EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00748 alignment
(11 sequences with 414 bp)


ICAL_PIG/513-638 CTTGATGCTTTGTCCCAGGACTTTGCCGGTCCC---...---------------CCAGCCGCTTCATCTCTT---TTTGAAGATGCTAAACTTTCAGCTGCCGTCTCTGAAGTGGTTTCCCAAACCTCAGCTCCAACCACCCACTCTGCAGGTCCACCCCCTGACACTGTGAGTGAT---------GACAAAAAACTTGACGATGCCCTGGATCAGCTTTCTGACAGTCTGGGGCAAAGACAGCCTGACCCAGATGAGAACAAGCCCATAGAGGATAAAGTCAAGGAA---AAAGCTGAAGCTGAACATAGAGACAAGCTGGGAGAAAGAGATGACACTATCCCGCCTGAATATAGACATCTCTTGGATAAGGATGAGGAGGGCAAATCAACGAAGCCACCCACAAAGAAACCT
ICAL_HUMAN/512-638 CTGGATGCTTTGTCTGAGGACTTCTCTGGTCCA---...---------------CAAAATGCTTCATCTCTTAAATTTGAAGATGCTAAACTTGCTGCTGCCATCTCTGAAGTGGTTTCCCAAACCCCAGCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGCAGAGT---------GACAAAGACCTCGATGATGCCTTGGATAAACTCTCTGACAGTCTAGGACAAAGGCAGCCTGACCCAGATGAGAACAAACCAATGGGAGATAAAGTAAAGGAA---AAAGCTAAAGCTGAACATAGAGACAAGCTTGGAGAAAGAGATGACACTATCCCACCTGAATACAGACATCTCCTGGATGATAATGGACAGGACAAACCAGTGAAGCCACCTACAAAGAAATCA
ICAL_BOVIN/500-626 CTCGATGCTCTGTCCAAGGACTTCACTGTCCCC---...---------------TCAGACACATCATCGCCTCAATTTGAAGATGCTAAACTTTCAGCTGTCGTCTCTGAAGTGGTTTCCCAAACCCCAGCTCCAACCACCCAGGCAGCCGGTCCACCCCCAGACTGCGCACGTGAC---------AACAAAGAACTTGACGATGCCCTGGATCAACTTTCTGACACTCTCGGGCAAAGACAGCCTGATCCAGATGAGAATAAACCCGTAGAGGATAAAGTCAAGGAA---AAAGCCAAAGCTGAACACAGAGACAAGCTGGGAGAAAGAGATGACACCATCCCACCTAAATACCAACATCTTTTGGATGACAACAAGGAGGGCACACCCGGGAAGCCAAAGGATCAGAGAGCC
ICAL_RABIT/372-505 ATTGACGAACTTTCCAAGGATTTTAGCCAGGCTAAGagtAACGAAAAGCAGCCTAAGCCAACTGGAAAAACAGAAGAGTCCAAGGCTGCCGTCCCCGCTCCAGTGGCCGAAGCTGTGCCTCGGACGTCCATGTGCAGTATACAGCCGGTGCCACCCAAGCCTGCCTCGCTGCAGAAG---------AGCACGGTGCCGGATGATGCCGTGGAAGCCTTGGCTGGCAGCCTTGGGAGGAAGGAGGCTGATCCAGAAGAAGGGAAACCTGTGGCAGATAAAATCAAGGAG---AAATCCAAGGAAGAAGAGCGGGAAAAACTTGGTGAAAAGGAAGAAACCATTCCCCCTGATTATAGACTGGAAGAGGCTAAGGATAAAGATGGAAAACCACTCCTGCCATCAGAGCCCACTGCA
ICAL_PIG/372-502 ATTGATGAACTTTCGGAAGATTTTGACCAGTCTAAGcgtAAAGAAAAACAATCTAAGCCAACTGAAAAAACAAAAGAGTCTCAGGCCACTGCCCCTACTCCTGTGGGAGAGGCCGTGTCTCGGACCTCCTTGTGCTGTGTGCAGTCGGCACCCCCAAAGCCAGCTACG------------------GGCATGGTGCCAGATGATGCTGTAGAAGCGCTTGCTGGAAGCCTGGGGAAAAAGGAAGCTGATCCAGAAGATGGAAAGCCTGTGGAGGATAAAGTCAAGGAG---AAAGCCAAAGAAGAGGATCGTGAAAAACTTGGTGAAAAGGAAGAAACGATTCCTCCTGATTATAGATTAGAAGAGGTCAAGGACAAAGATGGAAAAACTCTCCCGCACAAAGACCCCAAGGAA
ICAL_BOVIN/357-489 ATTGATGAACTCTCAGAAGATTTTGACCAGTCTAAGccaACTGAAAAACAATCTAAGCCAACAGAAAAAACAGAGGCATCCCCTGCCGCTGCCCCGTACCCCGTGGCAGAGGACGTGCCTCGGACCTCTATGTGTTCCCTGCAGTCGGCTCCGCCCACAGCAGCTCCAGCGAAG------------GGCATGGTGCCAGACGATGCTGTCGAAGCGCTTGCTGGAAGCCTCCCGAAAAAGGAAGCAGATCCAGAAGACGGAAAGCCTGTGGAGGATAAAGTCAAGGAG---AAAGCCAAAGAAGAGGATCGTGAGAACTTCGGTGAAAAGGAAGAAACGATTCCTCCTGATTACAGATTAGAAGAAGCCAAGGATAAAGACGGAAAACCACTGCTGCCAAAAGAGGTCAAGGAA
ICAL_RABIT/232-361 ATCGACGCCCTGTCGTCTGACTTCACCTGCAGC---...---------------TCTCCCGTGGCCAGTGGGAAGGAAGCCGGGAAGGAGGCAGCGAAATCTGCAGGAGAAGTTTTGGAAGCTGAGTCGGCCAAAGTCATGAGAGCTGCAGCCCCACCCCAGGAGAAGAAGAGAAAGGTGGAGGAGGATGCAATGAGCGACCAAGCACTTGAGGCTCTGTCGGCTTCGCTGGGCACCCGGATGGCAGAACCTGAGCTGGATCTGAGCTCCATCAAGGAAGTGGCCGAGGCGAAACGTAAAGAAGAAAAAGTAGAGAAGTGCGGTGAAGATGATGAAACCGTCCCAGCCGAGTACAGACTGAAACCAGCCACGGATAAAGATGGAAAACCACTGTTGCCA---GAGCCTGCAGAG
ICAL_BOVIN/212-346 ATCGATGCCTTGTCATCCGACTTCACCTGCAGTTCCctaCAGCTGACTACCTGCAGTCCTACAGCTGATGGCAAGGAAACTGAGAAAGAG------AAATCTACAGAAGAGGCTTTAAAAGCTCAGTCAGCTGGGGTGATCAGAAGTGCTGCTCCACCCAAAGAGAAAAGAAGAAAAGTGGAAGAGGATACCATGACTGAGCAAGCCCTCCAGGCCCTGTCTGCCTCCCTTGGCACCCGGAAGCCAGAGCCGGAGCTCGACCCCAGCTCCATTAGGGAGGTCGATGAGGCAAAAGCCAAAGAAGAGAAAGTAAAGAAATGTGGTGAAGATGAGGAAACAGTCCCATCGGAGTACAGATTAAAACCGGCCACAGATAAAGATGGAAAACCACTCTTGCCA---GAGGCTGAAGAA
ICAL_PIG/99-225 CCAAAGGCTAAACCACAGGACCCGACCCCCAGT---...---------------------GATGGAAAGCTTTCTGTT---ACTGGTGTATCTGCAGCATCTGGCAAACCAGCTGAGACGAAAAAAGATGATAAATCATTAACATCGTCTGTACCAGCTGAATCCAAATCAAGTAAACCATCAGGAAAGTCAGATATGGATGCTGCTTTGGATGACTTAATAGACACTTTAGGAGGACCTGAAGAAACTGAGGAAGATAATACAACATATACTGGACCTGAAGTTTTGGATCCAATGAGTTCTACCTATATAGAGGAATTGGGTAAAAGAGAAGTCACACTTCCTCCAAAATATAGGGAATTGTTGGATAAAAAA---GAAGGGATCCCAGTGCCTCCTCCAGACACTTCGAAA
ICAL_CERAE/99-224 CCAAAGACTGAACCACAAGACATGGTCTCTGCT---...---------------------GGTGGAGAGAGCGTT------GCTGGTGTCGCTGCAACATCTGGCAAGCCAGGTGACAAGAAAAAAGAAAAGAAATCGTTAACCCCAGCTGTGCCAGTTGAATCTAAACCGGATAAACCATCGGGAAAGTCAGGCATGGATGCTGCTTTGGATGACTTAATAGATACTTTAGGAGGACCTGAAGAAATTGAAGAAGAAAATACAACGTATACTGGACCAGAAGTTTCAGATCCAATGAGTTCCACCTACATAGAGGAATTGGGTAAAAGAGAAGTCACAATTCCTCCAAAATATAGGGAACTATTGGCTAAAAAC---GAAGGGATCACAGGGCCTCCTGCAGACTCTTCGAAA
ICAL_BOVIN/77-204 CCAAAGACCAAGTCACAGGACAAGATCTCCGGT---...---------------------GGTGGAAAGAGCACTGTTCCTGCTGCTGCTGCTGCAGCATCTGCCGAACCAGCTGACAAGAATAAAGAAAATAAATTGTTAACATCGGCCGTACCAGCTGAATCTAAACCAAGTAAACCATCTGGAAAGTCAGACATGGACACTGCTCTGGATGACTTAATAGACACTTTAGGAGAACCTGAAGAGATGAAAGAAGATAACACAACATATACCGGACCGGAAGTGTCGGATCCGATGAGTTCTACCTACATAGAGGAACTGGGTAAAAGAGAATCCACACCTCCTCCAAAATATAAGGAACTTCTGAATAAAGAA---GAAGGGATCGCAGGGCCTCCTCCAGACTCCTTGAAA