EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00658 alignment
(7 sequences with 246 bp)

`PABP_YEAST/489-562`	`TTCCCAAGAAATGCCAACGATAACAAC---CAATTTTATCAACAAAAG---------------------CAAAGACAAGCTTTGGGTGAACAATTATACAAGAAGGTTTCTGCTAAGACTTCAAATGAAGAAGCAGCTGGTAAAATTACTGGTATGATTTTGGATTTGCCACCTCAAGAGGTCTTCCCATTGTTGGAAAGTGATGAATTGTTCGAACAACACTACAAAGAAGCTTCTGCTGCCTAT`
`PABP_SCHPO/570-641`	`GAAAGATTCACGGCTGCTGATTTGGCT---GCCGTTCCAGAGGAAAGC---------------------AGGAAGCAGGTCCTTGGTGAGCTTCTTTACCCTAAGGTTTTCGTTCGT------GAGGAAAAACTCTCTGGTAAAATTACCGGTATGTTGTTGGAGATGCCTAATTCCGAGTTATTGGAGTTACTTGAGGATGACTCCGCTCTTAATGAAAGAGTCAACGAAGCTATTGGGGTTTTG`
`PABP1_HUMAN/543-614`	`GAACCTTTGACTGCTTCCATGTTGGCA---TCTGCCCCTCCTCAAGAG---------------------CAAAAGCAAATGTTGGGTGAACGGCTGTTTCCTCTTATTCAAGCCATG------CACCCTACTCTTGCTGGTAAAATCACTGGCATGTTGTTGGAGATTGATAATTCAGAACTTCTTCATATGCTCGAGTCTCCAGAGTCACTCCGTTCTAAGGTTGATGAAGCTGTAGCTGTACTA`
`PABP_DROME/551-622`	`GAGAAGCTCATTGCCTCGTTGCTGGCC---AACGCCAAGCCGCAGGAG---------------------CAGAAACAGATCCTGGGCGAGCGTCTGTATCCGATGATTGAGCATATG------CACGCCAATTTGGCTGGTAAGATCACCGGCATGTTGTTGGAGATCGAAAACTCTGAGCTCTTGCACATGATCGAGGATCAGGAGGCCCTTAAGGCCAAGGTGGAGGAGGCTGTGGCCGTGCTT`
`PABP2_ARATH/540-611`	`ATTGGAGCTTTGGCTTCAAATCTGTCT---AATGCTACTCCAGAGCAA---------------------CAGAGGACGATGCTGGGTGAGGTGCTGTACCCGTTGGTGGAGCAGGTT------GAGGCAGAGTCTGCAGCCAAAGTGACTGGGATGCTTTTGGAGATGGACCAGACTGAAGTGCTCCATCTGTTGGAGTCACCAGAAGCTCTCAAGGCCAAAGTTGCAGAGGCTATGGATGTTCTC`
`PABP5_ARATH/575-646`	`ATTTCTAAGCTCGCATCTGATTTGGCT---TTGGCTAGCCCCGACAAA---------------------CACCCACGGATGCTTGGGGATCATCTTTACCCACTTGTGGAGCAGCAG------GAGCCAGCAAATGCTGCTAAAGTTACCGGGATGTTGCTGGAGATGGATCAAGCTGAGATTTTGCACCTTCTTGAGTCACCTGAAGCTCTTAAGGCTAAAGTGTCCGAGGCTCTGGATGTTCTC`
`HYD_DROME/2487-2566`	`AGACCGTATACTCCACCAAATAGCTCAGATAATGCTACGCCGGAAAGCCTGAATGATCACTTGTCCGTTCACCTACAACAAATTGGGGAACGTCTTTACCCGAAGATCCATTCGATA------AACCAAACGCATGCACCGAAGATAACAGGAATGCTGCTGGAGATACCCACTCCGCAGCTCCTGTCCGTAATTTCCTCAGATGAGACGCTCCGTCAGAAAGTGAATGAAGCGATAGAAATAATC`