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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00786 phylogeny
for nucleotide alignment


 
((((((((((((((((((SHK2_SCHPO/128-185,(CLA4_CANAL/230-288,(CLA4_YEAST/183-241,SKM1_YEAST/122-180))),(Q96UH9_MAGGR/185-243,(Q9C3Z3_PNECA/153-211,Q96VN8_CRYNE/95-153))),((Q9VEV1_DROME/19-76,PAK1_CAEEL/66-124),((O57318_XENLA/65-123,PAK3_HUMAN/69-142),Q24213_DROME/82-140))),(((Q8X1F1_CRYNV/69-127,Q8NK62_USTMA/236-294),SHK1_SCHPO/146-204),(O13431_CANAL/474-531,STE20_YEAST/336-394))),(((O00911_DICDI/355-412,Q23866_DICDI/815-871),Q9NAY0_DICDI/113-169),Q93107_ACACA/92-150)),(((Q9CAX8_ARATH/92-138,(Q9SJF6_ARATH/75-132,O82459_LOTJA/51-97)),O82460_LOTJA/41-87),(((Q8TB93_HUMAN/10-67,(Q8N4E1_HUMAN/10-67,PAK6_HUMAN/11-67)),PAKM_DROME/11-72),Q18637_CAEEL/35-94))),Q8MQE6_CAEEL/431-494),((WASL_RAT/199-258,(Q61078_MOUSE/239-298,Q9VAT0_DROME/233-294)),Q9GSG9_DICDI/172-231)),(Q9ZWB8_ARATH/16-81,((Q9LW58_ARATH/28-81,Q8LH90_ORYSA/30-79),Q9SIM6_ARATH/24-63))),(GIC1_YEAST/125-167,GIC2_YEAST/133-194)),Q95QM3_CAEEL/21-62),PR2_DROME/487-533),O45232_CAEEL/483-548),Q8RZV4_ORYSA/98-154),Q8TB51_HUMAN/22-79),MSE5_HUMAN/37-88),(O14613_HUMAN/29-87,O95353_HUMAN/30-86)),BORG4_HUMAN/26-85,BORG4_MOUSE/26-83);
((((((((((((((((((SHK2_SCHPO/128-185:0.47191,(CLA4_CANAL/230-288:0.20801,(CLA4_YEAST/183-241:0.16307,SKM1_YEAST/122-180:0.24406):0.10896):0.07388):0.06280,(Q96UH9_MAGGR/185-243:0.31087,(Q9C3Z3_PNECA/153-211:0.16570,Q96VN8_CRYNE/95-153:0.27943):0.10249):0.06434):0.08764,((Q9VEV1_DROME/19-76:0.54802,PAK1_CAEEL/66-124:0.18942):0.07280,((O57318_XENLA/65-123:0.28756,PAK3_HUMAN/69-142:0.10255):0.06863,Q24213_DROME/82-140:0.21904):0.07066):0.16783):0.07994,(((Q8X1F1_CRYNV/69-127:0.32938,Q8NK62_USTMA/236-294:0.32208):0.10732,SHK1_SCHPO/146-204:0.25776):0.08679,(O13431_CANAL/474-531:0.15531,STE20_YEAST/336-394:0.19492):0.10800):0.14907):0.08616,(((O00911_DICDI/355-412:0.18036,Q23866_DICDI/815-871:0.24755):0.08296,Q9NAY0_DICDI/113-169:0.26240):0.16200,Q93107_ACACA/92-150:0.48416):0.03615):0.09025,(((Q9CAX8_ARATH/92-138:0.10880,(Q9SJF6_ARATH/75-132:0.20112,O82459_LOTJA/51-97:0.23134):0.07069):0.23520,O82460_LOTJA/41-87:0.04409):0.66610,(((Q8TB93_HUMAN/10-67:0.20259,(Q8N4E1_HUMAN/10-67:0.16770,PAK6_HUMAN/11-67:0.33184):0.07018):0.17971,PAKM_DROME/11-72:0.30420):0.29116,Q18637_CAEEL/35-94:0.06754):0.42482):0.07102):0.14389,Q8MQE6_CAEEL/431-494:0.50692):0.05232,((WASL_RAT/199-258:0.19738,(Q61078_MOUSE/239-298:0.16489,Q9VAT0_DROME/233-294:0.41316):0.16980):0.34558,Q9GSG9_DICDI/172-231:0.08678):0.14000):0.16797,(Q9ZWB8_ARATH/16-81:0.28997,((Q9LW58_ARATH/28-81:0.35805,Q8LH90_ORYSA/30-79:0.33790):0.10862,Q9SIM6_ARATH/24-63:0.18581):0.07217):0.27745):0.09913,(GIC1_YEAST/125-167:0.17390,GIC2_YEAST/133-194:0.81877):0.50643):0.21902,Q95QM3_CAEEL/21-62:0.48259):0.52015,PR2_DROME/487-533:0.00000):0.54702,O45232_CAEEL/483-548:0.44709):0.33403,Q8RZV4_ORYSA/98-154:0.62169):0.12751,Q8TB51_HUMAN/22-79:0.23808):0.19212,MSE5_HUMAN/37-88:0.17884):0.08820,(O14613_HUMAN/29-87:0.16563,O95353_HUMAN/30-86:0.38992):0.48161):0.13046,BORG4_HUMAN/26-85:0.09178,BORG4_MOUSE/26-83:0.14179);