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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00781 phylogeny
for restricted amino acid alignment


 
((((((((((Q82KT9_STRAW/12-140,Y510_MYCBO/72-200),Q82W90_NITEU/7-134),((((((Q87IB3_VIBPA/3-130,((Q8PD82_XANCP/5-130,((Q87ZA2_PSESM/6-125,Q88L12_PSEPK/59-181),Q9HZI3_PSEAE/6-128)),(Q8FFZ2_ECOL6/6-132,Q8ZCV4_YERPE/3-129))),(Q98I19_RHILO/35-169,Q87TI4_VIBPA/240-363)),(((Q7MUX7_PORGI/2-127,Q8A9E4_BACTN/3-128),Q8R6L5_THETN/1-126),((Q839R8_ENTFA/4-131,(Q8Y497_LISMO/4-132,(((Q81IN1_BACCR/4-126,(Q99SY8_STAAM/4-132,(Q8ES76_OCEIH/3-131,Q8Y6D4_LISMO/4-133))),((Q8E5W0_STRA3/6-135,(Q88XP5_LACPL/4-133,((Q9CIE3_LACLA/3-135,Q8DT50_STRMU/7-131),Q837V1_ENTFA/3-127))),O31502_BACSU/3-131)),Q9KF21_BACHD/3-130))),((Q830X4_ENTFA/3-148,Q8Y8W8_LISMO/3-130),Q97QZ6_STRPN/3-130)))),((Q816L3_BACCR/8-134,Q8ES48_OCEIH/3-126),Q9KC00_BACHD/4-128)),(Q8YT45_ANASP/28-150,(Q7NHQ5_GLOVI/4-128,(Y036_SYNY3/126-267,(Q7NFK6_GLOVI/25-155,Q8YVU8_ANASP/4-134))))),((BMRU_BACSU/5-132,(Q8CQ05_STAEP/7-139,Q8NXN1_STAAW/7-138)),((Q8XKR6_CLOPE/3-130,(Q898U2_CLOTE/3-130,Q97L83_CLOAB/3-130)),(Q8K7G9_STRP3/3-133,(Q8DZ02_STRA5/3-133,Q9CEU7_LACLA/3-134)))))),((O82359_ARATH/53-194,(Q9RU35_DEIRA/21-149,(O44334_DROME/205-332,(Q7Z299_CAEEL/18-143,(((Q8VZG1_ARATH/91-237,Q9FHH4_ARATH/90-236),(Q7XQT2_ORYSA/45-188,(Q8LE70_ARATH/40-181,Q9FVC9_LYCES/40-183))),(Q8I8F4_DICDI/334-467,((((Q20320_CAEEL/244-369,Q8NG53_HUMAN/321-446),(KDGE_HUMAN/219-350,(KDG1_ARATH/361-490,Q9FFN7_ARATH/342-471))),(Q17860_CAEEL/548-676,Q8MUB2_APLCA/403-531)),((KDGZ_RAT/296-420,KDGE_DROME/809-935),(((KDGA_MOUSE/372-495,KDGG_HUMAN/434-558),KDG3_CAEEL/427-552),Q8MKP0_DROME/361-485))))))))),((Q9RUM1_DEIRA/11-127,(((Q82DG7_STRAW/133-259,Q8CJN4_STRCO/135-258),(P72262_RHOER/199-320,(((Q82NY8_STRAW/196-327,(Q82LY1_STRAW/212-325,Q9ZC02_STRCO/213-325)),Q825G8_STRAW/196-328),P72269_RHOER/199-326))),(((Q8UGN5_AGRT5/25-154,Q92R72_RHIME/2-130),Q98FN7_RHILO/63-205),Q98NZ1_RHILO/168-300))),((Q8KC59_CHLTE/8-129,(Q9RJ98_STRCO/3-124,(Q828H5_STRAW/4-131,O53526_MYCTU/13-145))),(Q9RS93_DEIRA/20-138,Q8G3W8_BIFLO/116-238))))),((Q8FMN3_COREF/5-141,Q8NMJ5_CORGL/9-145),(O05848_MYCTU/2-130,((Q9F3M0_STRCO/2-143,Q840Q1_STRGR/46-174),Q82IW7_STRAW/2-133)))),((Q830V8_ENTFA/4-144,(O34799_BACSU/3-130,Q88VA8_LACPL/4-176)),((Q88WD7_LACPL/4-138,(Q8E7Z2_STRA3/2-129,Q9CEN8_LACLA/2-173)),(Q7WU58_9THEM/26-155,Q89ZQ4_BACTN/7-138)))),((Q7ZW00_BRARE/65-196,Q9NP48_HUMAN/62-193),Q9VL10_DROME/56-181)),(((Q7XN57_ORYSA/228-361,Q9FHL3_ARATH/249-382),(Q84S01_ORYSA/99-233,Q94HY9_ORYSA/234-367)),(((CERK1_MOUSE/132-277,CERK1_HUMAN/132-278),(Q7PRA8_ANOGA/4-145,Q95S15_DROME/5-150)),(O14159_SCHPO/107-265,Q7S9Y1_NEUCR/163-325)))),((((Q7QIP4_ANOGA/159-295,Q18425_CAEEL/87-224),(Q9VZW0_DROME/216-357,Q9VYY8_DROME/190-333)),((O88885_MOUSE/138-275,Q8N632_HUMAN/102-239),(SPHK2_MOUSE/147-284,SPHK2_HUMAN/182-319))),(Q8H350_ORYSA/132-250,(O65419_ARATH/379-515,(O65419_ARATH/909-1042,Q8L7L1_ARATH/120-252))))),Q06147_YEAST/270-410,Q12246_YEAST/228-368);
((((((((((Q82KT9_STRAW/12-140:0.93586,Y510_MYCBO/72-200:2.17984):0.15437,Q82W90_NITEU/7-134:1.40554):0.42836,((((((Q87IB3_VIBPA/3-130:0.67861,((Q8PD82_XANCP/5-130:0.52916,((Q87ZA2_PSESM/6-125:0.28603,Q88L12_PSEPK/59-181:0.10543):0.19907,Q9HZI3_PSEAE/6-128:0.13687):0.39296):0.16982,(Q8FFZ2_ECOL6/6-132:0.30663,Q8ZCV4_YERPE/3-129:0.25550):0.08292):0.07819):0.38845,(Q98I19_RHILO/35-169:0.63270,Q87TI4_VIBPA/240-363:1.07605):0.26251):0.16652,(((Q7MUX7_PORGI/2-127:0.56385,Q8A9E4_BACTN/3-128:0.38054):0.28301,Q8R6L5_THETN/1-126:0.58182):0.21913,((Q839R8_ENTFA/4-131:0.83829,(Q8Y497_LISMO/4-132:0.71777,(((Q81IN1_BACCR/4-126:0.34664,(Q99SY8_STAAM/4-132:0.43436,(Q8ES76_OCEIH/3-131:0.22652,Q8Y6D4_LISMO/4-133:0.31245):0.10548):0.08610):0.09990,((Q8E5W0_STRA3/6-135:0.32017,(Q88XP5_LACPL/4-133:0.20067,((Q9CIE3_LACLA/3-135:0.48557,Q8DT50_STRMU/7-131:0.09708):0.13107,Q837V1_ENTFA/3-127:0.25764):0.16001):0.07974):0.28524,O31502_BACSU/3-131:0.17486):0.08926):0.01030,Q9KF21_BACHD/3-130:0.34801):0.16640):0.12780):0.09039,((Q830X4_ENTFA/3-148:0.43025,Q8Y8W8_LISMO/3-130:0.36302):0.14408,Q97QZ6_STRPN/3-130:0.62526):0.14929):0.09383):0.14071):0.16123,((Q816L3_BACCR/8-134:0.27081,Q8ES48_OCEIH/3-126:0.75449):0.16476,Q9KC00_BACHD/4-128:0.72600):0.18976):0.10522,(Q8YT45_ANASP/28-150:0.55222,(Q7NHQ5_GLOVI/4-128:0.47009,(Y036_SYNY3/126-267:0.48853,(Q7NFK6_GLOVI/25-155:0.42367,Q8YVU8_ANASP/4-134:0.43889):0.13235):0.36999):0.36433):0.24431):0.06383,((BMRU_BACSU/5-132:0.48678,(Q8CQ05_STAEP/7-139:0.16579,Q8NXN1_STAAW/7-138:0.27784):0.68053):0.23025,((Q8XKR6_CLOPE/3-130:0.33591,(Q898U2_CLOTE/3-130:0.13681,Q97L83_CLOAB/3-130:0.27385):0.22125):0.80747,(Q8K7G9_STRP3/3-133:0.31080,(Q8DZ02_STRA5/3-133:0.61144,Q9CEU7_LACLA/3-134:0.55096):0.06437):0.49542):0.07974):0.42581):0.14201):0.00997,((O82359_ARATH/53-194:0.67957,(Q9RU35_DEIRA/21-149:1.16811,(O44334_DROME/205-332:0.40150,(Q7Z299_CAEEL/18-143:0.61608,(((Q8VZG1_ARATH/91-237:0.30475,Q9FHH4_ARATH/90-236:0.16882):0.46811,(Q7XQT2_ORYSA/45-188:0.15415,(Q8LE70_ARATH/40-181:0.12465,Q9FVC9_LYCES/40-183:0.14946):0.06697):0.45942):0.27971,(Q8I8F4_DICDI/334-467:0.61380,((((Q20320_CAEEL/244-369:0.33999,Q8NG53_HUMAN/321-446:0.22295):0.22472,(KDGE_HUMAN/219-350:0.59996,(KDG1_ARATH/361-490:0.20980,Q9FFN7_ARATH/342-471:0.18975):0.30240):0.05786):0.09568,(Q17860_CAEEL/548-676:0.19189,Q8MUB2_APLCA/403-531:0.14731):0.39464):0.08179,((KDGZ_RAT/296-420:0.23951,KDGE_DROME/809-935:0.28929):0.16013,(((KDGA_MOUSE/372-495:0.18449,KDGG_HUMAN/434-558:0.20990):0.08879,KDG3_CAEEL/427-552:0.26046):0.04217,Q8MKP0_DROME/361-485:0.29180):0.12175):0.06333):0.02765):0.08240):0.25145):0.12877):0.42360):0.29552):0.19985,((Q9RUM1_DEIRA/11-127:0.69192,(((Q82DG7_STRAW/133-259:0.69156,Q8CJN4_STRCO/135-258:0.26594):0.43526,(P72262_RHOER/199-320:0.34000,(((Q82NY8_STRAW/196-327:0.66446,(Q82LY1_STRAW/212-325:0.51895,Q9ZC02_STRCO/213-325:0.16024):0.28354):0.22330,Q825G8_STRAW/196-328:0.50957):0.10635,P72269_RHOER/199-326:0.56308):0.16952):0.40641):0.13254,(((Q8UGN5_AGRT5/25-154:0.21306,Q92R72_RHIME/2-130:0.57074):0.30312,Q98FN7_RHILO/63-205:0.62793):0.36825,Q98NZ1_RHILO/168-300:0.64834):0.44785):0.12634):0.35308,((Q8KC59_CHLTE/8-129:0.86880,(Q9RJ98_STRCO/3-124:0.83554,(Q828H5_STRAW/4-131:0.69065,O53526_MYCTU/13-145:0.79605):0.16352):0.19548):0.03702,(Q9RS93_DEIRA/20-138:1.06752,Q8G3W8_BIFLO/116-238:0.65917):0.24623):0.12951):0.15753):0.10775):0.16602,((Q8FMN3_COREF/5-141:0.52770,Q8NMJ5_CORGL/9-145:0.38850):0.32220,(O05848_MYCTU/2-130:0.58732,((Q9F3M0_STRCO/2-143:0.23391,Q840Q1_STRGR/46-174:0.14992):0.03530,Q82IW7_STRAW/2-133:0.10556):0.32017):0.23140):0.32018):0.05473,((Q830V8_ENTFA/4-144:0.66477,(O34799_BACSU/3-130:0.79356,Q88VA8_LACPL/4-176:0.76266):0.08867):0.25463,((Q88WD7_LACPL/4-138:0.98135,(Q8E7Z2_STRA3/2-129:0.89660,Q9CEN8_LACLA/2-173:0.69762):0.28739):0.06696,(Q7WU58_9THEM/26-155:0.81459,Q89ZQ4_BACTN/7-138:0.97879):0.21092):0.12641):0.18646):0.25377,((Q7ZW00_BRARE/65-196:0.07510,Q9NP48_HUMAN/62-193:0.52156):0.44059,Q9VL10_DROME/56-181:0.89201):0.32167):0.15687,(((Q7XN57_ORYSA/228-361:0.10810,Q9FHL3_ARATH/249-382:0.20528):0.13542,(Q84S01_ORYSA/99-233:0.36854,Q94HY9_ORYSA/234-367:0.04922):0.06280):0.56495,(((CERK1_MOUSE/132-277:0.18555,CERK1_HUMAN/132-278:0.16543):0.25529,(Q7PRA8_ANOGA/4-145:0.58989,Q95S15_DROME/5-150:0.36457):0.29191):0.49907,(O14159_SCHPO/107-265:0.56851,Q7S9Y1_NEUCR/163-325:0.63497):0.27434):0.08124):0.19531):0.08459,((((Q7QIP4_ANOGA/159-295:0.46448,Q18425_CAEEL/87-224:0.94175):0.16717,(Q9VZW0_DROME/216-357:0.34472,Q9VYY8_DROME/190-333:0.32620):0.46736):0.14009,((O88885_MOUSE/138-275:0.21738,Q8N632_HUMAN/102-239:0.20259):0.21549,(SPHK2_MOUSE/147-284:0.22322,SPHK2_HUMAN/182-319:0.30315):0.26095):0.31752):0.24008,(Q8H350_ORYSA/132-250:0.52122,(O65419_ARATH/379-515:0.32634,(O65419_ARATH/909-1042:0.33583,Q8L7L1_ARATH/120-252:0.05088):0.15728):0.23778):0.13414):0.10807):0.75417,Q06147_YEAST/270-410:0.13944,Q12246_YEAST/228-368:0.14485);