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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00632 phylogeny
for nucleotide alignment


 
((((((((((((Q8IYU2_HUMAN/602-909,Q8IB94_PLAF7/8285-8591),UPL2_ARATH/3346-3658),(((PTR1_SCHPO/2921-3227,TOM1_YEAST/2962-3268),TOM1_NEUCR/3759-4065),(UREB1_HUMAN/3053-3360,Q9GUP2_CAEEL/3870-4177))),Q8SR14_ENCCU/2104-2410),(((((ITCH_HUMAN/598-903,WWP2_HUMAN/565-870),(Q95XU3_CAEEL/487-792,Q9Y0H4_DROME/644-949)),((Q9VVI3_DROME/701-1006,O42573_XENLA/665-970),Q9BKW4_CAEEL/441-723)),((Q7PSQ3_ANOGA/730-1039,Q8K300_MOUSE/423-728),(Q09547_CAEEL/571-889,((Q7QE66_ANOGA/128-437,Q9W325_DROME/130-437),Q8K4P8_MOUSE/1278-1583)))),((Q7RV01_NEUCR/502-806,(((PUB3_SCHPO/482-786,PUB1_SCHPO/463-767),PUB2_SCHPO/367-671),RSP5_YEAST/505-809)),Q9SU29_ARATH/560-873))),(O15033_HUMAN/515-826,Q9VQ67_DROME/657-971)),((((O17858_CAEEL/2646-2944,(EDD_HUMAN/2486-2799,Q7PY73_ANOGA/920-1227)),Q7QZQ9_GIALA/875-1158),(Q8SS57_ENCCU/454-746,((Q7QUF0_GIALA/647-961,((UBE3A_MOUSE/587-885,Q9XZN5_MYAAR/576-876),Q9VTH1_DROME/673-973)),((((HUL4_YEAST/570-892,O94275_SCHPO/482-807),(Q7YYE6_CRYPV/485-785,Q8CDU6_MOUSE/464-774)),Q873C0_NEUCR/1005-1322),((Q9BL11_CAEEL/717-1019,(Q8CFQ0_MOUSE/752-1050,Q8IXP9_HUMAN/751-1049)),(Q7PT00_ANOGA/682-980,Q9W0H2_DROME/761-1058)))))),(((Q7R629_GIALA/2319-2632,Q7QUT2_GIALA/426-723),((Q8JFV5_BRARE/2145-2576,Q9VL06_DROME/2313-2727),((Q8K051_MOUSE/747-1102,(Q7PUQ4_ANOGA/1332-1696,Q9VN58_DROME/1878-2228)),((Q7S5Y8_NEUCR/1585-1932,(UFD4_YEAST/1148-1482,Q8IC24_PLAF7/3588-3888)),(Q9LYZ7_ARATH/1160-1501,Q9SZN9_ARATH/390-757))))),((Q9Y4D8_HUMAN/2681-3004,Q9N9M2_LEIMA/5123-5428),Q8IW65_HUMAN/323-635)))),(Q7Q342_ANOGA/783-1086,Q9W196_DROME/819-1122)),O15979_CAEEL/326-655),(Q9AUK0_ORYSA/437-751,Q9SCQ2_ARATH/828-1142)),HUL5_YEAST/607-910),Q8IIH3_PLAF7/1839-2147,Q7RCE4_PLAYO/2-312);
((((((((((((Q8IYU2_HUMAN/602-909:0.34385,Q8IB94_PLAF7/8285-8591:0.40903):0.10818,UPL2_ARATH/3346-3658:0.29682):0.10688,(((PTR1_SCHPO/2921-3227:0.21711,TOM1_YEAST/2962-3268:0.29650):0.11414,TOM1_NEUCR/3759-4065:0.22057):0.09028,(UREB1_HUMAN/3053-3360:0.23044,Q9GUP2_CAEEL/3870-4177:0.24899):0.14784):0.05173):0.08293,Q8SR14_ENCCU/2104-2410:0.46460):0.05719,(((((ITCH_HUMAN/598-903:0.24363,WWP2_HUMAN/565-870:0.12940):0.04605,(Q95XU3_CAEEL/487-792:0.24775,Q9Y0H4_DROME/644-949:0.15403):0.05549):0.16621,((Q9VVI3_DROME/701-1006:0.19759,O42573_XENLA/665-970:0.26998):0.07720,Q9BKW4_CAEEL/441-723:0.26733):0.10367):0.03814,((Q7PSQ3_ANOGA/730-1039:0.24869,Q8K300_MOUSE/423-728:0.21223):0.14287,(Q09547_CAEEL/571-889:0.62633,((Q7QE66_ANOGA/128-437:0.18645,Q9W325_DROME/130-437:0.17947):0.08073,Q8K4P8_MOUSE/1278-1583:0.26113):0.11268):0.08769):0.04362):0.04744,((Q7RV01_NEUCR/502-806:0.15383,(((PUB3_SCHPO/482-786:0.22680,PUB1_SCHPO/463-767:0.13996):0.05428,PUB2_SCHPO/367-671:0.39813):0.05608,RSP5_YEAST/505-809:0.23068):0.11192):0.12361,Q9SU29_ARATH/560-873:0.77750):0.05827):0.07772):0.07116,(O15033_HUMAN/515-826:0.28808,Q9VQ67_DROME/657-971:0.24316):0.32090):0.07028,((((O17858_CAEEL/2646-2944:0.47294,(EDD_HUMAN/2486-2799:0.38279,Q7PY73_ANOGA/920-1227:0.26378):0.09424):0.32210,Q7QZQ9_GIALA/875-1158:0.71788):0.13122,(Q8SS57_ENCCU/454-746:0.57844,((Q7QUF0_GIALA/647-961:0.60881,((UBE3A_MOUSE/587-885:0.26605,Q9XZN5_MYAAR/576-876:0.23668):0.09918,Q9VTH1_DROME/673-973:0.31173):0.06960):0.04835,((((HUL4_YEAST/570-892:0.53267,O94275_SCHPO/482-807:0.46056):0.12747,(Q7YYE6_CRYPV/485-785:0.46832,Q8CDU6_MOUSE/464-774:0.32151):0.06316):0.09995,Q873C0_NEUCR/1005-1322:0.54389):0.06639,((Q9BL11_CAEEL/717-1019:0.51254,(Q8CFQ0_MOUSE/752-1050:0.25961,Q8IXP9_HUMAN/751-1049:0.24022):0.11047):0.07185,(Q7PT00_ANOGA/682-980:0.22705,Q9W0H2_DROME/761-1058:0.19840):0.14049):0.17484):0.04619):0.08093):0.10105):0.04414,(((Q7R629_GIALA/2319-2632:0.69717,Q7QUT2_GIALA/426-723:0.91555):0.29925,((Q8JFV5_BRARE/2145-2576:0.26225,Q9VL06_DROME/2313-2727:0.33680):0.25425,((Q8K051_MOUSE/747-1102:0.27947,(Q7PUQ4_ANOGA/1332-1696:0.17295,Q9VN58_DROME/1878-2228:0.27303):0.20201):0.17449,((Q7S5Y8_NEUCR/1585-1932:0.36870,(UFD4_YEAST/1148-1482:0.33275,Q8IC24_PLAF7/3588-3888:0.61246):0.18756):0.15036,(Q9LYZ7_ARATH/1160-1501:0.31001,Q9SZN9_ARATH/390-757:0.32293):0.18065):0.07517):0.06193):0.15555):0.08520,((Q9Y4D8_HUMAN/2681-3004:0.45445,Q9N9M2_LEIMA/5123-5428:0.66824):0.14803,Q8IW65_HUMAN/323-635:0.44058):0.19288):0.08203):0.04699):0.17188,(Q7Q342_ANOGA/783-1086:0.18746,Q9W196_DROME/819-1122:0.22147):0.22954):0.14738,O15979_CAEEL/326-655:0.48221):0.07334,(Q9AUK0_ORYSA/437-751:0.16725,Q9SCQ2_ARATH/828-1142:0.18984):0.22587):0.17685,HUL5_YEAST/607-910:0.37123):0.44525,Q8IIH3_PLAF7/1839-2147:0.24477,Q7RCE4_PLAYO/2-312:0.22058);