EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00645 alignment
(14 sequences with 282 bp)


PARP1_HUMAN/112-202 TTTGCAGCAGAGTATGCCAAGTCCAACAGAAGTACGTGCAAGGGGTGTATGGAGAAGATAGAAAAGGGCCAGGTGCGCCTGTCCAAGAAGATGGTGGACCCGGAGAAG---CCACAGCTAGGCATGATTGACCGCTGGTACCATCCAGGCTGCTTTGTCAAGAAC------AGGGAGGAGCTGGGTTTCCGGCCCGAGTACAGTGCGAGTCAGCTCAAGGGCTTCAGCCTCCTTGCTACAGAGGATAAAGAAGCCCTGAAGAAGCAGCTCCCAGGAGTCAAG
PARP1_MOUSE/112-202 TTTGCAGCAGAGTATGCCAAGTCCAACAGGAGCATGTGCAAGGGCTGCCTGGAGAAGATAGAGAAGGGCCAGATGCGCCTGTCCAAGAAGATGGTGGATCCAGAGAAG---CCACAGCTGGGTATGATTGACCGCTGGTACCATCCAACTTGCTTTGTCAAGAAG------CGGGACGAGCTGGGCTTCCGGCCCGAGTACAGTGCCAGTCAGCTCAAGGGCTTTAGCCTCCTCTCTGCAGAAGACAAAGAAGCTCTGAAGAAGCAGCTCCCGGCCATCAAG
PARP1_CHICK/113-203 TTTGCTGCAGAGTATGCCAAGTCTAACAGGAGTACTTGCAAAGGCTGTGAGCAGAAAATAGAAAAGGGCCAGATTCGGATTTCCAAGAAGATGGTGCATCCTGAGAAA---CCACAGCTGGGGATGATCGATAACTGGTACCACCCGGACTGCTTCGTGAGCCGC------CGGGCAGAGCTGGGCTTCCTCCCAGCATATGGGGCCACACAGCTCCTGGGTTTCAGCATCTTGAAAGCTGAAGATAAAGAAACTCTGAAGAAACAGCTACCAGCTACTAAG
PARP1_BOVIN/115-205 TTCGGGGCAGGGTACGCCAAGTCCAACAGAAGCACGTGCAAGAGCTGCATGGAGAAGATAGACAAGGGCCAGGTGCGCCTGTCTAAGAAGGTGGTGTACCCCGATAAG---CCCCAGCTGGGCATGGTTGACTGCTGGTACCACCCAAAGTGTTTTGTTCAGAAA------CGGGAGGAGCTGGGCTTCCGTCCCGAGTTCAGCGCAACGCACCTCATGGGCTTCAGCGTCCTCACCGCAGAGGACCAAGAAACCCTCAAGAAGCAACTCCCGGCCATCAAG
PARP_SARPE/114-203 TTTGGTATAGAATATGCAAAGTCCGGTCGAGCGTCATGCCGAGGATGCGAGCAAAAGATATTAAAGGATCAAATAAGAATACGAAAGACTGTTTTTGACACAGAAGTTGGAATGAAATATGGTGGTCAACCGTTGTGGCATCACGTTGAATGTTTCGCACAATTG------CGCGGTGAATTGGGTTGGCTTGATACCGGA------GAAAATTTACCTGGATTTCAGACATTGAAAAGTGATGACAAAGCAGATGTTAAAAAAGCGCTTCCGGTAATTAAG
PARP_DROME/111-200 TTTGGGATTGAATATGCAAAATCTAGTCGATCGACGTGTCGTGGATGTGAACAAAAAATAAACAAGGATCTAGTTCGCTTACGTAAAACTGTTTATGATACTGAAGTTGGTATGAAGTACGGAGGCCAACCTTTGTGGCATCATTTGGAATGCTTCGCCCAATTG------CGCTCTGAGCTTGGCTGGTTTGCGTCAGGT------GAAGATATGCCAGGATTTCAGAGCTTAGCAGATGATGATCAAGCGAAAGTTAAAAACGCCATACCACCAATAAAA
PARP1_HUMAN/8-92 TATCGAGTCGAGTACGCCAAGAGCGGGCGCGCCTCTTGCAAGAAATGCAGCGAGAGCATCCCCAAGGACTCGCTCCGGATGGCCATCATGGTGCAGTCGCCCATGTTT---------GATGGAAAAGTCCCACACTGGTACCACTTCTCCTGCTTCTGGAAG---------GTGGGCCACTCCATCCGGCACCCTGACGTT---------GAGGTGGATGGGTTCTCTGAGCTTCGGTGGGATGACCAGCAGAAAGTCAAGAAGACAGCGGAAGCTGGAGGA
PARP1_MOUSE/8-92 TATCGAGTGCAGTACGCGAAGAGCGGGCGCGCCTCTTGCAAGAAATGCAGCGAGAGTATTCCCAAGGACTCCCTCCGCATGGCCATCATGGTGCAGTCACCCATGTTC---------GATGGGAAAGTCCCACACTGGTACCACTTCTCCTGCTTCTGGAAG---------GTGGGCCAGTCCATCCGGCACCCTGATGTT---------GAGGTGGATGGCTTCTCTGAGCTGCGCTGGGATGATCAGCAGAAGGTCAAGAAGACGGCCGAGGCTGGAGGC
PARP1_BOVIN/8-92 TACCGGGTCGAGTACGCCAAGAGCGGGCGCGCGTCTTGCAAGAAATGCAAAGAGAGCATCCCCAAGGACTCGATCCGGATGGCCTTCATGGTGGAGTCGCCCATGTTC---------GATGGGAAAATCCCGCACTGGTACCACCTCTCCTGCTTCTGGAAG---------GTCGGCTTCTCCATCTGGCACCCTGATGTC---------GAGGTGGAGGGGTTCTCTGAGCTCCGCTGGGATGACCAGCAGACGATCAAGAAGATGGCCGAGACTGGCGGA
PARP1_XENLA/1-78 ---------------GCTAAGAGCGGTCGCGCCTCTTGCAAGAAATGCGGCGACAACATCGCCAAGGAGTCTCTCGGTCTCGCCATCATGGTGCAGTCCCCAATGTTC---------GATGGCAAAGTTCCGCACTGGCATCACTACTCGTGTTTCTGGAAG---------CGTGCCCGAGTCTTATCCCAAGGG---------------GATATTTATGGTTACACAGAGCTCCGATGGGAAGATCAGGAAATGATTAAGAAAGCCATTGAAACTGGAGGG
PARP1_CHICK/9-91 TACCGCGCGGAGTACGCCAAGAGCGGGCGGGCGTCGTGCAAGAAGTGTGGCGAGAGCATCGCCAAGGACTCGCTGCGCCTGGCCCTCATGGTGCAGTCGCCCATGTTC---------GATGGCAAAGTCCCTCACTGGCACCACTACAGCTGCTTCTGGAAG---------CGGGCGCGGATCGTGTCCCACACA---------------GACATCGATGGCTTCCCTGAGCTCCGCTGGGAGGACCAGGAGAAAATCAAGAAGGCCATTGAAACCGGAGCC
PARP_SARPE/7-89 TTTAAAGTAGAATACTCGAAATCTTCAAGAGCATCATGTAAGGGCTGTAAAAATAAAATTGAAGCAGGAATCCTACGTATTGCGGCTATGGTGCAGTCAGCTTTTCAT---------GATGGAAAGCAACCAAACTGGTTCCATGAACAATGTTTTTTTCAA---------AAGCAACGTCCTACTTCTGCTGGA---------------GATATTGAAAATTTTGAAAATATTCGTTTTGAAGATCAAGAAAGAATTAAGAAAGCAATTGATAACTGCACA
PARP_DROME/7-89 TATCTTGCTGAGTATGCAAGAACTGGACGAGCCACTTGCAAAGGATGTAAAAGTACTATATCTAAAGATACTCTTCGGATTGCTGTCATGGTTCAATCTGCATTTCAT---------GATGCCAAAGTTCCGAATTGGTTTCATAAAACCTGCTTTTTTAAA---------AACCAGCGTCCCAGCTCAGTAGGA---------------GACATACAAAACATTGGAAATCTCCGATTTGCCGATCAAAAGGAATTAACGGATCTTGTGGAAAATATACAA
DNL3_HUMAN/6-98 TTCTGTGTGGACTATGCCAAGCGTGGCACAGCTGGCTGCAAAAAATGCAAGGAAAAGATTGTGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCA---GAGTCTGGGGGTGATATGAAAGAGTGGTACCACATTAAATGCATGTTTGAGAAACTAGAGCGGGCCCGGGCCACCACAAAAAAAATCGAGGACCTCACAGAGCTGGAAGGCTGGGAAGAGCTGGAAGATAATGAGAAGGAACAGATAACCCAGCACATTGCAGATCTGTCT