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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00772 phylogeny
for restricted amino acid alignment


 
(((Q9X258_THEMA/3-105,Q9AQH7_STAAU/9-111),(Q9Z693_THEAQ/5-108,Q9RWW6_DEIRA/7-109)),((((Q05074_STRCL/9-113,(DNAB_MYCTU/23-125,Q9X8U7_STRCO/55-157)),(Q9CHI5_LACLA/9-111,(Q99XJ1_STRPY/11-113,Q97N64_STRPN/9-111))),((DNAC_BACSU/9-111,Q9X4C9_BACST/9-111),Q9K5Q9_BACHD/9-111)),(DNAB_TREPA/15-117,DNAB_RHOMR/45-147)),((((((DNAB_MYCPN/13-121,DNAB_HELPJ/6-103),((((GP1D_CHLPS/7-108,Q46273_CHLPN/6-107),GP1D_CHLTR/7-109),Q9PHV3_CAMJE/3-96),Q9MCP7_BPHK7/3-95)),((O67450_AQUAE/6-108,Q9PJP4_CHLMU/15-117),O51138_BORBU/10-119)),Q97CY1_CLOAB/7-109),((((DNAB_GUITH/4-106,DNAB_ODOSI/16-118),Q9TM03_CYACA/13-125),DNAB_SYNY3/7-109),(Q9A7Q5_CAUCR/23-125,((Q984U7_RHILO/9-111,DNAB_RICPR/17-119),Q9RMF2_ZYMMO/4-107)))),(Q9MC54_BPD3/2-102,((Q9T1M4_BPVT2/12-117,((Q9KUY7_VIBCH/23-125,((O80281_BPP1/8-110,DNAB_ECOLI/26-128),DNAB_BUCAI/16-118)),DNAB_PASMU/18-120)),((Q9APZ1_PSEPU/19-121,Q9JUW8_NEIMA/19-121),Q9PGE1_XYLFA/28-130)))));
(((Q9X258_THEMA/3-105:0.34469,Q9AQH7_STAAU/9-111:0.55577):0.12554,(Q9Z693_THEAQ/5-108:0.14939,Q9RWW6_DEIRA/7-109:0.44234):0.21441):0.02256,((((Q05074_STRCL/9-113:0.91087,(DNAB_MYCTU/23-125:0.22870,Q9X8U7_STRCO/55-157:0.18434):0.05273):0.39508,(Q9CHI5_LACLA/9-111:0.24222,(Q99XJ1_STRPY/11-113:0.08152,Q97N64_STRPN/9-111:0.18273):0.24962):0.28806):0.05987,((DNAC_BACSU/9-111:0.23857,Q9X4C9_BACST/9-111:0.11604):0.07831,Q9K5Q9_BACHD/9-111:0.21594):0.11777):0.14389,(DNAB_TREPA/15-117:0.50072,DNAB_RHOMR/45-147:0.51534):0.09417):0.07099,((((((DNAB_MYCPN/13-121:1.59597,DNAB_HELPJ/6-103:0.79494):0.44940,((((GP1D_CHLPS/7-108:0.23587,Q46273_CHLPN/6-107:0.25180):0.30394,GP1D_CHLTR/7-109:1.00010):0.78507,Q9PHV3_CAMJE/3-96:0.89677):0.10320,Q9MCP7_BPHK7/3-95:1.21547):0.38941):0.39131,((O67450_AQUAE/6-108:0.80832,Q9PJP4_CHLMU/15-117:0.81496):0.15078,O51138_BORBU/10-119:0.89716):0.10513):0.01852,Q97CY1_CLOAB/7-109:0.59096):0.16107,((((DNAB_GUITH/4-106:1.48419,DNAB_ODOSI/16-118:0.38398):0.14122,Q9TM03_CYACA/13-125:1.95242):0.28674,DNAB_SYNY3/7-109:0.63658):0.14766,(Q9A7Q5_CAUCR/23-125:0.44735,((Q984U7_RHILO/9-111:0.47488,DNAB_RICPR/17-119:0.52874):0.34822,Q9RMF2_ZYMMO/4-107:1.27174):0.01356):0.45888):0.20516):0.01567,(Q9MC54_BPD3/2-102:1.07299,((Q9T1M4_BPVT2/12-117:0.49080,((Q9KUY7_VIBCH/23-125:0.27014,((O80281_BPP1/8-110:0.28017,DNAB_ECOLI/26-128:0.08943):0.10110,DNAB_BUCAI/16-118:0.12314):0.00268):0.04093,DNAB_PASMU/18-120:0.39096):0.12694):0.07676,((Q9APZ1_PSEPU/19-121:0.26982,Q9JUW8_NEIMA/19-121:0.39308):0.05447,Q9PGE1_XYLFA/28-130:0.43969):0.13286):0.23349):0.02609):0.17521);