EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00693 alignment
(13 sequences with 915 bp)


KITH_PRVN3/10-279 GGCGCCTACGACACCGGCAAGAGCACCACGGCCCGGGTGATGGCGCTCGGCGGG------------------GCGCTGTACGTGCCCGAGCCGATGGCGTACTGGCGCACTCTGTTCGAC...ACGGACACGGTGGCCGGTATTTACGATGCGCAGACCCGGAAGCAGAACGGCAGCCTGAGCGAGGAG---..................---GACGCGGCCCTCGTCACGGCGCACGACCAGGCCGCCTTCGCGACGCCGTACCTGCTGCTGCACACGCGCCTGGTCCCGCTCTTCGGGCCCGCGGTCGAGGGCCCG------------------CCC------......GAGATGACGGTCGTCTTTGACCGCCACCCGGTGGCCGCGACGGTGTGCTTCCCGCTGGCGCGCTTCATCGTCGGGGACATCAGCGCGGCGGCCTTCGTGGGCCTGGCGGCCACGCTGCCCGGGGAGCCCCCCGGCGGCAACCTGGTGGTGGCCTCGCTGGAC---CCGGACGAGCACCTGCGGCGCCTGCGCGCCCGCGCGCGCGCCGGGGAGCACGTGGACGCGCGCCTGCTCACGGCCCTGCGCAACGTCTACGCCATGCTGGTCAACACGTCGCGCTACCTGAGCTCGGGGCGCCGC---------------TGGCGCGACGACTGGGGGCGCGCGCCGCGCTTCGACCAGACCACGCGGGACTGCCTCGCGCTCAACGAGCTCTGCCGCCCGCGCGAC------GAC...CCCGAGCTCCAGGACACCCTCTTTGGCGCGTACAAGGCGCCCGAGCTCTGCGACCGGCGCGGGCGC---CCGCTCGAGGTGCACGCGTGGGCGATGGACGCGCTCGTGGCCAAGCTGCTGCCGCTGCGCGTCTCCACCGTCGACCTGGGG
KITH_EHV1B/32-309 GGGGTCTACGGCATCGGCAAGAGCACGACTGGACGAGTTATGGCATCGGCTGCGAGTGGAGGA---AGTCCAACTCTATACTTTCCTGAGCCTATGGCGTACTGGCGGACTCTCTTTGAA...GCGGACGTAATTAGTGGTATTTACGACACCCAGAACCGGAAACAGCAGGGAGATTTGGCGGCTGAT---..................---GACGCGGCGTCAATAACGGCGCACTACCAGAGCCGCTTTACCACGCCCTACCTTATCCTACACGATCACACATTTGGGTTGTTTGGGGGCGACAGCCTACAGCGTGGGACAAGA---------CCA------......GACCTAACCGTCGTTTTTGACCGCCACCCAGTCGCCTCTGCCGTGTGCTTTCCCGCCGCTCGCTACCTCATCGGAGACATGTCCATGTGCGCGCTGATTGCCATGGTTGCCACCCTACCCAGGGAACCGCAAGGCGGAAACATCGTGGTTACCACCCTCAAT---GTGGACGAGCACGTGCGAAGACTGCGCACCCGCGCCAGAATCGGGGAACAGATTGACATGAAGCTAATCGCCACACTGCGAAACGTGTACTCTATGCTCGCTAATACTAGCAACTTTTTGCGCTCCGGGAGAGTA---------------TGGCGCGACGGCTGGGGGGAGTTGCCCCTTTCGTGCGAGACCTATAAACATCGCGCAACGCAGATGGACGCCTTCCAGGAGCGCGAA------TCT...CCTGAGCTGAGCGACACGTTGTTTGCCATGTTTAAGACTCCCGAGCTGCTAGACGATCGTGGAGTG---ATATTGGAAGTTCACGCCTGGGCGCTTGACGCGCTGATGCTAAAGCTGCGCAACCTGAGTGTTTTTTGCGCTGATCTGAGC
KITH_EHV4/32-309 GGAGTTTATGGCATCGGTAAGAGCACGACGGGACGAGTTATGGCATCGGCTGCTAGCGGAGGA---AGTCCAACTCTATACTTTCCAGAGCCTATGGCGTACTGGCGGACTCTTTTTGAA...ACGGACGTAATTAGTGGTATTTACGACACCCAAAACCGGAAACAGCAGGGAAATTTGGCCGTTGAT---..................---GACGCGGCATTAATAACTGCGCATTACCAAAGCCGCTTTACCACGCCCTACCTGATACTCCACGATCACACTTGTACGTTGTTTGGGGGAAACAGCCTACAGCGTGGAACACAA---------CCG------......GACCTGACCCTTGTGTTTGACCGCCACCCGGTCGCCTCTACCGTATGCTTTCCAGCAGCCCGCTACCTACTCGGTGACATGTCAATGTGCGCGCTAATGGCTATGGTTGCTACTCTACCAAGAGAACCCCAGGGTGGTAACATTGTGGTTACCACCCTAAAT---GTAGAGGAGCATATACGGAGACTGCGTACGCGGGCTAGAATAGGAGAACAAATTGACATTACGCTGATTGCTACATTGCGAAATGTGTACTTTATGCTAGTTAATACATGTCACTTTTTGCGCTCTGGGCGAGTT---------------TGGCGCGACGGTTGGGGTGAGCTACCCACTTCCTGTGGGGCTTATAAGCATCGCGCCACACAGATGGACGCCTTCCAAGAGCGCGTT------TCA...CCGGAGCTGGGCGACACTCTGTTTGCCCTGTTTAAAACTCAAGAACTGCTAGACGATCGCGGTGTA---ATATTGGAAGTTCACGCTTGGGCGTTGGACGCGCTTATGCTAAAACTGCGTAACCTGAATGTTTTCAGTGCCGATTTAAGT
KITH_FHV1/27-305 GGTGCCTATGGAATAGGTAAGAGTTTAACGGCGAAGTACCTGGTCAGAGCGGATGAAAATCGACCGGGATATACTTACTACTTCCCAGAACCAATGCTATACTGGCGTAGTCTCTTTGAA...ACTGATGTTGTCGGTGGTATCTATGCCGTCCAGGACCGGAAACGACGTGGTGAATTATCAGCTGAA---..................---GATGCTGCCTATATCACCGCCCACTATCAAGCAAGATTTGCCGCACCATACCTTCTTTTACATTCCAGACTATCCACAATAACAGGATATCAGAAAGTTGTATGTGAGGAACAC---------CCC------......GACGTGACCCTAATCATAGATAGACACCCTCTCGCCTCTCTGGTCTGTTTCCCACTCGCAAGATATTTTGTGGGTGATATGACTCTTGGGTCTGTACTTAGTCTAATGGCAACACTTCCACGAGAACCTCCTGGTGGAAATCTAGTTGTAACAACCTTGAAT---ATCGAGGAACATTTGAAGCGTCTCAGGGGACGCTCAAGAACCGGAGAACAGATAGACATGAAGCTAATTCACGCACTACGCAATGTATATATGATGTTGGTACATACTAAGAAATTTTTAACAAAAAATACTAGT---------------TGGCGTGATGGGTGGGGGAAGCTTAAAATTTTCTCCCACTATGAACGGAATAGGCTCGTGGAAACTACAATAGTTTCCGATTCGACG------GAG...TCAGATTTATGTGACACATTATTCAGTGTTTTCAAAGCCCGGGAGCTCTCCGACCAAAATGGAGAT---CTACTTGACATGCATGCATGGGTCCTCGATGGACTTATGGAAACCCTCCAAAATTTACAGATCTTTACTTTAAATCTGGAA
KITH_BHV5/15-298 GGTGCGCACGGGCTGGGGAAGACGACGACGGGCCGCGCGCTCGCGGCCGCCGCCTCCGCCGCGGGGGGGCCCGTGCTCTTTTTTCCGGAGCCGATGGCGTACTGGCGCACGATGTTCCCT...ACGGACGCCTTAAGTGGGATCCTCGCCGCGTCTGCGCGCCGCGCCGCGGCCCAGGGGGGG---------..................---CGCGCGGACGCGGACGCGGCCGGCCTGGTCGCGTACTACCAGGCCCGGTTCGCGGCCCCGTACCTGGTGCTGCACGCGCGCGTGGCCGCGCTGCTGGCGCCGCCT---------GAGCCGGCGCCGGGCGGAgacgacGTCGTGACCCTCGTGTTTGACCGGCACCCCCTGGCCGCCTGCCTGTGCTACCCCTTCGCCCGCTACTGCCTCCGCGAGATCAACGCGGAGGACCTGCTCGCGCTCGCGGCCACCGCGCCCCTCGAGGCGCCCGGGGCCAACCTCGTCGTGTGCACCCTCCCC---CCGGCCGAGCAACAACGCCGCCTGGCGGCGCGAGCCCGGCCCGGGGACCGCGCGGACGCGGGCTTCTGGCCGCCGTTGCGCAACGCCTACGCGCTCCTGGCGAACACGTGCGCCTTCCTGGGCGCGGGGGGCGCG---------------TGGCGCGACGGCTGGGACGCGCTGGGGTGGGCGGACGCGGACGCGCTGGCCGCGCTCGCGGACCCCCGCGGCGGCGGGCGCGAGCCGGTGCCGGCG...CCGGCGCTGCGCGACACCCTGTTTGCGGCGCTCAAGTGCCGCGAGCTCTACCCCGGCGGCGGGGCGGACCTGCCCGCGGTCCACGCCTGGGCGCTGGACGCCCTGGCCGACCGCCTTGCGGCCCTCGAGGTCTTCATGGACGTGTCCGCG
KITH_BHV16/17-305 GGCGCGCACGGGCTGGGAAAGACAACAACGGGCCGCGCGCTCGCGGCCGCTTCCACCGCTGGGGAGGGC---GTGCTCTTTTTCCCGGAGCCGATGGCGTACTGGCGCACGATGTTTGGT...ACGGACGCCTTAAGTGGGATCCTCGCGGCGTCTGCGCGATGCGCCGCAGCCTCGCACGGGAGCGCACGCgcgcgg...cgggccggcGCACCGCGCAGACGCGGACGCGGCGGGCCTGGTTGCGTACTACCAGGCCAGGTTCGCGGCCCCGTACTTAATTTTGCACGCGCGCGTGTCCGCGCTGCTGCGCCGCCT---------GGGCCGGCGCCGGGCGGC......ACTGTGACCCTCGTGTTCGACCGCCACCCCGTGGCCGCGTGCCTCTGCTACCCCTTCGCCCGCTACTGCCTCCGCGAGATCAACGCGGAAGATCTGCTCATGCTCGCGGCCGCCATGCCCCCGGAAGCGCCCGGGGCCAACCTCGTCGTGTGCACCCTCCCC---CCGGCCGAGCAACAGCGCCGCCTGGCGGCGCGGGCCAGGCCCGGAGACCGCGCGGACGCGGGCTTTCTGGTCGCTGTGCGCAATGCTTACGCGCTCCTGGTGAACACGTGCGCTTTCCTGCGCGCGGGGGGCGAT---------------GGCGCGACGGCTGGGACGCGCTGGAGTGGGCGGACGCAAATGCATTGGCCGCGCTCGCAGACCCCAGTTGTGATGAATGCAAAA---TGCGCCGGC...GCCGGCCTGCGCGACACCCTGTTCGCGGCGCTCAAGTGCCGCGAGCTCTACCCGGGCGGCGGGACGGGCTTGCCCGCGGTTCACGCCTGGGCGCTGGACGCCCTGGCCGGCCGCCTCGCCGCCCTCGAGGTGTTCGTGCTGGACGTGTCC
KITH_SHV1/17-303 GGTCCCCACGGCGTTGGCAAGAGCACGACCGCCGAAGCTCTCGTTGCTCGATGTGAGCCGAGGCGGCCGATACGGTCTATGCTCCAGGAGCCGATGGCGTACTGGCGATCTACGTTCGCG...TCTGACGCGATCACCGAGATCTACGACACCCAACACCGCCTCGACTCGAACGAGATCACGGCGGCA---..................---GAAGCGGGTGCTTTTATGACTAGCCTCCAGCTGCATATGGGAACGCCTTACGCGCTGCTAGAGGAAGCTATGCGCCCTCACGTTGGGCGCGAGTTAGCGGAGCCTGATGACAACGGCCCCTTGCCGCAGAGG...cgaGACTTTGTCCTGGTCGTCGATCGACACGCGGTGGCGTCCATGGTGTGCTACCCGCTGGCGCGGTTTATGATGGGTTGCGTGTCGCTGCGGTCTGTCGCGTCGCTCATATCCCACCTCCCACCGCCGCTCCCCGGAACGAACTTAGTCGTGGCCTCTCTGGAC---TTCCGAGAGCACGCGGCGCGGCTGCGCGCGCGCGCGCGCCCCGGAGAGCGCTTGGATCTCACTATGATGGCCGCGATACGCAACGCGTACGCCATGTTAGCGAACACGTCGCGGTACCTGCTCTCCGGAGGCGAC---------------TGGCGGCGAGACTGGGGCTCGCTGCCAGTGTTTAAACCGAGCGCTTTCGTGGCCAGAGCCGCGAAAACCGCGTACACTCTGCCGCTGCGCGACGAG...CCCGGGCTCGCCGACACGCTGTTTGCCGCCTTGAAGGTACCCGAGTTTCTCGATGCGCGCGGGTAT---CCACGCGCGGCCCACGCGTGGACCCTGGACATCCTAGCCAACAGGATCAGAGCCTTGCGCGTCTACACGCTCGATCTGACG
KITH_HHV11/56-330 GGTCCCCACGGGATGGGGAAAACCACCACCACGCAACTGCTGGTGGCCCTGGGTTCG---CGC---GACGATATCGTCTACGTACCCGAGCCGATGACTTACTGGCGGGTGCTGGGGGCT...TCCGAGACAATCGCGAACATCTACACCACACAACACCGCCTCGACCAGGGTGAGATATCGGCCGGG---..................---GACGCGGCGGTGGTAATGACAAGCGCCCAGATAACAATGGGCATGCCTTATGCCGTGACCGACGCCGTTCTGGCTCCTCATATCGGGGGGGAGGCTGGGAGCTCA------CATGCCCCGCCCCCG------......GCCCTCACCCTCATCTTCGACCGCCATCCCATCGCCGCCCTCCTGTGCTACCCGGCCGCGCGGTACCTTATGGGCAGCATGACCCCCCAGGCCGTGCTGGCGTTCGTGGCCCTCATCCCGCCGACCTTGCCCGGCACCAACATCGTGCTTGGGGCCCTTCCG---GAGGACAGACACATCGACCGCCTGGCCAAACGCCAGCGCCCCGGCGAGCGGCTGGACCTGGCTATGCTGGCTGCGATTCGCCGCGTTTACGGGCTACTTGCCAATACGGTGCGGTATCTGCAGTGCGGCGGGTCG---------------TGGCGGGAGGACTGGGGACAGCTTTCGGGG------ACGGCCGTGCCGCCCCAGGGTGCCGAGCCCCAGAGC---AACGCG------GGCCCACGA...CCCCATATCGGGGACACGTTATTTACCCTGTTTCGGGCCCCCGAGTTGCTGGCCCCCAACGGCGAC---CTGTATAACGTGTTTGCCTGGGCCTTGGACGTCTTGGCCAAACGCCTCCGTTCCATGCACGTCTTTATCCTGGATTACGAC
KITH_HHV23/56-331 GGACCCCACGGGGTGGGGAAGACCACCACCTCCGCGCAGCTGATGGAGGCCCTGGGGCCGCGCGACAAT---ATCGTCTACGTCCCCGAGCCGATGACTTACTGGCAGGTGCTGGGGGCC...TCCGAGACCCTGACGAACATCTACAACACGCAGCACCGTCTGGACCGCGGCGAGATATCGGCCGGG---..................---GAGGCGGCGGTGGTAATGACCAGCGCCCAGATAACAATGAGCACGCCTTATGCGGCGACGGACGCCGTTTTGGCTCCTCATATCGGGGGGGAGGCTGTGGGCCCG------CAAGCCCCGCCCCCG------......GCCCTCACCCTTGTTTTCGACCGGCACCCTATCGCCTCCCTGCTGTGCTACCCGGCCGCGCGGTACCTCATGGGAAGCATGACCCCCCAGGCCGTGTTGGCGTTCGTGGCCCTCATGCCCCCGACCGCGCCCGGCACGAACCTGGTCCTGGGTGTCCTTCCG---GAGGCCGAACACGCCGACCGCCTGGCCAGACGCCAACGCCCGGGCGAGCGGCTTGACCTGGCCATGCTGTCCGCCATTCGCCGTGTCTACGATCTACTCGCCAACACGGTGCGGTACCTGCAGCGCGGCGGGAGG---------------TGGCGGGAGGACTGGGGCCGGCTGACGGGGGTCGCCGCGGCGACCCCGCGCCCCGACCCCGAGGACGGCGCGGGGTCTCTGCCCCGC---------...------ATCGAGGACACGCTGTTTGCCCTGTTCCGCGTTCCCGAGCTGCTGGCCCCCAACGGGGAC---TTGTACCACATTTTTGCCTGGGTCTTGGACGTCTTGGCCGACCGCCTCCTTCCGATGCATCTATTTGTCCTGGATTACGAT
KITH_BHV2H/11-273 GGTCCACACGGACTGGGTAAGACCACGGCGGCGTCCGCGCTGGCGTCCGAGCGT------------GGCGATGCGATATACCTGCCGGAGCCTATGTCGTACTGGAGTGGTGCGGGCGAA...GACGACCTGGTCGCTCGGGTGTATACCGCGCAGCACCGTATGGACCGAGGTGAGATAGACGCACGA---..................---GAAGCGGCGGGAGTAGTCCTGGGCGCTCAATTGACAATGAGCACACCGTATGTGGCGCTGAACGGCCTCATCGCACCTCATATCGGCGAGGAGCCCAGCCCCGGA------AACGCCACGCCTCCG------......GATTTAATCCTTATCTTCGATCGCCACCCTATCGCCTCGCTCCTCTGTTACCCGCTGGCTAGGTACCTTACTAGGTGCCTACCCATCGAATCCGTGCTGTCCCTCATCGCTCTGATACCGCCTACCCCACCCGGAACCAACTTAATCCTGGGAACGGCCCCG---GCAGAAGATCACCTATCACGTCTGGTAGCGCGCGGACGCCCCGGGGAACTCCCGGACGCACGAATGTTGCGTGCCATCCGGTACGTATACGCCCTGCTCGCCAACACCGTGAAGTACCTGCAGTCCGGTGGATCT---------------TGGCGCGCAGACTTGGGGAGCGAGCCGCCA---------------CGGCTTCCGCTGGCACCACCCGAGATC---GGAGACCCCAAT------AAC...CCCGGAGGGCACAACACCCTGCTGGCGCTGATCCACGGCGCT------GGGGCCACCCGCGGTTGC------GCCGCGATGACGTCGTGGACTCTAGACCTGCTGGCGGACCGACTGAGGTCAATGAACATGTTTACC------------
KITH_MEHVF/17-300 GGACCGTTTGGTATAGGCAAAACGTCTATACTAAACGCTATGCCCGACCACACGCCCGATGGG---GCTCCTATATTGAAAGTGTACGAACCAATGAAATATTGGAGATGCCAGTCT---...ACCGATTTGGTGGTAGCTGCCAACGAAACGCCAGAACGTAGGCGTGGTGGAGCTTTATCACGATTC---..................---CAATCTGACATGATCATGGCATCTATACAAGCCAGATTTGCCGATCCATATTTGCTTTTTCACGAACGGTTATCATCTAAATGTAGAGGAAAAATAGAAATATGC------------GATACTCCA------......GCAATTATATTAATGCTGGATAGGCACCCTGTGGCGGCGATATTATGTTTCCCAATCACTCGCTATTTACTTGGAGAATATTCTTTGGAAATGTTGATTAGCTCTATAATAAGACTTCCGTTGGAATCCCCCGGATGCAACCTGACAGTCACAATCCTTCCCGACGAAAAGGAACACGTTAATAGGATTTGTTCAAGAGATAGACCGGGTGAAACGGCAGATAGAAATATGCTCAGAACACTCAATGCCGTATACGCATCTTTGGTGGACACGGTTAAATACGCAAATCTAACATGCCCTTACGAGAAAGAAAGCTGGGAAATGGAATGGTTGGGACTTCCCTGGTTTGAAGAGTCATTACTTGAAGAATTCATCTCGCGTCCCCGCCCTGTTATTTGTTCGAGAACTCGA...ATGCCGCTGGACCGAACTCTCCTGGCCATTTTTAAACGGAAAGAGCTGTGTAGCGAAAATGGGGAG---CTGTTAACTCAGTATTCTTGGATATTGTGGGGATTACTGACTAAACTACACACCATTAATGTCGAATTATTTGACATTAGC
KITH_GAHVR/26-308 GGATCAATGGGTATAGGTAAAACGTCAATGTTGAATGAGATACCGACGCACTCTTTAATGGGA---GTACCCGTACTAAAGGTTTTCGAACCTATGAAATACTGGCGGTATTATTTT---...ACTGATTTGGTCACGACCGTAAATGATACATGTGATCGTCGTCGCAGGGGAGAGTTTTCTTTATTT---..................---CAATCTAGCATGATTGTAACAGCTTTACAATCAAAGTTTGCAGATCCCTATCTTGTATTTCATGAGCGCTTATCGTCGAAGTGTCATCGCATAACAGGAACACGT------------GGCAATCCA------......TCGCTTATATTAATTCTAGATCGACATCCCATATCCGCTACCGTATGTTTTCCCATTGCTCGACATTTAACTGGAGATTGTTCCTTGGAGATGCTAATTAGTATGATAATAAGGTTGCCCCAGGAACCGCCAGGATGCAACTTGGTGATTGTCGATCTACATGACGAAAAGGAGCATGTTAGCCGTCTATCTTCACGGAATAGGACCGGCGAGAAAACAGATCTACTAATGCTCAGGGCACTTAATGCAGTGTATTCCTGTTTAGTAGACACTATTATGTACGCAAATCATATTTGTCCCTACAGTAAGGATGAATGGGAATCTGAATGGTTGGATCTACCATGGTTTGATACATCTTTGGCCACAACGTTTATAAACGAACCTCGT---ACTGATTATCGCGGTAGTAGG...GTGTCATTACACCATACGCTTTTAGCGATATTTAAGCGGCGAGAATTATGTGCCGAAGATGGTAGC---TTATCAACAACGCATGCATGGATATTGTGGGGATTATTAATGAAACTGCGGAACATTAACGTCGAACGATTTAATATTACT
KITH_ILTVT/36-320 GGGCCATTCGGAGTCGGTAAAACAGTCACTGCAAAGACGTTGATGCAAATGCCAAATTGGAGA---GGTTGCCGTCTATACTTAGCGGAACCTATGCAAGCATGGCGCCAATGGTTTGGCggaGCGGATATGATCAAAGAAATTAATGAAATACAAACCCTAAAGGCTTCCGGAAAACTTGAATGTCGG---..................GAGGCGTCTCCGGTTGCCGTAGCGGAAGTTCAGATGACTATTGCTGCCCCACTAAGAATAATGAACCACGTCATTTATAATTATTTGGGATCTGAACGCTGCTACAGC---GCAGCTGCATCCGGACCAGAT---......GATGTCTTATTCCTCGTAGATAGGCACCCACTCGCGGCATGTTTGTGTTTCCCTGTTGCACAATATCTAAGCGGAGCGCTCGAATTTGGAGATTTAATAACTTTATTGTCAGGAATTCCTGACATTCCAACACACTCCAACATTGTTTTAATGGATTTGGAT---ATTTGCGAACAGGCACGGCGTATAATACAAAGGGGGCGCCCAGGGGAAACGGTCGACTGGACGTATTTGTGTGCATTACGTAACTCGTACATCTGCCTCATGAATACTACCACCTACCTCCAACGTACATCT------------------TATCCAGCATTGTTGAAGGAGCAAGAAGCCTTAACAAGTGCCACGCTCTTAAAATTCAAGAGAGAGTGCTTAGAAACTGCTACTGTTCCAGAAATCaatCCTTCAATCGACCAGACGCTATTTGCAATATTAGCTTTTGAT---CAGCAAAATGTTCACGGGGAAAGATTAAAAACTGTACTTTCATTTGTGGTTCAAAAACTCGCGACGGTATTGAAAAACTTGTGCATTTTTTACTTACCAGCACAT