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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00716 alignment
(10 sequences with 421 aa)


VP40_VZVD/28-373 ELNITPEIVRSALPPTS-......-KIPINIDHRKDCVVGEVIAIIEDIRGPFFLGIVRCPQLHAVLFEAAHSNFFGNRDS-.-VLSPLERALYLVTNYLPSVSLSSKR----LSPNEIP-.-DGNFFTHVALCVVGRRVGTVVNYDCTPESSIEPFRVLSMESKARLLS---LVKDYAGLNK.....-----VWKVSEDKLAKVLLSTAVNNMLLRDRWDVVAKRRREAGIM.GHVYLQASTGYGLARITNVNGVESKLPNAG................VINATFHPGG-------P-IYDLALGVGE.............SNEDCEKTVPHLKVTQLCRND......SDMASVAGNASNISPQPPSgvptGGEFVLIPTAYYSQLLTGQTKNPQVSIGAPNNGQYIVGPYGSPHPPAFP
VP40_BHV1C/44-376 ELVLTREQVARALPPAA-......-PLPINIDHASACEVGAVLALADDDAGLFFVGVINCPQLADTLAGVAHPAFFGADAP-.-SLTPRERFLYLVSNYLPSVSLSSRR----LAPDEEA-.-DGTLFAHVALCVLGRRVGTIVTYDATPDACVAPFRRLSPRARAALLANAEAARAALGDR-.....-----AWPVPREALAQTLLSTAVNNMLVRDKWDTVSRRRREAGIA.GHTYLQASAVFPLPTGG--EGPERTGGRER................AQKSAVAGGV----CIALPVAGGRARQPE.............LPPAPPPPPPPP---------......--AMSAAHQAGAASAHPLP....AGDYVYVPTAQYNQLVVSQARGAAMT-AAP-PPAPYFLPAAAAAAAAPP
VP40_HHV11/37-365 ELALDPDTVRAALPPDN-......-PLPINVDHRAGCEVGRVLAVVDDPRGPFFVGLIACVQLERVLETAASAAIFERRGP-.-PLSREERLLYLITNYLPSVSLATKR----LGGEAHP-.-DRTLFAHVALCAIGRRLGTIVTYDTGLDAAIAPFRHLSPASREGARRLAAEAELALSGR-.....-----TWAPGVEALTHTLLSTAVNNMMLRDRWSLVAERRRQAGIA.GHTYLQASEKFKMWGAEPVSAPARGYKNGA................PESTDIPPGS----IAAAPQGDRCPIVRQ.............RGVALSPVLPP----------......---MNPVPTSGTPAPAPPG....DGSYLWIPASHYNQLVAGHAAPQPQ------PHSAFGFPAAAGSVAYGP
VP40_ILTVT/28-358 EYELTREQSKSALPVLPG......-TIPINIDHESSCVVGTVLTILDLPRGLFCLGVVSTALAPIFLSYVQDDALFANAEEG.MVLTETEKFLYLLSNILPSLSLSSRR----LEKNEVP-.-GKDFFAHVALCELGRREGTVAIYGATASEAIGAFDDLSAPIKEQLYEIATREKCAEVP--.....------RELSRPEITRVLMKKFIHGAFLMDRGTCLKTRREMAAVY.NPKYLQANEVITIGIKEHSEETPENAIKDR................----SVSTQT-------APSFDISESQQP.............SGQTHVPAMESATCSG-----......----QFLQTKNGASPSASR....-EDMVYVPFEKYASLLAASAR-RDNDRRPVSPSREFSRRSRDSTHECSP
VP40_SCMVC/22-347 ELFLPSGVVDRWLRDCRG......-PLPLNVNHDESATVGYVAGLQNVRAGLFCLGRVTSPKFLDIVQKASEKSELVSRGPPsESSLRPDGVLEFLSGSYSGLSLSSR--RDINAADGAAGdAETACFKHVALCSVGRRRGTLAVYGRQPDWVMERFPDLTEADREALRN----QLSGSGEVAakesaESSAAAAVDPFQSDSYGLLGNSVDALYIQERLPKLRYDKRLVGVTaRESYVKASVSPAEQETCDIKVEKER-----................----PKEPEQ-----------SHVPTES-.............MSHPMSAVATPAAS-------......-------TVAPSQAPLALA....-HDGVYLPKDAFFSLIGASR------PLAEAAGARAAYPAVPPP-PAYP
VP40_HCMVA/31-415 ELLLPRDVVEHWLHAQGQgqpslsVALPLNINHDDTAVVGHVAAMQSVRDGLFCLGCVTSPRFLEIVRRASEKSELVSRGP-.VSPLQPDKVVEFLSGSYAGLSLSSRRCDDVEAATSLSG.SETTPFKHVALCSVGRRRGTLAVYGRDPEWVTQRFPDLTAADRDGLRA----QWQRCG---.....STAVDASGDPFRSDSYGLLGNSVDALYIRERLPKLRYDKQLVGVTeRESYVKASVSP--EAACDIKAASAERSGDSrsqaatpaagarvpssSPSPPVEPPSPVQPPALPASPSVLPAESPpslspsepaeaasMSHPLSAAVPAATAPPG----......---ATVAGASPAVSSLAWP....-HDGVYLPKDAFFSLLGASRSAVPVMYPGAVAAPPSASPAPLPL-PSYP
VP40_HHV7J/21-315 NFYLPRRTIQEEINSGNG......LNIPLNINHNENAVIGTVSSLSVYST-VCFVARVQSKEFLTIIKKIAAKSKLITN--TeEKTLPPDPEIECLNSIFPGLSLSNR-----VGGNE---.-RDPFFKHVSICGVGRRPGTIAIFGRNLNWILDRFSSITEAEKEKILS----TDQSCV---.....---QFFAEEQFKVDLYDLLADSLDTSYIKVRFPKLQSDKQLSGIS.KSTYIKASENL--TANNHTINVNSK-----................-----VTKET-----------EATDSVS-.............-QDDCAVHAPDLIS-------......--------TICSTTHTTH-....-HDLVRMNGSATGNSASLPA--------PQFSEC-VFLPKDTFC-SLLN
VP40_SHV21/21-310 VLYLNLDDVSKCLPLTK-......-PIPLNIEHLPESTIGHTIGLYAVTHGVFCVGVIHSEKFLHLTENLFSNSCVAQATS-.-KFLPYQPLLEMLHTWLPALSLSSLCP---TAQNAAN-.--TNMFQHVSLCALGRRRGTVAVYSMNLEDAISQFCSISQAEVENIYQ----DSKNVD---.....--INSLPKPVFNIDPHILMAKAIDAGFIKDRLQLLKTDKGVAKIK.KLTYLKASEIG--KPVTEDISEDMN-----................-------------------------QHG-.............-------IVPQG---------......-------SDDLISVPKSTF....-LSMLQNNLDNFKQHPRPACFPQYFSPQGAYMPYELYPPQPYS--GDNI
VP40_EHV2/58-381 ALYLNPADVGAHLPLPG-......-PIPLNVEHLQEAHVGWTLGLHLTRYGLFCVAVITAEEFFTLLDRLCAASSVARTRAD.-HHLPPNPTLEMLHTWLPELSLSSIHP---DALPGAKG.GDTPIFQHVALCAMGQRRGTVAVYGESLDWILSKFTSLSPEERGAIAE----GYASPA---.....--PESLPEPHFTCSNEILMAKAIDAGFIKNRLEILKTDKGVAEVK.APTYLKASVQG--LPANLDEVDSARG----................----GEDPPTAAIATTPHPATDATTMNQQ.............--QPFAAQAPAGG--------......-------CEDLISVPRSTF....-MTMLQTNLDTMRQTSLGQRFGQPIDAP-AAPPAQLRVPPPAAPFPVHP
VP40_EBV/24-327 CLHLDPLTVKSQLPLKK-......-PLPLTVEHLPDAPVGSVFGLYQSRAGLFSAASITSGDFLSLLDSIYHDCDIAQSQR-.-LPLPREPKVEALHAWLPSLSLASLHP---DIPQTTADgGKLSFFDHVSICALGRRRGTTAVYGTDLAWVLKHFSDLEPSIAAQIENDANAAKRESG---.....------CPEDHPLPLTKLIAKAIDAGFLRNRVETLRQDRGVANIP.AESYLKASDAPDLQKPD----KALQ-----................------SPPP-------------ASTDP-.............-ATMLSGNAGEG---------......-------ATACGGSAAAG-....-QDLISVPRNTFMTLLQTNLDNKPPR-QTPLPYAAPLPPFSHQAIATAP