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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00656 phylogeny
for restricted amino acid alignment


 
((((((((((((((P74453_SYNY3/40-299,((Q7NPG1_GLOVI/7-278,((Q7RFI8_PLAYO/964-1364,(((((Q6BH13_DEBHA/146-437,(O74477_SCHPO/130-422,((Q6CLS0_KLULA/161-453,(Q08601_YEAST/157-450,Q6FPX9_CANGA/98-389)),Q75B43_ASHGO/154-449))),Q6C2Y6_YARLI/168-458),((O81911_ARATH/80-386,Q7XC24_ORYSA/76-374),Q7XJE5_ARATH/116-414)),((Q8IEW1_9TRYP/63-322,Q8T8E6_9TRYP/84-343),Q8T8E8_9TRYP/84-341)),((Q9SA41_ARATH/3-378,(O64520_ARATH/3-386,((O64518_ARATH/3-408,O64519_ARATH/3-366),((Q70VV0_PICAB/3-415,Q9ZSP8_HEVBR/3-415),O64517_ARATH/3-416)))),Q8LCR8_ARATH/5-316))),Q74F93_GEOSL/6-270)),((Q87Z21_PSESM/2-225,Q7WDK3_BORBR/552-800),(Q53839_STRCO/9-268,Q82I86_STRAW/5-276)))),Q8YS65_ANASP/4-245),(Q9GPM2_DICDI/188-405,Q86JK1_DICDI/22-316)),((((Q6NBN5_RHOPA/57-277,Q89XE4_BRAJA/58-278),(Q6N0T4_RHOPA/30-251,Q89XG2_BRAJA/27-248)),(Q98JS7_RHILO/35-253,(Q98CE0_RHILO/5-238,((((Q6N5Q1_RHOPA/33-253,Q89KP2_BRAJA/86-307),Q985X8_RHILO/35-256),((Q6N329_RHOPA/73-298,Q89FZ4_BRAJA/32-256),Q89HT8_BRAJA/51-272)),((Q98IJ6_RHILO/11-238,(Q98G71_RHILO/26-252,((Q89HP3_BRAJA/336-569,Q98IJ9_RHILO/30-261),Q89IK1_BRAJA/30-253))),(Q6AKF4_DESPS/28-248,Q89MV1_BRAJA/176-400)))))),(Q19719_CAEEL/252-476,(Q8BFT0_MOUSE/340-577,Q9DDL2_BRARE/323-560)))),(Q7QGM9_ANOGA/4-212,(Q9NBW3_DROME/38-248,Q9V9J6_DROME/313-523))),(Q9GV89_HYDAT/93-318,Q8I749_SUBDO/254-491)),(((CASPE_MOUSE/22-256,CASPE_HUMAN/18-241),((Q9DDJ2_BRARE/174-400,Q9I9L7_BRARE/145-379),((O42284_CHICK/42-279,(((CASPC_MOUSE/176-415,(CASP1_FELCA/161-406,((CASPD_BOVIN/136-373,CASP5_HUMAN/177-414),CASP1_CANFA/163-400))),CASP4_MOUSE/132-369),(CASP1_MOUSE/162-398,(CASP1_HUMAN/163-400,CASP1_PIG/163-400)))),CAS1A_XENLA/144-382))),(O55194_RAT/200-445,((O18203_CAEEL/293-532,Q9TZP5_CAEEL/26-261),(CED3_CAEEL/243-494,Q9Y1U6_PRIPA/173-413))))),ICENC_DROME/196-443),((((Q8ITP3_BRAFL/87-323,(Q8ITP2_BRAFL/151-396,(((CASP6_MOUSE/28-270,O93415_CHICK/57-299),Q9I8S9_ONCMY/57-297),Q9IB66_XENLA/58-298))),((O88550_RAT/68-301,Q6DCI2_XENLA/78-314),(Q9GV88_HYDAT/84-316,((Q8JG42_FUGRU/51-279,Q98UI8_BRARE/48-280),(Q8JIS8_ORYLA/58-285,(O93417_CHICK/53-281,CASP3_XENLA/56-280)))))),(((((Q7PZJ9_ANOGA/20-250,Q7QKT2_ANOGA/35-260),Q9NHF9_DROME/56-302),(Q7PV92_ANOGA/18-255,Q86FL0_ANOST/52-286)),Q7Q803_ANOGA/54-306),(Q7Q1E0_ANOGA/53-282,((CASP1_SPOFR/61-293,(ICE_DROME/94-328,CASP1_DROME/79-313)),Q7Q4X6_ANOGA/73-309)))),(((CASP9_HUMAN/161-413,Q90WU0_CHICK/148-400),Q9IB63_XENLA/144-396),Q8I6Y2_GEOCY/158-414))),(Q6E5N8_ICTPU/119-362,((Q6PAD9_XENLA/268-495,Q9I8J3_BRARE/238-473),((CASP8_MOUSE/236-478,CASP8_HUMAN/234-476),Q90WU1_CHICK/237-479)))),Q9IB64_XENLA/261-494),Q6NTR7_XENLA/280-494),CFLAR_MOUSE/257-481),CFLAR_HUMAN/252-477,Q6QN97_PIG/259-484);
((((((((((((((P74453_SYNY3/40-299:1.32041,((Q7NPG1_GLOVI/7-278:1.08735,((Q7RFI8_PLAYO/964-1364:1.26735,(((((Q6BH13_DEBHA/146-437:0.18558,(O74477_SCHPO/130-422:0.25478,((Q6CLS0_KLULA/161-453:0.12502,(Q08601_YEAST/157-450:0.06642,Q6FPX9_CANGA/98-389:0.10999):0.03974):0.05330,Q75B43_ASHGO/154-449:0.17716):0.04981):0.05060):0.05396,Q6C2Y6_YARLI/168-458:0.13785):0.14803,((O81911_ARATH/80-386:0.11804,Q7XC24_ORYSA/76-374:0.09814):0.12022,Q7XJE5_ARATH/116-414:0.24022):0.46556):0.22801,((Q8IEW1_9TRYP/63-322:0.36848,Q8T8E6_9TRYP/84-343:0.25111):0.10389,Q8T8E8_9TRYP/84-341:0.42843):0.31586):0.18103,((Q9SA41_ARATH/3-378:0.32346,(O64520_ARATH/3-386:0.13179,((O64518_ARATH/3-408:0.09065,O64519_ARATH/3-366:0.11471):0.05211,((Q70VV0_PICAB/3-415:0.24735,Q9ZSP8_HEVBR/3-415:0.13312):0.03581,O64517_ARATH/3-416:0.11960):0.05708):0.09025):0.04394):0.12074,Q8LCR8_ARATH/5-316:0.47295):0.49012):0.14320):0.33981,Q74F93_GEOSL/6-270:1.01528):0.24110):0.17430,((Q87Z21_PSESM/2-225:0.92239,Q7WDK3_BORBR/552-800:1.13792):0.11358,(Q53839_STRCO/9-268:1.35270,Q82I86_STRAW/5-276:1.01368):0.11963):0.19485):0.33357):0.09360,Q8YS65_ANASP/4-245:1.16515):0.16612,(Q9GPM2_DICDI/188-405:1.24731,Q86JK1_DICDI/22-316:0.81888):0.63392):0.10039,((((Q6NBN5_RHOPA/57-277:0.36299,Q89XE4_BRAJA/58-278:0.17872):0.26052,(Q6N0T4_RHOPA/30-251:0.18659,Q89XG2_BRAJA/27-248:0.18560):0.19201):0.48053,(Q98JS7_RHILO/35-253:0.82367,(Q98CE0_RHILO/5-238:0.77580,((((Q6N5Q1_RHOPA/33-253:0.20138,Q89KP2_BRAJA/86-307:0.09086):0.19179,Q985X8_RHILO/35-256:0.19396):0.49307,((Q6N329_RHOPA/73-298:0.21565,Q89FZ4_BRAJA/32-256:0.20991):0.21697,Q89HT8_BRAJA/51-272:0.27588):0.11935):0.12881,((Q98IJ6_RHILO/11-238:0.52081,(Q98G71_RHILO/26-252:0.47312,((Q89HP3_BRAJA/336-569:0.39606,Q98IJ9_RHILO/30-261:0.47115):0.17992,Q89IK1_BRAJA/30-253:0.53551):0.09062):0.07624):0.08478,(Q6AKF4_DESPS/28-248:0.62973,Q89MV1_BRAJA/176-400:0.45319):0.11842):0.11206):0.08502):0.03853):0.09445):0.30808,(Q19719_CAEEL/252-476:0.77439,(Q8BFT0_MOUSE/340-577:0.18803,Q9DDL2_BRARE/323-560:0.19032):0.53393):0.64263):0.06238):0.69904,(Q7QGM9_ANOGA/4-212:0.78893,(Q9NBW3_DROME/38-248:0.53881,Q9V9J6_DROME/313-523:0.44982):0.21420):0.31164):0.23484,(Q9GV89_HYDAT/93-318:0.86350,Q8I749_SUBDO/254-491:0.82256):0.09919):0.12987,(((CASPE_MOUSE/22-256:0.19667,CASPE_HUMAN/18-241:0.08372):0.59215,((Q9DDJ2_BRARE/174-400:0.50863,Q9I9L7_BRARE/145-379:0.35391):0.23260,((O42284_CHICK/42-279:0.36697,(((CASPC_MOUSE/176-415:0.33175,(CASP1_FELCA/161-406:0.09693,((CASPD_BOVIN/136-373:0.10521,CASP5_HUMAN/177-414:0.17570):0.03454,CASP1_CANFA/163-400:0.09083):0.02756):0.07306):0.04333,CASP4_MOUSE/132-369:0.30099):0.11065,(CASP1_MOUSE/162-398:0.16218,(CASP1_HUMAN/163-400:0.15260,CASP1_PIG/163-400:0.11443):0.04968):0.10598):0.16467):0.15468,CAS1A_XENLA/144-382:0.30504):0.18485):0.35356):0.17667,(O55194_RAT/200-445:0.71792,((O18203_CAEEL/293-532:0.53006,Q9TZP5_CAEEL/26-261:0.48948):0.25828,(CED3_CAEEL/243-494:0.33935,Q9Y1U6_PRIPA/173-413:0.45101):0.14697):0.10937):0.07091):0.07220):0.08433,ICENC_DROME/196-443:1.02307):0.04343,((((Q8ITP3_BRAFL/87-323:0.31122,(Q8ITP2_BRAFL/151-396:0.33475,(((CASP6_MOUSE/28-270:0.14607,O93415_CHICK/57-299:0.14688):0.03887,Q9I8S9_ONCMY/57-297:0.20357):0.07140,Q9IB66_XENLA/58-298:0.19387):0.25667):0.28776):0.08984,((O88550_RAT/68-301:0.18114,Q6DCI2_XENLA/78-314:0.18429):0.13733,(Q9GV88_HYDAT/84-316:0.71466,((Q8JG42_FUGRU/51-279:0.13158,Q98UI8_BRARE/48-280:0.13209):0.10792,(Q8JIS8_ORYLA/58-285:0.32288,(O93417_CHICK/53-281:0.19693,CASP3_XENLA/56-280:0.29582):0.07662):0.03408):0.12512):0.00688):0.11833):0.08444,(((((Q7PZJ9_ANOGA/20-250:0.17059,Q7QKT2_ANOGA/35-260:0.28321):0.44982,Q9NHF9_DROME/56-302:0.42225):0.12793,(Q7PV92_ANOGA/18-255:0.22951,Q86FL0_ANOST/52-286:0.24635):0.10494):0.12421,Q7Q803_ANOGA/54-306:0.27339):0.23948,(Q7Q1E0_ANOGA/53-282:0.42886,((CASP1_SPOFR/61-293:0.25824,(ICE_DROME/94-328:0.14294,CASP1_DROME/79-313:0.24091):0.02066):0.06943,Q7Q4X6_ANOGA/73-309:0.20081):0.13691):0.22785):0.17097):0.11310,(((CASP9_HUMAN/161-413:0.24058,Q90WU0_CHICK/148-400:0.17214):0.08301,Q9IB63_XENLA/144-396:0.24242):0.49971,Q8I6Y2_GEOCY/158-414:0.48720):0.06980):0.06400):0.17061,(Q6E5N8_ICTPU/119-362:0.53795,((Q6PAD9_XENLA/268-495:0.40319,Q9I8J3_BRARE/238-473:0.48806):0.10087,((CASP8_MOUSE/236-478:0.18916,CASP8_HUMAN/234-476:0.11012):0.13268,Q90WU1_CHICK/237-479:0.22034):0.15861):0.07568):0.10614):0.13549,Q9IB64_XENLA/261-494:0.49581):1.06930,Q6NTR7_XENLA/280-494:0.54551):0.33660,CFLAR_MOUSE/257-481:0.28177):0.05964,CFLAR_HUMAN/252-477:0.17251,Q6QN97_PIG/259-484:0.14864);