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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00635 phylogeny
for nucleotide alignment


 
((((((Q22660_CAEEL/13-119,(((((Q9U3P3_CAEEL/27-125,((YS13_CAEEL/4-103,Q18451_CAEEL/4-103),(((Q9XXL3_CAEEL/1-100,O45433_CAEEL/1-100),Q8ISB9_ASCSU/2-101),(O01829_CAEEL/2-101,Q8ISC1_ASCSU/53-152)))),(Q21500_CAEEL/34-129,YLM2_CAEEL/76-175)),((O17595_CAEEL/180-275,(Q9XVN1_CAEEL/236-335,Q95ZT8_CAEEL/155-254)),(Q8ISB7_ASCSU/127-226,Q8ISB8_ASCSU/124-223))),((O17992_CAEEL/22-122,Q9XUT1_CAEEL/168-268),O61765_CAEEL/192-293)),P91035_CAEEL/40-151)),(Q22622_CAEEL/302-403,O44550_CAEEL/6-111)),((SCS2_YEAST/3-110,((Q8C0G1_MOUSE/327-432,(((((VAPA_RAT/7-111,Q9D8A4_MOUSE/14-118),VAPB_HUMAN/7-111),VP33_APLCA/7-112),((O01630_CAEEL/7-112,O44782_CAEEL/7-112),O17099_CAEEL/7-110)),(Q9W4N8_DROME/9-115,Q9VSD3_DROME/8-112))),((((O65410_ARATH/107-218,Q8LAZ8_ARATH/99-212),P93040_ARATH/76-189),Q8IL71_PLAF7/3-106),(((Q8LN94_ORYSA/7-114,((O82213_ARATH/6-113,Q8LDM1_ARATH/6-113),(Q9SYC9_ARATH/176-283,Q9SYC9_ARATH/6-113))),(Q8LBD9_ARATH/6-114,(Q9LVU1_ARATH/9-116,Q949F3_ORYSA/7-114))),Q9FRQ7_ARATH/5-112)))),((((O75423_HUMAN/19-125,Q9UJG1_HUMAN/16-122),Q8SQX9_ENCCU/3-105),P91330_CAEEL/18-122),(Q8I0D5_DROME/35-139,Q9VT97_DROME/7-111)))),(Q20981_CAEEL/9-110,Q95XR9_CAEEL/9-110)),(Q18503_CAEEL/298-407,(Q9XW54_CAEEL/37-150,(Q9U2W1_CAEEL/51-156,(Q9GNW8_9BILA/2-107,(MSP10_CAEEL/8-113,MSP1_GLORO/7-112)))))),O76615_CAEEL/264-369,Q9U2A7_CAEEL/305-413);
((((((Q22660_CAEEL/13-119:0.68265,(((((Q9U3P3_CAEEL/27-125:0.61119,((YS13_CAEEL/4-103:0.16347,Q18451_CAEEL/4-103:0.34828):0.34619,(((Q9XXL3_CAEEL/1-100:0.18467,O45433_CAEEL/1-100:0.23959):0.08576,Q8ISB9_ASCSU/2-101:0.45102):0.09994,(O01829_CAEEL/2-101:0.34793,Q8ISC1_ASCSU/53-152:0.22766):0.07575):0.06512):0.07991):0.04513,(Q21500_CAEEL/34-129:0.43034,YLM2_CAEEL/76-175:0.52279):0.09084):0.13231,((O17595_CAEEL/180-275:0.49515,(Q9XVN1_CAEEL/236-335:0.29867,Q95ZT8_CAEEL/155-254:0.49635):0.10630):0.06933,(Q8ISB7_ASCSU/127-226:0.35087,Q8ISB8_ASCSU/124-223:0.25339):0.19060):0.14872):0.02727,((O17992_CAEEL/22-122:0.27500,Q9XUT1_CAEEL/168-268:0.25466):0.33032,O61765_CAEEL/192-293:0.24593):0.18482):0.14136,P91035_CAEEL/40-151:0.64843):0.09917):0.02982,(Q22622_CAEEL/302-403:0.78657,O44550_CAEEL/6-111:0.57868):0.31236):0.18100,((SCS2_YEAST/3-110:0.51937,((Q8C0G1_MOUSE/327-432:0.73584,(((((VAPA_RAT/7-111:0.08400,Q9D8A4_MOUSE/14-118:0.23433):0.10990,VAPB_HUMAN/7-111:0.13598):0.16085,VP33_APLCA/7-112:0.24281):0.10202,((O01630_CAEEL/7-112:0.56238,O44782_CAEEL/7-112:0.13186):0.07588,O17099_CAEEL/7-110:0.13980):0.26740):0.08658,(Q9W4N8_DROME/9-115:0.26806,Q9VSD3_DROME/8-112:0.49364):0.20937):0.03314):0.13799,((((O65410_ARATH/107-218:0.12614,Q8LAZ8_ARATH/99-212:0.09669):0.09426,P93040_ARATH/76-189:0.25330):0.36301,Q8IL71_PLAF7/3-106:0.58772):0.16745,(((Q8LN94_ORYSA/7-114:0.32347,((O82213_ARATH/6-113:0.13615,Q8LDM1_ARATH/6-113:0.03199):0.08323,(Q9SYC9_ARATH/176-283:0.02858,Q9SYC9_ARATH/6-113:0.06006):0.12395):0.11035):0.04646,(Q8LBD9_ARATH/6-114:0.18454,(Q9LVU1_ARATH/9-116:0.17845,Q949F3_ORYSA/7-114:0.23316):0.19764):0.05437):0.11777,Q9FRQ7_ARATH/5-112:0.29405):0.20827):0.13483):0.05995):0.05595,((((O75423_HUMAN/19-125:0.40818,Q9UJG1_HUMAN/16-122:0.34460):0.67816,Q8SQX9_ENCCU/3-105:0.78587):0.24763,P91330_CAEEL/18-122:0.75076):0.11897,(Q8I0D5_DROME/35-139:0.24352,Q9VT97_DROME/7-111:0.71825):0.34213):0.14540):0.17869):0.06107,(Q20981_CAEEL/9-110:0.39200,Q95XR9_CAEEL/9-110:0.50353):0.30678):0.21627,(Q18503_CAEEL/298-407:0.54465,(Q9XW54_CAEEL/37-150:0.94869,(Q9U2W1_CAEEL/51-156:0.35038,(Q9GNW8_9BILA/2-107:0.18719,(MSP10_CAEEL/8-113:0.07906,MSP1_GLORO/7-112:0.46772):0.09701):0.12720):0.06458):0.12134):0.10511):0.59818,O76615_CAEEL/264-369:0.18531,Q9U2A7_CAEEL/305-413:0.23647);