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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00648 - Peptidase_C2)
Calpain family cysteine protease
(Pfam reference: accession no. PF00648)
(Interpro reference: accession no. IPR001300)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
9 sequences @ 371 aa
(ave. pairwise identity: 0.56)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.13)
nucleotides
(available for above)
9 sequences @ 1113 bp
(ave. pairwise identity: 0.58)
New Hampshire format
(total tree length: 2.71)
amino acids, restricted set
(corresp. to available nt seqs)
9 sequences @ 371 aa
(ave. pairwise identity: 0.56)
New Hampshire format
(total tree length: 3.13)