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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00661 - Matrix) |
| Viral matrix protein |
| (Pfam reference: accession no. PF00661) |
| (Interpro reference: accession no. IPR000982) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
13 sequences @ 356 aa (ave. pairwise identity: 0.31) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 7.68) |
| nucleotides (available for above) |
12 sequences @ 1068 bp (ave. pairwise identity: 0.42) |
New Hampshire format (total tree length: 5.66) |
|
amino acids, restricted set (corresp. to available nt seqs) |
12 sequences @ 356 aa (ave. pairwise identity: 0.31) |
New Hampshire format (total tree length: 7.07) |