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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00786 phylogeny
for amino acid alignment


 
((((((((((((((((Q9VEV1_DROME/19-76,((O57318_XENLA/65-123,(PAK3_HUMAN/69-142,Q24213_DROME/82-140)),PAK1_CAEEL/66-124)),((Q96UH9_MAGGR/185-243,(Q9C3Z3_PNECA/153-211,Q96VN8_CRYNE/95-153)),(CLA4_CANAL/230-288,(CLA4_YEAST/183-241,SKM1_YEAST/122-180)))),(((Q8X1F1_CRYNV/69-127,SHK1_SCHPO/146-204),Q8NK62_USTMA/236-294),(O13431_CANAL/474-531,STE20_YEAST/336-394))),((SHK2_SCHPO/128-185,(O00911_DICDI/355-412,(Q9NAY0_DICDI/113-169,Q23866_DICDI/815-871))),Q93107_ACACA/92-150)),(((Q8TB93_HUMAN/10-67,(PAK6_HUMAN/11-67,Q8N4E1_HUMAN/10-67)),PAKM_DROME/11-72),Q18637_CAEEL/35-94)),((((WASL_RAT/199-258,Q9VAT0_DROME/233-294),Q61078_MOUSE/239-298),Q9GSG9_DICDI/172-231),Q8MQE6_CAEEL/431-494)),(((Q9CAX8_ARATH/92-138,Q9SJF6_ARATH/75-132),O82459_LOTJA/51-97),O82460_LOTJA/41-87)),YN03_CAEEL/101-151),(Q8RZV4_ORYSA/98-154,((Q9ZWB8_ARATH/16-81,(Q9LW58_ARATH/28-81,Q9SIM6_ARATH/24-63)),Q8LH90_ORYSA/30-79))),Q95QM3_CAEEL/21-62),(O14613_HUMAN/29-87,O95353_HUMAN/30-86)),(GIC1_YEAST/125-167,GIC2_YEAST/133-194)),(O45232_CAEEL/483-548,PR2_DROME/487-533)),Q8TB51_HUMAN/22-79),MSE5_HUMAN/37-88),BORG4_HUMAN/26-85,BORG4_MOUSE/26-83);
((((((((((((((((Q9VEV1_DROME/19-76:0.76790,((O57318_XENLA/65-123:0.37083,(PAK3_HUMAN/69-142:0.12135,Q24213_DROME/82-140:0.12458):0.06129):0.00000,PAK1_CAEEL/66-124:0.24838):0.14203):0.05557,((Q96UH9_MAGGR/185-243:0.19140,(Q9C3Z3_PNECA/153-211:0.06723,Q96VN8_CRYNE/95-153:0.19937):0.09498):0.06239,(CLA4_CANAL/230-288:0.19786,(CLA4_YEAST/183-241:0.18821,SKM1_YEAST/122-180:0.22682):0.12983):0.14665):0.19893):0.08328,(((Q8X1F1_CRYNV/69-127:0.53369,SHK1_SCHPO/146-204:0.25763):0.12364,Q8NK62_USTMA/236-294:0.12799):0.11076,(O13431_CANAL/474-531:0.17725,STE20_YEAST/336-394:0.17344):0.13569):0.22245):0.09070,((SHK2_SCHPO/128-185:0.37012,(O00911_DICDI/355-412:0.29248,(Q9NAY0_DICDI/113-169:0.36829,Q23866_DICDI/815-871:0.28872):0.07437):0.25356):0.08832,Q93107_ACACA/92-150:0.65311):0.07533):0.08906,(((Q8TB93_HUMAN/10-67:0.05907,(PAK6_HUMAN/11-67:0.39121,Q8N4E1_HUMAN/10-67:0.22873):0.07145):0.17415,PAKM_DROME/11-72:0.38748):0.28707,Q18637_CAEEL/35-94:0.00000):0.90861):0.12295,((((WASL_RAT/199-258:0.20120,Q9VAT0_DROME/233-294:0.58776):0.11947,Q61078_MOUSE/239-298:0.07922):0.54502,Q9GSG9_DICDI/172-231:0.00533):0.51736,Q8MQE6_CAEEL/431-494:0.91275):0.28223):0.18944,(((Q9CAX8_ARATH/92-138:0.12035,Q9SJF6_ARATH/75-132:0.29464):0.08792,O82459_LOTJA/51-97:0.18158):0.29091,O82460_LOTJA/41-87:0.00000):1.22009):0.42074,YN03_CAEEL/101-151:0.57114):0.08229,(Q8RZV4_ORYSA/98-154:0.81903,((Q9ZWB8_ARATH/16-81:0.68274,(Q9LW58_ARATH/28-81:0.55547,Q9SIM6_ARATH/24-63:0.16330):0.18235):0.04046,Q8LH90_ORYSA/30-79:0.12281):0.38339):0.63562):0.37355,Q95QM3_CAEEL/21-62:0.44494):0.32141,(O14613_HUMAN/29-87:0.47798,O95353_HUMAN/30-86:0.29346):0.93445):0.38958,(GIC1_YEAST/125-167:0.69608,GIC2_YEAST/133-194:0.66265):0.79519):0.19775,(O45232_CAEEL/483-548:0.72286,PR2_DROME/487-533:0.70888):0.05680):0.45416,Q8TB51_HUMAN/22-79:0.63715):0.00486,MSE5_HUMAN/37-88:0.27879):0.32784,BORG4_HUMAN/26-85:0.00000,BORG4_MOUSE/26-83:0.25159);