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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00790 - VHS)
VHS domain
(Pfam reference: accession no. PF00790)
(Interpro reference: accession no. IPR002014)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
16 sequences @ 157 aa
(ave. pairwise identity: 0.26)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 12.59)
nucleotides
(available for above)
14 sequences @ 471 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 7.92)
amino acids, restricted set
(corresp. to available nt seqs)
14 sequences @ 157 aa
(ave. pairwise identity: 0.27)
New Hampshire format
(total tree length: 11.11)