-111:0.22826,(Q8RF02_FUSNN/25-99:0.53430,(Q8XIF6_CLOPE/24-109:0.12496,(Q891D5_CLOTE/24-109:0.19433,Q97FA1_CLOAB/24-104:0.11587):0.12961):0.26250):0.08182):0.06842,(((((O05516_BACSU/24-110:0.32211,Q81IT0_BACCR/24-112:0.11753):0.06140,Q8Y5I5_LISMO/23-106:0.26153):0.04750,Q9KFD5_BACHD/24-112:0.19126):0.09555,Q8ESI8_OCEIH/24-109:0.23289):0.12830,((Q8CNL7_STAEP/24-112:0.19831,Q8NVJ3_STAAW/33-121:0.19049):0.26572,((Q88YN3_LACPL/24-112:0.32771,Q831M7_ENTFA/36-124:0.26375):0.08998,((Q8DRH4_STRR6/24-108:0.18089,((Q8DVT2_STRMU/24-109:0.18680,Q8K5W9_STRP3/25-112:0.25408):0.08821,Q8DXT7_STRA5/25-112:0.17430):0.06815):0.06522,Q9CIR4_LACLA/24-112:0.36672):0.07530):0.06488):0.11144):0.20817):0.15826,(Q9WZX7_THEMA/22-102:0.94519,Q8GDZ8_HELMO/24-112:0.50865):0.07262):0.18370,((Q9AC10_CAUCR/23-108:0.53841,(Q92HF7_RICCN/24-114:0.92579,((Q89W94_BRAJA/26-112:0.36215,Q98BK6_RHILO/26-106:0.35589):0.10006,((Q8FXU7_BRUSU/58-141:0.29137,Q8UIE5_AGRT5/26-113:0.32618):0.13825,Q9KII1_RHIME/26-110:0.33864):0.19068):0.12071):0.01564):0.13435,(Q9RWB3_DEIRA/34-121:1.04132,(((Y378_MYCLE/29-114:0.38473,(Q8FS09_COREF/26-111:0.16857,Q8NSS6_CORGL/26-111:0.11958):0.15363):0.21086,(Q82DK4_STRAW/24-108:0.44832,Q83FV4_TROWT/27-103:0.92055):0.22009):0.10480,Q8G4D3_BIFLO/201-275:0.73538):0.13534):0.18102):0.09127):0.13906,(O83846_TREPA/24-113:1.23818,(Q8A679_BACTN/25-111:0.85530,Q8KG29_CHLTE/23-103:0.49091):0.08594):0.16268):0.06265,(((Q82US9_NITEU/23-109:0.28825,Q8XZM8_RALSO/24-109:0.54982):0.09238,((Q83BW6_COXBU/24-112:0.47675,(Q886R7_PSESM/24-109:0.26308,(Q87DD7_XYLFT/23-111:0.15865,Q8P6N8_XANCP/23-111:0.12805):0.36602):0.07780):0.08810,((Q8DFR6_VIBVU/25-110:0.14764,Y388_HAEIN/26-111:0.38906):0.12022,(Q8EE04_SHEON/30-118:0.33786,(Y301_BUCBP/25-111:0.53025,(Y324_BUCAI/25-113:0.28390,Y315_BUCAP/25-113:0.13695):0.23065):0.28614):0.06439):0.13574):0.11657):0.13468,Q9JW17_NEIMA/29-109:0.73009):0.12722):0.19578):0.18198,((Q9PHP5_CAMJE/425-493:0.84795,(O24889_HELPY/442-514:0.45156,(((Q8KX20_SYNP2/429-505:0.30950,(HYPF_SYNY3/427-496:0.28131,Q8EF91_SHEON/452-537:0.56109):0.19392):0.07813,((((Q97KV6_CLOAB/425-494:0.48558,Q8RDB0_THETN/428-501:0.31744):0.15004,(Q8YYZ7_ANASP/437-510:0.15414,Q9AGW5_NOSPU/433-506:0.12761):0.43487):0.11989,(Q8GE55_HELMO/446-519:0.77865,((((Q81BC7_BACCR/438-511:0.29766,Q8GGQ6_STRAZ/438-511:0.53168):0.05159,Q8KBJ0_CHLTE/442-514:0.57024):0.15699,(Q825T2_STRAW/444-515:0.62448,(HYPF_RHILV/428-500:0.40794,((HYF2_ALCEU/456-532:0.18094,HYF1_ALCEU/41-117:0.48137):0.27412,(Q89EX5_BRAJA/428-500:0.14552,Q9ANP2_BRAJA/177-249:0.21455):0.25724):0.04908):0.02062):0.13846):0.05122,(Q93TY4_THIRO/457-531:0.38971,(HYPF_RHOCA/417-491:0.27020,Q9X7M0_RHOSH/437-507:0.25160):0.23331):0.30882):0.14880):0.05811):0.07546,Q8FEN3_ECOL6/444-514:0.76101):0.05084):0.14781,(((O28905_ARCFU/408-486:0.44688,((O58636_PYRHO/427-504:0.39339,Q8TXL4_METKA/431-510:0.50408):0.13880,(O27348_METTH/392-466:0.43548,Y713_METJA/435-510:0.28697):0.18093):0.16813):0.15402,(Q60190_METMA/429-500:0.04835,Q8TII8_METAC/429-500:0.23062):0.45224):0.28214,O66902_AQUAE/426-499:0.31293):0.18404):0.16708):0.17738):1.79106,(Q8DMP9_SYNEL/2-97:0.55858,P72633_SYNY3/28-122:0.52491):0.56990):0.08532):0.28380,((O25691_HELPY/6-87:0.79186,Q9PIZ4_CAMJE/9-84:0.33663):0.65116,(O51203_BORBU/23-106:0.85039,(Q98R91_MYCPU/26-112:0.92916,O66494_AQUAE/24-100:0.74026):0.06598):0.03593):0.05069):0.32261,Q8F9Z8_LEPIN/35-119:0.96846):0.46212,Q9PQH9_UREPA/27-116:0.46179):0.25363,Q8EWS2_MYCPE/28-114:0.86317):0.56406,Y208_MYCGE/31-117:0.23452,Y208_MYCPN/31-117:0.14753);