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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00665 - rve)
Integrase core domain
(Pfam reference: accession no. PF00665)
(Interpro reference: accession no. IPR001584)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
254 sequences @ 273 aa
(ave. pairwise identity: 0.18)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 165.42)
nucleotides
(available for above)
241 sequences @ 819 bp
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 117.78)
amino acids, restricted set
(corresp. to available nt seqs)
241 sequences @ 273 aa
(ave. pairwise identity: 0.18)
New Hampshire format
(total tree length: 159.18)