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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00690 phylogeny
for amino acid alignment


 
((((((((((((Q97H76_CLOAB/1-64,((Q988T1_RHILO/32-113,Q95022_CRYPV/205-287),Q27721_PLAFA/108-193)),(((P74062_SYNY3/9-89,Q59999_SYNY3/16-98),ATCL_SYNP7/11-92),(((((ATN5_YEAST/8-90,P78981_ZYGRO/5-85),Q9UUX8_NEUCR/71-151),(O13397_DEBOC/17-104,(O13398_DEBOC/23-111,Q9C1R0_DEBHA/35-122))),Q9UUX7_NEUCR/17-97),ATC3_SCHPO/4-80))),(((((Q9GV97_TOXGO/5-86,((O43134_BLAEM/6-96,Q9W248_DROME/34-119),(((O16436_CAEEL/29-120,O16331_CAEEL/31-120),Q95024_DICDI/2-88),(((((ATNA_DROME/51-134,O76154_DUGJA/32-115),(Q9GPG2_CALSI/49-132,(AT1A_ARTSF/10-92,P90735_CAEEL/11-94))),(O45240_CAEEL/49-132,(Q9SXK5_9STRA/18-100,Q9U458_DROME/22-105))),AT1A_HYDAT/39-122),(((AT12A_RAT/46-129,AT12A_BUFMA/52-134),(ATP4A_RAT/41-124,ATP4A_XENLA/39-122)),(AT1A1_CATCO/36-119,(((((AT1A4_HUMAN/41-124,AT1A4_MOUSE/42-125),AT1A2_HUMAN/31-114),AT1A3_CHICK/20-103),(Q98SL3_ELEEL/19-102,Q9DEY3_BRARE/34-117)),AT1A1_BUFMA/33-116))))))),(O15637_TRYCR/32-110,Q9FNS3_CHLRE/4-72)),(((((PMA1_NEUCR/61-145,(O93862_EMENI/75-152,PMA1_AJECA/61-141)),((PMA1_CANAL/38-122,O94195_PICAN/42-124),((PMA2_YEAST/86-174,PMA1_KLULA/41-126),(PMA1_SCHPO/59-143,PMA2_SCHPO/147-231)))),Q01680_PNECA/18-102),((((PMA10_ARATH/14-94,Q9SWH0_NICPL/13-94),(((PMA5_ARATH/4-85,((PMA8_ARATH/8-89,P93265_MESCR/11-92),PMA1_ARATH/4-85)),((PMA1_LYCES/10-90,PMA7_ARATH/9-89),Q9SWH1_NICPL/11-92)),(PMAX_ARATH/8-91,Q9SWH2_NICPL/11-92))),((O74242_CRYNE/71-152,O14437_UROFA/41-122),(PMA1_DUNAC/26-109,PMA1_DUNBI/26-105))),(O04956_CYACA/44-123,PMA1_DICDI/154-241))),(Y1226_METJA/1-75,Q9HJC5_THEAC/1-74))),(P73273_SYNY3/11-89,O27560_METTH/1-80)),(((Q9P8N3_ASPNG/31-115,Q9UUX9_NEUCR/48-131),(((ATC1_YARLI/19-102,Q9P872_CANAL/14-96),((O74296_KLULA/22-108,(O94117_PICAN/24-109,ATC1_YEAST/27-113)),ATC1_SCHPO/1-79)),(((Q9XTG4_CAEEL/3-83,AT2C2_HUMAN/71-147),AT2C1_BOVIN/56-133),Q9VNR2_DROME/4-81))),(((CTPF_MYCTU/1-89,Q9I3R5_PSEAE/1-89),(O26581_METTH/8-85,(ATMB_SALTY/22-103,Q9HUY5_PSEAE/13-98))),(Q48415_KLEPN/12-89,ATA1_SYNY3/2-85))))),((Q97PQ2_STRPN/20-98,Q9A0T9_STRPY/1-82),O27082_METTH/1-78)),(Q9CFU9_LACLA/2-75,(O34431_BACSU/4-76,Q9K9X9_BACHD/9-76))),((((Q9LIV9_ORYSA/12-96,ECA4_ARATH/16-98),(ECA2_ARATH/1-81,Q42883_LYCES/1-81)),(((ATC_PLAFK/3-81,Q27764_9APIC/3-81),((ECA3_ARATH/3-77,(ATC1_DUNBI/18-100,Q9UUY0_NEUCR/3-77)),(((((O17315_PROCL/1-76,(O04938_ORYSA/1-76,((AT2A3_CHICK/1-77,AT2A3_HUMAN/2-77),((AT2A1_CHICK/2-77,(AT2A2_CANFA/3-77,(AT2A1_MAKNI/3-77,Q9DDB8_RANSY/3-77))),AT2A1_HUMAN/1-77)))),O96039_PATYE/1-76),Q27779_SCHMA/4-78),(((ATC_ARTSF/4-77,ATC1_DROME/2-77),O96696_HELVI/3-77),O96527_SCHMA/3-77)),Q9XU13_CAEEL/3-76))),(O09489_LEIAM/21-96,(O96608_TRYCR/2-83,ATC_TRYBB/4-83)))),O76974_PARTE/4-83)),(((Q97JK5_CLOAB/1-75,Q9PQM7_UREPA/1-68),Q98R55_MYCPU/1-73),((Q9CDH2_LACLA/1-80,Q9CHP9_LACLA/2-76),Q95060_TRIVA/1-77))),(((Q27642_ENTHI/37-119,(((ACA4_ARATH/103-183,ACA11_ARATH/106-183),Q9FVE8_SOYBN/108-189),((O76833_CAEEL/24-103,(Q9V4C7_DROME/31-106,(AT2B2_OREMO/42-120,((AT2B1_HUMAN/44-123,(AT2B2_HUMAN/43-120,AT2B3_HUMAN/44-123)),AT2B4_HUMAN/39-121)))),O76832_CAEEL/20-104))),ATC1_DICDI/30-116),O60948_TRYCR/60-141)),Q9CG53_LACLA/21-106),(ATCY_SCHPO/133-218,Q9N323_CAEEL/159-235)),O61136_LEIDO/17-101),ATMA_SALTY/43-118,ATMA_ECOLI/41-114);
((((((((((((Q97H76_CLOAB/1-64:0.64343,((Q988T1_RHILO/32-113:0.83159,Q95022_CRYPV/205-287:0.77921):0.11052,Q27721_PLAFA/108-193:0.74182):0.20132):0.07077,(((P74062_SYNY3/9-89:0.59633,Q59999_SYNY3/16-98:0.47209):0.11418,ATCL_SYNP7/11-92:0.32332):0.61130,(((((ATN5_YEAST/8-90:0.32444,P78981_ZYGRO/5-85:0.33658):0.30112,Q9UUX8_NEUCR/71-151:0.58146):0.13216,(O13397_DEBOC/17-104:0.39368,(O13398_DEBOC/23-111:0.27226,Q9C1R0_DEBHA/35-122:0.26049):0.06814):0.38417):0.10037,Q9UUX7_NEUCR/17-97:0.62556):0.12864,ATC3_SCHPO/4-80:0.60505):0.11956):0.16768):0.08994,(((((Q9GV97_TOXGO/5-86:1.12345,((O43134_BLAEM/6-96:0.67044,Q9W248_DROME/34-119:1.12907):0.13807,(((O16436_CAEEL/29-120:0.27387,O16331_CAEEL/31-120:0.26045):0.39326,Q95024_DICDI/2-88:0.67057):0.25486,(((((ATNA_DROME/51-134:0.16240,O76154_DUGJA/32-115:0.31059):0.07218,(Q9GPG2_CALSI/49-132:0.10973,(AT1A_ARTSF/10-92:0.25291,P90735_CAEEL/11-94:0.29408):0.10996):0.04686):0.07093,(O45240_CAEEL/49-132:0.55561,(Q9SXK5_9STRA/18-100:0.59631,Q9U458_DROME/22-105:0.54007):0.05223):0.12144):0.09107,AT1A_HYDAT/39-122:0.30967):0.05004,(((AT12A_RAT/46-129:0.23684,AT12A_BUFMA/52-134:0.09695):0.12053,(ATP4A_RAT/41-124:0.17087,ATP4A_XENLA/39-122:0.11322):0.43682):0.07694,(AT1A1_CATCO/36-119:0.08852,(((((AT1A4_HUMAN/41-124:0.14545,AT1A4_MOUSE/42-125:0.12683):0.13283,AT1A2_HUMAN/31-114:0.06115):0.04810,AT1A3_CHICK/20-103:0.17338):0.03608,(Q98SL3_ELEEL/19-102:0.14155,Q9DEY3_BRARE/34-117:0.13420):0.04815):0.03560,AT1A1_BUFMA/33-116:0.09057):0.06790):0.11664):0.10443):0.27761):0.12868):0.23236):0.12779,(O15637_TRYCR/32-110:0.32326,Q9FNS3_CHLRE/4-72:0.55738):0.31692):0.07709,(((((PMA1_NEUCR/61-145:0.17524,(O93862_EMENI/75-152:0.68363,PMA1_AJECA/61-141:0.10837):0.09147):0.02399,((PMA1_CANAL/38-122:0.12458,O94195_PICAN/42-124:0.16552):0.08972,((PMA2_YEAST/86-174:0.31006,PMA1_KLULA/41-126:0.05646):0.07411,(PMA1_SCHPO/59-143:0.15878,PMA2_SCHPO/147-231:0.21099):0.13428):0.03215):0.04653):0.12153,Q01680_PNECA/18-102:0.14930):0.69642,((((PMA10_ARATH/14-94:0.29931,Q9SWH0_NICPL/13-94:0.12498):0.11294,(((PMA5_ARATH/4-85:0.25563,((PMA8_ARATH/8-89:0.12195,P93265_MESCR/11-92:0.11595):0.09039,PMA1_ARATH/4-85:0.10409):0.02137):0.00000,((PMA1_LYCES/10-90:0.09614,PMA7_ARATH/9-89:0.19870):0.09502,Q9SWH1_NICPL/11-92:0.16271):0.08686):0.06562,(PMAX_ARATH/8-91:0.45165,Q9SWH2_NICPL/11-92:0.23392):0.01490):0.02909):0.05256,((O74242_CRYNE/71-152:0.23214,O14437_UROFA/41-122:0.15826):0.23593,(PMA1_DUNAC/26-109:0.08264,PMA1_DUNBI/26-105:0.28544):0.43689):0.08562):0.15675,(O04956_CYACA/44-123:0.35885,PMA1_DICDI/154-241:0.62237):0.11414):0.13199):0.21153,(Y1226_METJA/1-75:0.44562,Q9HJC5_THEAC/1-74:0.53518):0.09534):0.28843):0.13675,(P73273_SYNY3/11-89:0.49788,O27560_METTH/1-80:0.49560):0.15565):0.06622,(((Q9P8N3_ASPNG/31-115:0.26137,Q9UUX9_NEUCR/48-131:0.49544):0.17739,(((ATC1_YARLI/19-102:0.30760,Q9P872_CANAL/14-96:0.58484):0.05568,((O74296_KLULA/22-108:0.29942,(O94117_PICAN/24-109:0.59400,ATC1_YEAST/27-113:0.28781):0.12480):0.13928,ATC1_SCHPO/1-79:0.67312):0.12006):0.19864,(((Q9XTG4_CAEEL/3-83:0.39701,AT2C2_HUMAN/71-147:0.49152):0.16087,AT2C1_BOVIN/56-133:0.34808):0.09498,Q9VNR2_DROME/4-81:0.46249):0.29081):0.22438):0.18287,(((CTPF_MYCTU/1-89:0.56316,Q9I3R5_PSEAE/1-89:0.69783):0.22789,(O26581_METTH/8-85:0.63551,(ATMB_SALTY/22-103:0.46055,Q9HUY5_PSEAE/13-98:0.54146):0.52651):0.10392):0.04797,(Q48415_KLEPN/12-89:0.52501,ATA1_SYNY3/2-85:0.98934):0.20396):0.12479):0.12143):0.19265):0.08269,((Q97PQ2_STRPN/20-98:0.34762,Q9A0T9_STRPY/1-82:0.23083):0.42029,O27082_METTH/1-78:0.47422):0.10189):0.08177,(Q9CFU9_LACLA/2-75:0.43917,(O34431_BACSU/4-76:0.05210,Q9K9X9_BACHD/9-76:0.58100):0.41509):0.24714):0.09062,((((Q9LIV9_ORYSA/12-96:0.66618,ECA4_ARATH/16-98:0.23120):0.19692,(ECA2_ARATH/1-81:0.20926,Q42883_LYCES/1-81:0.14314):0.17882):0.11737,(((ATC_PLAFK/3-81:0.13644,Q27764_9APIC/3-81:0.34137):0.31815,((ECA3_ARATH/3-77:0.26171,(ATC1_DUNBI/18-100:0.61179,Q9UUY0_NEUCR/3-77:0.30280):0.06490):0.16300,(((((O17315_PROCL/1-76:0.28304,(O04938_ORYSA/1-76:0.49692,((AT2A3_CHICK/1-77:0.13013,AT2A3_HUMAN/2-77:0.34871):0.06878,((AT2A1_CHICK/2-77:0.19804,(AT2A2_CANFA/3-77:0.19789,(AT2A1_MAKNI/3-77:0.16851,Q9DDB8_RANSY/3-77:0.10095):0.02077):0.05959):0.07079,AT2A1_HUMAN/1-77:0.08522):0.11458):0.06636):0.06577):0.00853,O96039_PATYE/1-76:0.21907):0.09237,Q27779_SCHMA/4-78:0.42215):0.10171,(((ATC_ARTSF/4-77:0.21107,ATC1_DROME/2-77:0.19939):0.07327,O96696_HELVI/3-77:0.08548):0.00000,O96527_SCHMA/3-77:0.26068):0.01991):0.09192,Q9XU13_CAEEL/3-76:0.29214):0.07883):0.11483):0.07858,(O09489_LEIAM/21-96:0.60658,(O96608_TRYCR/2-83:0.31015,ATC_TRYBB/4-83:0.26653):0.07442):0.46534):0.09182):0.07849,O76974_PARTE/4-83:0.56812):0.13487):0.04205,(((Q97JK5_CLOAB/1-75:1.03589,Q9PQM7_UREPA/1-68:0.34890):0.40414,Q98R55_MYCPU/1-73:0.37239):0.29213,((Q9CDH2_LACLA/1-80:0.87495,Q9CHP9_LACLA/2-76:0.58886):0.13030,Q95060_TRIVA/1-77:0.52122):0.17592):0.04603):0.10251,(((Q27642_ENTHI/37-119:0.79735,(((ACA4_ARATH/103-183:0.22845,ACA11_ARATH/106-183:0.12294):0.42847,Q9FVE8_SOYBN/108-189:0.26997):0.30430,((O76833_CAEEL/24-103:0.29075,(Q9V4C7_DROME/31-106:0.33066,(AT2B2_OREMO/42-120:0.26761,((AT2B1_HUMAN/44-123:0.05297,(AT2B2_HUMAN/43-120:0.25799,AT2B3_HUMAN/44-123:0.07580):0.30808):0.11754,AT2B4_HUMAN/39-121:0.16346):0.06994):0.05358):0.19597):0.09448,O76832_CAEEL/20-104:0.36655):0.34583):0.15225):0.11993,ATC1_DICDI/30-116:0.97766):0.06056,O60948_TRYCR/60-141:0.82930):0.26068):0.27925,Q9CG53_LACLA/21-106:0.58300):0.20158,(ATCY_SCHPO/133-218:1.41205,Q9N323_CAEEL/159-235:1.16141):0.43364):0.16743,O61136_LEIDO/17-101:1.24442):0.62192,ATMA_SALTY/43-118:0.17332,ATMA_ECOLI/41-114:0.15157);