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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00648 alignment
(9 sequences with 371 aa)


CANX_CHICK/48-347 LFRDPQFPAGPTALGFKELGPYSSKTRGVEWKRPSELVDDPQFIVGGAT------RT----DICQGALGDCWLLAAIGSLTLNEELLHRVVPHGQSFQED-YAGIFHFQIWQFGEWVDVVVDDLLPT-KDGE--LLFVHSAECTEFWSALLEKAYAKLNGCYESLSGGSTTEGFEDFTGGVAEMYDLKRAPR-----------------------------------NMGH--IIRKALERGS-------------LLGCSIDITSA.FDMEAVTFKKLVKGHAYSVTAFKDVNY----RGQQEQLIRIRNPWG-QVEWTGAWSDGSSEWDNIDPSDREELQLKME-DGEFWMSFRDFMREFSRLEICNLT
CAN1_HUMAN/55-354 LFRDEAFPPVPQSLGYKDLGPNSSKTYGIKWKRPTELLSNPQFIVDGAT------RT----DICQGALGDCWLLAAIASLTLNDTLLHRVVPHGQSFQNG-YAGIFHFQLWQFGEWVDVVVDDLLPI-KDGK--LVFVHSAEGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPS-----------------------------------DLYQ--IILKALERGS-------------LLGCSIDISSV.LDMEAITFKKLVKGHAYSVTGAKQVNY----RGQVVSLIRMRNPWG-EVEWTGAWSDSSSEWNNVDPYERDQLRVKME-DGEFWMSFRDFMREFTRLEICNLT
CAN2_RAT/44-343 LFQDPSFPALPSSLGFKELGPYSSKTRGIEWKRPTEICADPQFIIGGAT------RT----DICQGALGDCWLLAAIASLTLNEEILARVVPLDQSFQEN-YAGIFHFQFWQYGEWVEVVVDDRLPT-KDGE--LLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELRKPPP-----------------------------------NLFK--IIQKALEKGS-------------LLGCSIDITSA.ADSEAVTYQKLVKGHAYSVTGAEEVES----SGSLQKLIRIRNPWG-QVEWTGKWNDNCPSWNTVDPEVRANLTERQE-DGEFWMSFSDFLRHYSRLEICNLT
CAN2_HUMAN/44-343 LFQDPSFPAIPSALGFKELGPYSSKTRGIEWKRPTEICADPQFIIGGAT------RT----DICQGALGDCWLLAAIASLTLNEEILARVVPLNQSFQEN-YAGIFHFQFWQYGEWVEVVVDDRLPT-KDGE--LLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELKKPPP-----------------------------------NLFK--IIQKALQKGS-------------LLGCSIDITSA.ADSEAITFQKLVKGHAYSVTGAEEVES----NGSLQKLIRIRNPWG-EVEWTGRWNDNCPSWNTIDPEERERLTRRHE-DGEFWMSFSDFLRHYSRLEICNLT
CAN3_RAT/74-417 LYLDPEFPPDETSLFYSQKFP-----IQFVWKRPPEICENPRFIIGGAN------RT----DICQGDLGDCWLLAAIACLTLNERLLFRVIPHDQSFTEN-YAGIFHFQFWRYGDWVDVVIDDCLPT-YNNQ--LVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFEIKDAPSDMYKIMRKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGE--LIARMVRNMDNSLLRDSDLDPRASDDRPSRTIVP.VQYETRMACGLVKGHAYSVTGLEEALF----KGEKVKLVRLRNPWG-QVEWNGSWSDGWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFVYHFTKLEICNLT
CAN3_HUMAN/74-417 LYVDPEFPPDETSLFYSQKFP-----IQFVWKRPPEICENPRFIIDGAN------RT----DICQGELGDCWFLAAIACLTLNQHLLFRVIPHDQSFIEN-YAGIFHFQFWRYGEWVDVVIDDCLPT-YNNQ--LVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVAEFFEIRDAPSDMYKIMKKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGE--LIARMVRNMDNSLLQDSDLDPRGSDERPTRTIIP.VQYETRMACGLVRGHAYSVTGLDEVPF----KGEKVKLVRLRNPWG-QVEWNGSWSDRWKDWSFVDKDEKARLQHQVTEDGEFWMSYEDFIYHFTKLEICNLT
CAN_DROME/88-387 LFEDPLFPASNESLQFSRRPD-----RHIEWLRPHEIAENPQFFVEGYS------RF----DVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEEN-YAGIFHFRFWQYGKWVDVIIDDRLPT-YNGE--LMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAPG-----------------------------------NLFT--ILQKAAERNS--------------MMGCSIEPDP.NVTEAETPQGLIRGHAYSITKVCLIDIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLS
CAN_SCHMA/99-397 LWEDPDFPANDKAIGNLPDFR-----ERIEWKRPHEINPNAKFFAGGAS------RF----DIEQGALGDCWLLAVVASISGYPQLFDQVVPKDQELKGPEYVGVVRFRFWRFGHWVEVLIDDRLPV-RQGRNTLVFMHSNDPTEFWSALLEKAYAKLNGCYAHLSGGSQSEAMEDLTGGICLSLELNQKER---------------------------------PSDLID--QLKIYAQRCC-------------LMGCSIDSS--.-VMEQKMDNGLIGSHAYSLTGVYPVNY----RGRTQWLMRLRNPWGDSHEWKGAWCDGSPQWREISEQEKKNINLSFTADGEFWMSYEDFVTCFSRVEVCHLG
SOL_DROME/1014-1321 LFVDDSFPPAPKSLYYNPASGAGEGNPVVQWRRPHEINCD-----GGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVL-VTKEICGQ---GAYQVRLCKDGKWTTVLVDDLLPCDKRGH--LVYSQ-AKRKQLWVPLIEKAVAKIHGCYEALVSGRAIEGLATLTGAPCESIPL-QASS----------------------------LPMPSEDELDKDLIWAQLLSSRC----------VRFLMGASCGGGNMkVDEEEYQQKGLRPRHAYSVLDVKDIQG--------HRLLKLRNPWG-HYSWRGDWSDDSSLWT---DDLRDALMPHGASEGVFWISFEDVLNYFDCIDICKVR