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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00677 alignment
(20 sequences with 97 aa)


RISA_YEAST/106-195 QGHVDTVANIVSRRPE......GNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLTIIKVDplsqGGAFYISMIKHTQD.NVIMPLKKIGDEVNIEVD
RISA_PHOPO/100-184 SGHVDAVAEVIECRTS......GRAIDIWIRVP-SQIEKYLSEKGSVTVDGVSLTVNAVT....GNEFKLTIVPHTVV.ETTIADFKVGNKVNIEVD
RISA_PHOLE/100-184 SGHVDGVGEVIEFKRN......GRAINIWVAVP-VQLKKYLSEKGSVTIDGISLTINAVY....QNVIKLTIVPHTLA.ETNLVNINIDKKVNVEID
RISA_HAEIN/100-185 SGHIYCTAKISDIIAS......ENNRQIWFELPSADVMKYILTKGFVAVDGISLTIGEVR....DTQFCVNLIPETLQ.RTLMGRRKVGDIVNIEID
RISA_ECOLI/100-185 SGHIMTTAEVAKILTS......ENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVT....PTRFCVHLIPETLE.RTTLGKKKLGARVNIEID
RISA_BACSU/99-183 SGHVDGTAEITRIEEK......SNAVYYDLKMD-PSLTKTLVLKGSITVDGVSLTIFGLT....EDTVTISLIPHTIS.ETIFSEKTIGSKVNIECD
RISA_ACTPL/99-183 SGHIDGTGEIAEITPA......HNSTWYRIKTS-PKLMRYIIEKGSITIDGISLTVVDTD....DESFRVSIIPHTIK.ETNLGSKKIGSIVNLEND
LUXY_VIBFI/101-185 SARISCVASIIEIIEN......EDYQQMWIQIP-ENFTEFLIDKDYIAVDGISLTIDTIK....NNQFFISLPLKIAQ.NTNMKWRKKGDKVNVELS
LUXP_PHOPO/99-183 TGNIKGVATVDNITEE......EDLLKVYIKIP-KDLIENISSEDHIGINGVSNSIEEVS....NDIICINYPKNLSI.TTNLGTLETGSEVNVETL
LUXP_PHOLE/99-183 TGNIKGTALVAAIEEN......DAGFSVLIDIP-KGLAENLTVKDDIGIDGISLPITDMS....DSIITLNYSRDLLA.STNIASLAKDVKVNVEIL
RISA_YEAST/3-93 TGIVECMGTVLENNPYddsesgGQGVSITIGNAGSILTDCHVG-DSIAVNGVCLTVTEFN....NDSFKVGISPETIK.RSNVASWIQGTQVNLERA
RISA_BACSU/3-86 TGIIEETGTIESMKKA......GHAMALTIK-CSKILEDVHLG-DSIAVNGICLTVTDFT....KNQFTVDVMPETVK.ATSLNDLTKGSKVNLERA
RISA_ACTPL/3-86 TGIIEEVGKIAQIHKQ......GEFAVVTIN-ATKVLQDVHLG-DTIAVNGVCLTVTSFS....SNQFTADVMSETLK.RTSLGELKSNSPVNLERA
RISA_PHOPO/3-87 TGIIEAVGNISAITSK......GSDFEVSVNCDTLDLADVKIG-DSIATNGICLTVVKLT....ANSYVADLSIETLS.RTAFNYYKVGQAVNLEKA
RISA_PHOLE/3-87 TGIIESIGNIGAIIRH......NEDLSIVVNTNNLDISDVNIG-DSIATNGVCLTVSKLL....PSGYTADLSLETYK.RTAFHSYRIGQEVNLEKA
RISA_HAEIN/3-87 TGIVQGTAPIHSIKEK......ANFRTQVVKLLPEMRKDLEIG-ASIANNGVCLTVTEIN....GDLVSFDLMQETLK.ITNLGTVKVGDYVNIERA
RISA_ECOLI/3-87 TGIVQGTAKLVSIDEK......PNFRTHVVELPDHMLDGLETG-ASVAHNGCCLTVTEIN....GNHVSFDLMKETLR.ITNLGDLKVGDWVNVERA
LUXY_VIBFI/3-88 KGIVEGIGIIEKIDIY......TDLDKYAIRFPENMLNGIKKE-SSIMFNGCFLTVTSVN....SNIVWFDIFEKEARkLDTFREYKVGDRVNLGTF
LUXP_PHOPO/3-86 KGIVQGVGIIKKISKN......DDTQRHGITFPKDILDSVEKD-TVMLVNGCSVTVVRIT....GDVVYFDIDQAIN-.TTTFRKLEVGNKVNLEVR
LUXP_PHOLE/3-86 RGIVQGRGVIRSISKS......EDSQRHGIAFPEGMFQLVDVD-TVMLVNGCSLTVVRIL....GDMVYFDIDQALG-.TTTFDGLKEGDQVNLEIH