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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00754 phylogeny
for restricted amino acid alignment


 
((((((((((((((((Q8EY56_LEPIN/147-276,Q8AAM3_BACTN/320-455),((Q9VM55_DROME/681-809,Q9VM55_DROME/1150-1276),((SSPO_BOVIN/357-499,Q8CG65_MOUSE/1949-2082),(((O35407_MOUSE/47-183,DDR2_HUMAN/45-182),((Q17305_CAEBR/10-147,Q95ZV6_CAEEL/10-148),Q9VMG2_DROME/5-136)),((((HMCT_BOMMO/959-1092,Q9U5D0_DROME/2092-2222),(((DISA_DICDI/16-149,DIS2_DICDI/17-151),Q86A91_DICDI/19-152),(CNTP1_MOUSE/38-166,((Q86YZ7_HUMAN/18-149,Q8WYK1_HUMAN/42-171),CNTP2_HUMAN/47-178)))),((HMCT_BOMMO/1132-1251,Q9U5D0_DROME/2270-2401),(((O76470_LYTVA/553-687,O76470_LYTVA/714-850),((O76470_LYTVA/394-527,O76470_LYTVA/234-368),O76470_LYTVA/74-207)),(O88442_MOUSE/390-528,(Q8N2E1_HUMAN/129-271,CPXM2_HUMAN/150-290))))),(((DCBD2_MOUSE/304-443,DCBD1_HUMAN/266-409),(((NRP2_RAT/449-589,(NRP1A_BRARE/444-578,(NRP1_HUMAN/446-580,NRP1_XENLA/446-581))),(NRP2_RAT/292-424,(NRP1A_BRARE/288-419,(NRP1_HUMAN/290-421,NRP1_XENLA/290-421)))),((Q804W6_FUGRU/1494-1630,(((O18806_CANFA/2200-2334,FA8_PIG/1990-2124),FA8_MOUSE/2176-2310),Q804X3_CHICK/1234-1368)),(((O88783_MOUSE/2040-2177,Q804X4_CHICK/601-737),(Q804W5_FUGRU/1659-1796,Q8AYE0_BRARE/264-401)),(((EDIL3_MOUSE/173-311,((MFGM_MOUSE/163-300,(O77718_HORSE/90-227,MFGM_PIG/106-244)),MFGM_HUMAN/85-222)),((((O88783_MOUSE/1881-2017,FA5_BOVIN/1909-2045),Q804X4_CHICK/446-578),(Q804W5_FUGRU/1506-1636,Q8AYE0_BRARE/110-241)),(Q804W6_FUGRU/1335-1471,(O18806_CANFA/2047-2177,Q804X3_CHICK/1081-1211)))),(EDIL3_MOUSE/334-473,(MFGM_HUMAN/245-384,(O77718_HORSE/228-363,(MFGM_MOUSE/323-460,MFGM_BOVIN/285-424))))))))),(Q8IQH0_DROME/154-264,(XLRS1_HUMAN/80-216,XLRS1_FUGRU/136-272)))))))),Q8LEV3_ARATH/665-802),Q8G7T8_BIFLO/1041-1166),Q8G7T8_BIFLO/1181-1327),(Q8PB72_XANCP/506-635,Q8A8W7_BACTN/192-294)),(((((Q8IK83_PLAF7/305-420,(Q8IKS0_PLAF7/297-426,Q8T5Z6_PLABE/298-418)),Q8XM24_CLOPE/39-159),(Q8XM24_CLOPE/1512-1625,Q8XM24_CLOPE/934-1060)),((((Q833V2_ENTFA/989-1120,((Q89ZU9_BACTN/236-363,Q89ZX7_BACTN/139-266),Q8A3D9_BACTN/234-362)),((Q8A089_BACTN/254-385,Q8A5P4_BACTN/178-309),(Q8A0I1_BACTN/312-440,(Q89YU9_BACTN/305-435,Q8A9F0_BACTN/303-432)))),((((((Q8XKX8_CLOPE/1228-1357,(Q8DR60_STRR6/1492-1622,(Q8G712_BIFLO/1548-1687,Q9F4D5_9BIFI/1344-1477))),(Q8VPE8_9ACTO/1329-1462,Q9AJR8_ERYRH/848-975)),Q9L448_ARTSP/1108-1239),(((O86617_STRCO/1208-1338,NANH_MICVI/510-641),((GAOA_DACDE/56-184,Q81DE5_BACCR/514-649),Q8A2L2_BACTN/1283-1415)),(Q8A2L2_BACTN/1144-1270,Q8A0H1_BACTN/1209-1337))),(Q89YL8_BACTN/467-577,(Q8A085_BACTN/484-599,Q8A7A0_BACTN/484-599))),((Q8XLJ5_CLOPE/1646-1780,(Q8XL08_CLOPE/630-763,(Q8XKN0_CLOPE/1105-1231,Q8XM24_CLOPE/1372-1498))),(NANH_CLOSE/57-181,Q8XMY5_CLOPE/54-176)))),Q8XLJ5_CLOPE/962-1091)),(Q8QKV2_9PHYC/417-531,((((((Q9RK44_STRCO/638-748,((((Q82M60_STRAW/195-344,(Q8A0E7_BACTN/763-877,Q8A515_BACTN/721-836)),Q82M60_STRAW/58-175),(Q8A3U9_BACTN/732-846,((Q93IE7_9BACL/536-655,Q93IE7_9BACL/671-792),((Q82PL5_STRAW/627-750,Q82PL5_STRAW/767-871),(O87851_STRCO/467-585,(Q82NF0_STRAW/70-184,(Q8XT36_RALSO/351-470,(Q9RK65_STRCO/37-151,Q9RK65_STRCO/176-290)))))))),(Q9L448_ARTSP/42-172,Q9L448_ARTSP/190-323))),(Q8XKN0_CLOPE/40-168,Q8XKN0_CLOPE/195-319)),((Q8XM72_CLOPE/697-828,Q9KER4_BACHD/757-860),(Q9CFI5_LACLA/212-334,(((Q88ZW2_LACPL/814-938,Q8G4P3_BIFLO/800-927),Q8XNP3_CLOPE/805-929),Q8A192_BACTN/1068-1195)))),(((Q87BJ0_XYLFT/190-304,Q8P8N7_XANCP/189-303),Q9X5U5_STRLA/830-933),Q870R5_NEUCR/66-192)),(((Q8XSJ7_RALSO/1111-1228,Q8XSJ7_RALSO/1247-1364),Q82ZM8_ENTFA/46-157),(Q8A1J9_BACTN/343-458,(Q8CKA9_YERPE/32-154,(Q82N96_STRAW/776-894,Q82N96_STRAW/1004-1123))))),(((P75020_STRLI/512-638,Q9FC46_STRCO/200-323),Q82MD7_STRAW/593-719),((P75020_STRLI/46-169,Q9FC46_STRCO/49-177),P75020_STRLI/186-309)))))),((Q89ZT1_BACTN/454-596,Q89ZV1_BACTN/445-586),((Q8XKW3_CLOPE/647-777,(Q8XM09_CLOPE/660-774,Q8XM09_CLOPE/904-1022)),NAGH_CLOPE/809-941))),((((((Q8XJ85_CLOPE/367-474,Q89YL8_BACTN/313-434),Q8A5P6_BACTN/354-473),Q9PH40_XYLFA/342-448),Q8A0R5_BACTN/336-456),(Q8XKW1_CLOPE/75-206,Q8XKW1_CLOPE/300-428)),Q8XNF8_CLOPE/258-365)),(Q8A0N3_BACTN/318-438,(Q89YM0_BACTN/197-314,Q8F329_LEPIN/56-173))),Q8XK80_CLOPE/781-905),O52800_AMYOR/809-933),((Q8CY62_STRR6/617-739,Q8CY62_STRR6/906-1032),Q8CY62_STRR6/765-890)),((Q9I925_ANGJA/49-179,Q9I927_ANGJA/48-180),Q9I926_ANGJA/48-177)),Q8AVL6_XENLA/176-299),Q8AVL6_XENLA/33-157,Q8AVL6_XENLA/315-439);
((((((((((((((((Q8EY56_LEPIN/147-276:1.13618,Q8AAM3_BACTN/320-455:1.53689):0.31197,((Q9VM55_DROME/681-809:0.80200,Q9VM55_DROME/1150-1276:0.94949):0.39207,((SSPO_BOVIN/357-499:0.52346,Q8CG65_MOUSE/1949-2082:0.61056):0.51049,(((O35407_MOUSE/47-183:0.38738,DDR2_HUMAN/45-182:0.21214):0.36666,((Q17305_CAEBR/10-147:0.27207,Q95ZV6_CAEEL/10-148:0.39741):0.17939,Q9VMG2_DROME/5-136:0.66366):0.28762):0.36373,((((HMCT_BOMMO/959-1092:0.40627,Q9U5D0_DROME/2092-2222:0.66091):0.36618,(((DISA_DICDI/16-149:0.48324,DIS2_DICDI/17-151:0.24098):0.08432,Q86A91_DICDI/19-152:0.41747):0.59030,(CNTP1_MOUSE/38-166:0.65381,((Q86YZ7_HUMAN/18-149:0.21104,Q8WYK1_HUMAN/42-171:0.15972):0.19204,CNTP2_HUMAN/47-178:0.17225):0.20854):0.42262):0.06727):0.07829,((HMCT_BOMMO/1132-1251:0.47706,Q9U5D0_DROME/2270-2401:0.65059):0.48482,(((O76470_LYTVA/553-687:0.30564,O76470_LYTVA/714-850:0.39847):0.17428,((O76470_LYTVA/394-527:0.42159,O76470_LYTVA/234-368:0.43990):0.08048,O76470_LYTVA/74-207:0.33802):0.05962):0.11318,(O88442_MOUSE/390-528:0.27363,(Q8N2E1_HUMAN/129-271:0.46533,CPXM2_HUMAN/150-290:0.15892):0.07421):0.53239):0.08573):0.05007):0.18611,(((DCBD2_MOUSE/304-443:0.39803,DCBD1_HUMAN/266-409:0.58739):0.27657,(((NRP2_RAT/449-589:0.47572,(NRP1A_BRARE/444-578:0.25976,(NRP1_HUMAN/446-580:0.18335,NRP1_XENLA/446-581:0.12749):0.10964):0.22497):0.46927,(NRP2_RAT/292-424:0.31472,(NRP1A_BRARE/288-419:0.22614,(NRP1_HUMAN/290-421:0.12416,NRP1_XENLA/290-421:0.21547):0.09656):0.19267):0.30894):0.14744,((Q804W6_FUGRU/1494-1630:0.40114,(((O18806_CANFA/2200-2334:0.10906,FA8_PIG/1990-2124:0.15267):0.06791,FA8_MOUSE/2176-2310:0.08722):0.14147,Q804X3_CHICK/1234-1368:0.25189):0.15554):0.23965,(((O88783_MOUSE/2040-2177:0.21719,Q804X4_CHICK/601-737:0.27203):0.13096,(Q804W5_FUGRU/1659-1796:0.23644,Q8AYE0_BRARE/264-401:0.25113):0.20297):0.15399,(((EDIL3_MOUSE/173-311:0.30639,((MFGM_MOUSE/163-300:0.10368,(O77718_HORSE/90-227:0.12040,MFGM_PIG/106-244:0.10806):0.07820):0.06180,MFGM_HUMAN/85-222:0.30599):0.27730):0.24524,((((O88783_MOUSE/1881-2017:0.20493,FA5_BOVIN/1909-2045:0.14675):0.27978,Q804X4_CHICK/446-578:0.20302):0.16366,(Q804W5_FUGRU/1506-1636:0.27935,Q8AYE0_BRARE/110-241:0.25850):0.22127):0.11357,(Q804W6_FUGRU/1335-1471:0.48549,(O18806_CANFA/2047-2177:0.15384,Q804X3_CHICK/1081-1211:0.21901):0.19112):0.09439):0.29844):0.16390,(EDIL3_MOUSE/334-473:0.30278,(MFGM_HUMAN/245-384:0.12980,(O77718_HORSE/228-363:0.10674,(MFGM_MOUSE/323-460:0.21032,MFGM_BOVIN/285-424:0.11381):0.04184):0.09370):0.20897):0.17909):0.06946):0.09814):0.11232):0.04502):0.04307,(Q8IQH0_DROME/154-264:0.76874,(XLRS1_HUMAN/80-216:0.18992,XLRS1_FUGRU/136-272:0.06825):0.66708):0.03870):0.06896):0.15396):0.22808):0.30889):0.31509):0.19949,Q8LEV3_ARATH/665-802:1.44545):0.06573,Q8G7T8_BIFLO/1041-1166:1.35169):0.12316,Q8G7T8_BIFLO/1181-1327:1.27917):0.04811,(Q8PB72_XANCP/506-635:1.34321,Q8A8W7_BACTN/192-294:1.25437):0.14221):0.05108,(((((Q8IK83_PLAF7/305-420:0.65764,(Q8IKS0_PLAF7/297-426:0.26621,Q8T5Z6_PLABE/298-418:0.32049):0.43683):0.35931,Q8XM24_CLOPE/39-159:0.54048):0.25309,(Q8XM24_CLOPE/1512-1625:0.68812,Q8XM24_CLOPE/934-1060:1.07250):0.35230):0.28747,((((Q833V2_ENTFA/989-1120:0.86030,((Q89ZU9_BACTN/236-363:0.63482,Q89ZX7_BACTN/139-266:0.61679):0.49924,Q8A3D9_BACTN/234-362:0.42860):0.47286):0.14361,((Q8A089_BACTN/254-385:0.60569,Q8A5P4_BACTN/178-309:0.97774):0.12018,(Q8A0I1_BACTN/312-440:0.74653,(Q89YU9_BACTN/305-435:0.72515,Q8A9F0_BACTN/303-432:0.26109):0.26184):0.10332):0.45477):0.06890,((((((Q8XKX8_CLOPE/1228-1357:0.84466,(Q8DR60_STRR6/1492-1622:0.88618,(Q8G712_BIFLO/1548-1687:0.62610,Q9F4D5_9BIFI/1344-1477:0.63335):0.06971):0.21167):0.10317,(Q8VPE8_9ACTO/1329-1462:0.76560,Q9AJR8_ERYRH/848-975:0.89075):0.37404):0.11745,Q9L448_ARTSP/1108-1239:0.86027):0.09053,(((O86617_STRCO/1208-1338:0.59668,NANH_MICVI/510-641:0.62522):0.14909,((GAOA_DACDE/56-184:0.57647,Q81DE5_BACCR/514-649:0.61146):0.12451,Q8A2L2_BACTN/1283-1415:0.82827):0.10615):0.19067,(Q8A2L2_BACTN/1144-1270:0.63995,Q8A0H1_BACTN/1209-1337:0.43610):0.05865):0.12006):0.11632,(Q89YL8_BACTN/467-577:1.04184,(Q8A085_BACTN/484-599:0.25786,Q8A7A0_BACTN/484-599:0.06963):1.04000):0.28003):0.08180,((Q8XLJ5_CLOPE/1646-1780:0.51839,(Q8XL08_CLOPE/630-763:0.43681,(Q8XKN0_CLOPE/1105-1231:0.20411,Q8XM24_CLOPE/1372-1498:0.23618):0.29381):0.10689):0.18773,(NANH_CLOSE/57-181:0.63259,Q8XMY5_CLOPE/54-176:0.36280):0.27295):0.14734):0.07758):0.11827,Q8XLJ5_CLOPE/962-1091:1.00602):0.13427):0.02822,(Q8QKV2_9PHYC/417-531:1.25930,((((((Q9RK44_STRCO/638-748:1.21264,((((Q82M60_STRAW/195-344:0.78544,(Q8A0E7_BACTN/763-877:0.24118,Q8A515_BACTN/721-836:0.52766):0.11521):0.17115,Q82M60_STRAW/58-175:0.56623):0.03943,(Q8A3U9_BACTN/732-846:0.58382,((Q93IE7_9BACL/536-655:0.17227,Q93IE7_9BACL/671-792:0.28261):0.15774,((Q82PL5_STRAW/627-750:0.20513,Q82PL5_STRAW/767-871:0.43359):0.41027,(O87851_STRCO/467-585:0.48284,(Q82NF0_STRAW/70-184:0.28110,(Q8XT36_RALSO/351-470:0.51778,(Q9RK65_STRCO/37-151:0.28777,Q9RK65_STRCO/176-290:0.31500):0.07081):0.06354):0.03551):0.15354):0.08314):0.10944):0.09203):0.23621,(Q9L448_ARTSP/42-172:0.14694,Q9L448_ARTSP/190-323:0.67668):0.71930):0.06483):0.18461,(Q8XKN0_CLOPE/40-168:0.72188,Q8XKN0_CLOPE/195-319:0.30090):0.35749):0.09740,((Q8XM72_CLOPE/697-828:0.64732,Q9KER4_BACHD/757-860:0.54626):0.19610,(Q9CFI5_LACLA/212-334:0.44663,(((Q88ZW2_LACPL/814-938:0.36958,Q8G4P3_BIFLO/800-927:0.38988):0.06660,Q8XNP3_CLOPE/805-929:0.32740):0.01942,Q8A192_BACTN/1068-1195:1.13320):0.07975):0.13578):0.28681):0.04481,(((Q87BJ0_XYLFT/190-304:0.13684,Q8P8N7_XANCP/189-303:0.22343):0.95003,Q9X5U5_STRLA/830-933:0.76486):0.14253,Q870R5_NEUCR/66-192:0.98318):0.36233):0.11548,(((Q8XSJ7_RALSO/1111-1228:0.23810,Q8XSJ7_RALSO/1247-1364:0.14666):0.69459,Q82ZM8_ENTFA/46-157:1.20381):0.06585,(Q8A1J9_BACTN/343-458:1.24644,(Q8CKA9_YERPE/32-154:1.06942,(Q82N96_STRAW/776-894:0.37034,Q82N96_STRAW/1004-1123:0.22305):0.31870):0.11503):0.15021):0.08565):0.07655,(((P75020_STRLI/512-638:0.27282,Q9FC46_STRCO/200-323:0.32176):0.74353,Q82MD7_STRAW/593-719:0.35566):0.07791,((P75020_STRLI/46-169:0.36595,Q9FC46_STRCO/49-177:0.50943):0.18288,P75020_STRLI/186-309:0.24284):0.10927):0.76008):0.11334):0.11974):0.07832):0.04281,((Q89ZT1_BACTN/454-596:0.46408,Q89ZV1_BACTN/445-586:0.52484):1.18108,((Q8XKW3_CLOPE/647-777:0.84115,(Q8XM09_CLOPE/660-774:1.03820,Q8XM09_CLOPE/904-1022:0.50244):0.33447):0.32873,NAGH_CLOPE/809-941:0.76234):0.40419):0.13776):0.10975,((((((Q8XJ85_CLOPE/367-474:0.98166,Q89YL8_BACTN/313-434:0.77045):0.18875,Q8A5P6_BACTN/354-473:0.79144):0.30542,Q9PH40_XYLFA/342-448:0.76023):0.16500,Q8A0R5_BACTN/336-456:1.25714):0.25590,(Q8XKW1_CLOPE/75-206:0.18688,Q8XKW1_CLOPE/300-428:0.45137):0.83644):0.35921,Q8XNF8_CLOPE/258-365:1.26549):0.24992):0.13026,(Q8A0N3_BACTN/318-438:0.92919,(Q89YM0_BACTN/197-314:0.83820,Q8F329_LEPIN/56-173:1.07707):0.25339):0.42252):0.08256,Q8XK80_CLOPE/781-905:1.05683):0.18361,O52800_AMYOR/809-933:1.20707):0.50457,((Q8CY62_STRR6/617-739:0.47426,Q8CY62_STRR6/906-1032:0.37974):0.14621,Q8CY62_STRR6/765-890:0.46755):0.31815):0.95145,((Q9I925_ANGJA/49-179:0.15985,Q9I927_ANGJA/48-180:0.22934):0.04427,Q9I926_ANGJA/48-177:0.08846):0.27488):0.40670,Q8AVL6_XENLA/176-299:0.13183):0.07369,Q8AVL6_XENLA/33-157:0.38766,Q8AVL6_XENLA/315-439:0.08272);