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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00781 phylogeny
for amino acid alignment


 
(((((((((Q82W90_NITEU/7-134,(Y510_MYCBO/72-200,Q82KT9_STRAW/12-140)),((O82359_ARATH/53-194,(Q9RU35_DEIRA/21-149,(O44334_DROME/205-332,(Q7Z299_CAEEL/18-143,(((Q8VZG1_ARATH/91-237,Q9FHH4_ARATH/90-236),(Q7XQT2_ORYSA/45-188,(Q8LE70_ARATH/40-181,Q9FVC9_LYCES/40-183))),(Q8I8F4_DICDI/334-467,(((KDGZ_RAT/296-420,KDGE_DROME/809-935),KDGM_CAEEL/418-545),((((KDG1_ARATH/361-490,Q9FFN7_ARATH/342-471),(KDGE_HUMAN/219-350,(Q20320_CAEEL/244-369,Q8NG53_HUMAN/321-446))),(KDGT_HUMAN/588-715,(Q17860_CAEEL/548-676,Q8MUB2_APLCA/403-531))),((KDG3_CAEEL/427-552,Q8MKP0_DROME/361-485),(KDGA_MOUSE/372-495,KDGG_HUMAN/434-558)))))))))),(((Q8KC59_CHLTE/8-129,(Q9RJ98_STRCO/3-124,(Q828H5_STRAW/4-131,O53526_MYCTU/13-145))),(Q9RS93_DEIRA/20-138,Q8G3W8_BIFLO/116-238)),((Q9RUM1_DEIRA/11-127,(((Q82DG7_STRAW/133-259,Q8CJN4_STRCO/135-258),(P72262_RHOER/199-320,(((Q82NY8_STRAW/196-327,(Q82LY1_STRAW/212-325,Q9ZC02_STRCO/213-325)),Q825G8_STRAW/196-328),P72269_RHOER/199-326))),(((Q8UGN5_AGRT5/25-154,Q92R72_RHIME/2-130),Q98FN7_RHILO/63-205),Q98NZ1_RHILO/168-300))),(Q7NHQ5_GLOVI/4-128,(Y036_SYNY3/126-267,(Q7NFK6_GLOVI/25-155,Q8YVU8_ANASP/4-134))))))),(((((Q87IB3_VIBPA/3-130,((Q8PD82_XANCP/5-130,((Q87ZA2_PSESM/6-125,Q88L12_PSEPK/59-181),Q9HZI3_PSEAE/6-128)),(Q8FFZ2_ECOL6/6-132,Q8ZCV4_YERPE/3-129))),(Q98I19_RHILO/35-169,Q87TI4_VIBPA/240-363)),(((Q7MUX7_PORGI/2-127,Q8A9E4_BACTN/3-128),Q8R6L5_THETN/1-126),((Q839R8_ENTFA/4-131,(Q8Y497_LISMO/4-132,(((Q81IN1_BACCR/4-126,(Q99SY8_STAAM/4-132,(Q8ES76_OCEIH/3-131,Q8Y6D4_LISMO/4-133))),((Q8E5W0_STRA3/6-135,(Q88XP5_LACPL/4-133,((Q9CIE3_LACLA/3-135,Q8DT50_STRMU/7-131),Q837V1_ENTFA/3-127))),O31502_BACSU/3-131)),Q9KF21_BACHD/3-130))),((Q830X4_ENTFA/3-148,Q8Y8W8_LISMO/3-130),Q97QZ6_STRPN/3-130)))),((Q816L3_BACCR/8-134,Q8ES48_OCEIH/3-126),Q9KC00_BACHD/4-128)),(Q8YT45_ANASP/28-150,((BMRU_BACSU/5-132,(Q8CQ05_STAEP/7-139,Q8NXN1_STAAW/7-138)),((Q8XKR6_CLOPE/3-130,(Q898U2_CLOTE/3-130,Q97L83_CLOAB/3-130)),(Q8K7G9_STRP3/3-133,(Q8DZ02_STRA5/3-133,Q9CEU7_LACLA/3-134))))))),((Q8FMN3_COREF/5-141,Q8NMJ5_CORGL/9-145),(O05848_MYCTU/2-130,((Q82IW7_STRAW/2-133,Q840Q1_STRGR/46-174),Q9F3M0_STRCO/2-143)))),((Q830V8_ENTFA/4-144,(O34799_BACSU/3-130,Q88VA8_LACPL/4-176)),((Q88WD7_LACPL/4-138,(Q8E7Z2_STRA3/2-129,Q9CEN8_LACLA/2-173)),(Q7WU58_9THEM/26-155,Q89ZQ4_BACTN/7-138)))),((Q7ZW00_BRARE/65-196,Q9NP48_HUMAN/62-193),Q9VL10_DROME/56-181)),((((CERK1_MOUSE/132-277,CERK1_HUMAN/132-278),(Q7PRA8_ANOGA/4-145,Q95S15_DROME/5-150)),(O14159_SCHPO/107-265,Q7S9Y1_NEUCR/163-325)),(Q84S01_ORYSA/99-233,((Q7XN57_ORYSA/228-361,Q9FHL3_ARATH/249-382),Q94HY9_ORYSA/234-367)))),((((Q9VZW0_DROME/216-357,Q9VYY8_DROME/190-333),(Q7QIP4_ANOGA/159-295,Q18425_CAEEL/87-224)),((O88885_MOUSE/138-275,Q8N632_HUMAN/102-239),(SPHK2_MOUSE/147-284,SPHK2_HUMAN/182-319))),(Q8H350_ORYSA/132-250,(O65419_ARATH/379-515,(O65419_ARATH/909-1042,Q8L7L1_ARATH/120-252))))),Q06147_YEAST/270-410,Q12246_YEAST/228-368);
(((((((((Q82W90_NITEU/7-134:1.32954,(Y510_MYCBO/72-200:2.20567,Q82KT9_STRAW/12-140:0.90536):0.24076):0.37212,((O82359_ARATH/53-194:0.61953,(Q9RU35_DEIRA/21-149:1.14482,(O44334_DROME/205-332:0.44460,(Q7Z299_CAEEL/18-143:0.59776,(((Q8VZG1_ARATH/91-237:0.29829,Q9FHH4_ARATH/90-236:0.17813):0.45978,(Q7XQT2_ORYSA/45-188:0.15180,(Q8LE70_ARATH/40-181:0.11998,Q9FVC9_LYCES/40-183:0.15180):0.07162):0.45783):0.26599,(Q8I8F4_DICDI/334-467:0.57876,(((KDGZ_RAT/296-420:0.22849,KDGE_DROME/809-935:0.29645):0.02384,KDGM_CAEEL/418-545:0.37438):0.13030,((((KDG1_ARATH/361-490:0.21349,Q9FFN7_ARATH/342-471:0.18758):0.28775,(KDGE_HUMAN/219-350:0.58824,(Q20320_CAEEL/244-369:0.33502,Q8NG53_HUMAN/321-446:0.22322):0.23025):0.07450):0.08272,(KDGT_HUMAN/588-715:0.24997,(Q17860_CAEEL/548-676:0.23232,Q8MUB2_APLCA/403-531:0.10700):0.25997):0.18078):0.12769,((KDG3_CAEEL/427-552:0.24669,Q8MKP0_DROME/361-485:0.31749):0.04692,(KDGA_MOUSE/372-495:0.17306,KDGG_HUMAN/434-558:0.21563):0.07324):0.11699):0.09299):0.04533):0.08337):0.25846):0.09653):0.42227):0.32849):0.21111,(((Q8KC59_CHLTE/8-129:0.87756,(Q9RJ98_STRCO/3-124:0.82606,(Q828H5_STRAW/4-131:0.69395,O53526_MYCTU/13-145:0.79101):0.16173):0.18794):0.05751,(Q9RS93_DEIRA/20-138:1.05600,Q8G3W8_BIFLO/116-238:0.63998):0.22416):0.16788,((Q9RUM1_DEIRA/11-127:0.64178,(((Q82DG7_STRAW/133-259:0.66226,Q8CJN4_STRCO/135-258:0.28785):0.41180,(P72262_RHOER/199-320:0.35313,(((Q82NY8_STRAW/196-327:0.65248,(Q82LY1_STRAW/212-325:0.51983,Q9ZC02_STRCO/213-325:0.15847):0.29525):0.22771,Q825G8_STRAW/196-328:0.50507):0.11695,P72269_RHOER/199-326:0.54529):0.16169):0.41849):0.16404,(((Q8UGN5_AGRT5/25-154:0.22646,Q92R72_RHIME/2-130:0.55426):0.28880,Q98FN7_RHILO/63-205:0.63415):0.34203,Q98NZ1_RHILO/168-300:0.67492):0.43933):0.15944):0.26344,(Q7NHQ5_GLOVI/4-128:0.64034,(Y036_SYNY3/126-267:0.49848,(Q7NFK6_GLOVI/25-155:0.43425,Q8YVU8_ANASP/4-134:0.42801):0.15360):0.18762):0.38000):0.09148):0.18295):0.03244):0.07401,(((((Q87IB3_VIBPA/3-130:0.66741,((Q8PD82_XANCP/5-130:0.52472,((Q87ZA2_PSESM/6-125:0.28528,Q88L12_PSEPK/59-181:0.10569):0.19760,Q9HZI3_PSEAE/6-128:0.13821):0.39480):0.16858,(Q8FFZ2_ECOL6/6-132:0.30319,Q8ZCV4_YERPE/3-129:0.25832):0.08478):0.08471):0.40072,(Q98I19_RHILO/35-169:0.62911,Q87TI4_VIBPA/240-363:1.07739):0.24275):0.16392,(((Q7MUX7_PORGI/2-127:0.56482,Q8A9E4_BACTN/3-128:0.37795):0.28100,Q8R6L5_THETN/1-126:0.58291):0.22015,((Q839R8_ENTFA/4-131:0.83167,(Q8Y497_LISMO/4-132:0.71607,(((Q81IN1_BACCR/4-126:0.34695,(Q99SY8_STAAM/4-132:0.43503,(Q8ES76_OCEIH/3-131:0.22380,Q8Y6D4_LISMO/4-133:0.31417):0.10575):0.08370):0.09791,((Q8E5W0_STRA3/6-135:0.31905,(Q88XP5_LACPL/4-133:0.20065,((Q9CIE3_LACLA/3-135:0.48500,Q8DT50_STRMU/7-131:0.09692):0.13109,Q837V1_ENTFA/3-127:0.25684):0.15971):0.07999):0.28445,O31502_BACSU/3-131:0.17531):0.09170):0.01006,Q9KF21_BACHD/3-130:0.34509):0.16786):0.12593):0.09554,((Q830X4_ENTFA/3-148:0.43042,Q8Y8W8_LISMO/3-130:0.36308):0.14563,Q97QZ6_STRPN/3-130:0.62479):0.15231):0.08693):0.16037):0.15160,((Q816L3_BACCR/8-134:0.29516,Q8ES48_OCEIH/3-126:0.73248):0.14708,Q9KC00_BACHD/4-128:0.72709):0.19214):0.12792,(Q8YT45_ANASP/28-150:0.76285,((BMRU_BACSU/5-132:0.48980,(Q8CQ05_STAEP/7-139:0.16701,Q8NXN1_STAAW/7-138:0.27561):0.66707):0.20665,((Q8XKR6_CLOPE/3-130:0.33763,(Q898U2_CLOTE/3-130:0.13525,Q97L83_CLOAB/3-130:0.27425):0.21925):0.77863,(Q8K7G9_STRP3/3-133:0.30351,(Q8DZ02_STRA5/3-133:0.61194,Q9CEU7_LACLA/3-134:0.54781):0.07139):0.52332):0.08719):0.37148):0.07454):0.14084):0.18323,((Q8FMN3_COREF/5-141:0.50985,Q8NMJ5_CORGL/9-145:0.40490):0.32149,(O05848_MYCTU/2-130:0.55263,((Q82IW7_STRAW/2-133:0.12555,Q840Q1_STRGR/46-174:0.15928):0.03868,Q9F3M0_STRCO/2-143:0.20630):0.30862):0.25680):0.32047):0.06016,((Q830V8_ENTFA/4-144:0.66164,(O34799_BACSU/3-130:0.79142,Q88VA8_LACPL/4-176:0.75876):0.09144):0.25606,((Q88WD7_LACPL/4-138:0.97262,(Q8E7Z2_STRA3/2-129:0.89457,Q9CEN8_LACLA/2-173:0.69422):0.28521):0.05824,(Q7WU58_9THEM/26-155:0.82181,Q89ZQ4_BACTN/7-138:0.96269):0.20732):0.12788):0.18547):0.24814,((Q7ZW00_BRARE/65-196:0.06761,Q9NP48_HUMAN/62-193:0.52607):0.43884,Q9VL10_DROME/56-181:0.90564):0.32670):0.16363,((((CERK1_MOUSE/132-277:0.17875,CERK1_HUMAN/132-278:0.17113):0.27161,(Q7PRA8_ANOGA/4-145:0.58484,Q95S15_DROME/5-150:0.36936):0.27755):0.50097,(O14159_SCHPO/107-265:0.59548,Q7S9Y1_NEUCR/163-325:0.60884):0.28169):0.10930,(Q84S01_ORYSA/99-233:0.24770,((Q7XN57_ORYSA/228-361:0.10507,Q9FHL3_ARATH/249-382:0.20858):0.19163,Q94HY9_ORYSA/234-367:0.04459):0.13391):0.54324):0.14360):0.08875,((((Q9VZW0_DROME/216-357:0.34611,Q9VYY8_DROME/190-333:0.32424):0.47254,(Q7QIP4_ANOGA/159-295:0.45727,Q18425_CAEEL/87-224:0.94920):0.16202):0.14250,((O88885_MOUSE/138-275:0.21201,Q8N632_HUMAN/102-239:0.20771):0.21177,(SPHK2_MOUSE/147-284:0.22820,SPHK2_HUMAN/182-319:0.29795):0.26351):0.31400):0.23491,(Q8H350_ORYSA/132-250:0.52824,(O65419_ARATH/379-515:0.34311,(O65419_ARATH/909-1042:0.33552,Q8L7L1_ARATH/120-252:0.05186):0.13641):0.23854):0.14538):0.09400):0.74764,Q06147_YEAST/270-410:0.14032,Q12246_YEAST/228-368:0.14350);