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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00729 - Viral_coat)
Viral coat protein (S domain)
(Pfam reference: accession no. PF00729)
(Interpro reference: accession no. IPR000937)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 245 aa
(ave. pairwise identity: 0.33)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 8.84)
nucleotides
(available for above)
11 sequences @ 735 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 6.17)
amino acids, restricted set
(corresp. to available nt seqs)
11 sequences @ 245 aa
(ave. pairwise identity: 0.30)
New Hampshire format
(total tree length: 8.45)