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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00772 phylogeny
for amino acid alignment


 
((((((((DNAB_MYCGE/10-119,DNAB_MYCPN/13-121),DNAB_HELPJ/6-103),Q9TM03_CYACA/13-125),(DNAB_GUITH/4-106,(((DNAB_ODOSI/16-118,DNAB_SYNY3/7-109),(Q9MC54_BPD3/2-102,((((Q9Z693_THEAQ/5-108,Q9RWW6_DEIRA/7-109),((((Q05074_STRCL/9-113,(DNAB_MYCTU/23-125,Q9X8U7_STRCO/55-157)),((Q9CHI5_LACLA/9-111,(Q99XJ1_STRPY/11-113,Q97N64_STRPN/9-111)),((DNAC_BACSU/9-111,Q9X4C9_BACST/9-111),(DNAB_TREPA/15-117,Q9K5Q9_BACHD/9-111)))),DNAB_RHOMR/45-147),(Q9X258_THEMA/3-105,Q9AQH7_STAAU/9-111))),(((O67450_AQUAE/6-108,Q9PJP4_CHLMU/15-117),O51138_BORBU/10-119),Q97CY1_CLOAB/7-109)),((Q9T1M4_BPVT2/12-117,(((DNAB_HAEIN/19-121,DNAB_ECOLI/26-128),O80281_BPP1/8-110),((Q9KUY7_VIBCH/23-125,DNAB_PASMU/18-120),DNAB_BUCAI/16-118))),((Q9PGE1_XYLFA/28-130,Q9JUW8_NEIMA/19-121),Q9APZ1_PSEPU/19-121))))),((Q9A7Q5_CAUCR/23-125,(Q984U7_RHILO/9-111,DNAB_RICPR/17-119)),Q9RMF2_ZYMMO/4-107)))),Q9MCP7_BPHK7/3-95),Q9PHV3_CAMJE/3-96),GP1D_CHLTR/7-109),GP1D_CHLPS/7-108,Q46273_CHLPN/6-107);
((((((((DNAB_MYCGE/10-119:0.15116,DNAB_MYCPN/13-121:0.39045):1.17041,DNAB_HELPJ/6-103:0.74225):0.29068,Q9TM03_CYACA/13-125:2.03680):0.12029,(DNAB_GUITH/4-106:1.62900,(((DNAB_ODOSI/16-118:0.80447,DNAB_SYNY3/7-109:0.66353):0.22904,(Q9MC54_BPD3/2-102:1.05289,((((Q9Z693_THEAQ/5-108:0.15031,Q9RWW6_DEIRA/7-109:0.44603):0.19279,((((Q05074_STRCL/9-113:0.89116,(DNAB_MYCTU/23-125:0.22077,Q9X8U7_STRCO/55-157:0.19426):0.09047):0.34296,((Q9CHI5_LACLA/9-111:0.22559,(Q99XJ1_STRPY/11-113:0.07993,Q97N64_STRPN/9-111:0.18545):0.26638):0.30905,((DNAC_BACSU/9-111:0.23960,Q9X4C9_BACST/9-111:0.11269):0.07048,(DNAB_TREPA/15-117:0.58543,Q9K5Q9_BACHD/9-111:0.14370):0.09591):0.11400):0.09165):0.04831,DNAB_RHOMR/45-147:0.57487):0.08693,(Q9X258_THEMA/3-105:0.33840,Q9AQH7_STAAU/9-111:0.56895):0.12949):0.05354):0.12182,(((O67450_AQUAE/6-108:0.85600,Q9PJP4_CHLMU/15-117:0.78214):0.15494,O51138_BORBU/10-119:0.87329):0.07512,Q97CY1_CLOAB/7-109:0.56864):0.16846):0.10359,((Q9T1M4_BPVT2/12-117:0.51581,(((DNAB_HAEIN/19-121:0.37823,DNAB_ECOLI/26-128:0.04961):0.05199,O80281_BPP1/8-110:0.27941):0.09656,((Q9KUY7_VIBCH/23-125:0.24428,DNAB_PASMU/18-120:0.40384):0.03447,DNAB_BUCAI/16-118:0.12380):0.00000):0.14100):0.09373,((Q9PGE1_XYLFA/28-130:0.45499,Q9JUW8_NEIMA/19-121:0.37972):0.03251,Q9APZ1_PSEPU/19-121:0.27375):0.13464):0.19881):0.08371):0.02279):0.08004,((Q9A7Q5_CAUCR/23-125:0.43843,(Q984U7_RHILO/9-111:0.47708,DNAB_RICPR/17-119:0.52398):0.35911):0.08372,Q9RMF2_ZYMMO/4-107:1.20452):0.38128):0.32465):0.13691):0.29612,Q9MCP7_BPHK7/3-95:1.12676):0.17018,Q9PHV3_CAMJE/3-96:0.89564):0.86360,GP1D_CHLTR/7-109:0.92330):0.37952,GP1D_CHLPS/7-108:0.26013,Q46273_CHLPN/6-107:0.22832);