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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00626 phylogeny
for nucleotide alignment


 
(((((((((((VILI_DICDI/202-279,SEVE_DICDI/170-246),FLIH_CAEEL/639-714),(((((O23275_ARATH/636-725,Q9SIJ7_ARATH/633-722),Q9FG78_ARATH/605-694),(SC23B_HUMAN/631-720,Q9U2Z1_CAEEL/687-776)),((SEC23_YEAST/635-724,Q9C284_NEUCR/634-724),O74873_SCHPO/623-713)),(((((YNB3_SCHPO/755-831,Q9VQ94_DROME/1061-1135),(SC24A_HUMAN/949-1024,SC24B_HUMAN/1139-1214)),((Q9V5D2_DROME/1056-1131,SC24A_ARATH/923-996),((SC24B_ARATH/949-1023,Q23368_CAEEL/856-925),(SC24C_HUMAN/961-1036,SC24D_HUMAN/899-974)))),Q9ZQH3_ARATH/628-697),((SFB3_YEAST/767-845,(YIY8_SCHPO/792-867,(SEC24_YEAST/780-856,SFB2_YEAST/730-806))),Q19371_CAEEL/994-1069)))),(((VILI_DICDI/478-561,((((CAPG_HUMAN/28-107,((GELS_HUMAN/454-536,GELS_XENLA/90-172),(VIL1_HUMAN/406-488,VILI_CHICK/407-489))),(GELS_HUMAN/75-158,(VIL1_HUMAN/25-107,VILI_CHICK/26-108))),FLIH_CAEEL/517-600),SEVE_DICDI/52-134)),VILI_DICDI/63-162),VILI_DICDI/610-682)),SEVE_DICDI/281-357),VILI_DICDI/324-400),VILI_DICDI/712-789),FLIH_CAEEL/1164-1243),GELS_HUMAN/679-757),(((CAPG_HUMAN/263-341,GELS_HUMAN/312-390),(((VIL1_HUMAN/145-220,GELS_HUMAN/196-271),CAPG_HUMAN/146-221),(VIL1_HUMAN/265-342,VILI_CHICK/266-343))),(FLIH_CAEEL/756-832,(VIL1_HUMAN/529-594,GELS_HUMAN/574-652)))),VIL1_HUMAN/629-707,VILI_CHICK/630-708);
(((((((((((VILI_DICDI/202-279:0.45978,SEVE_DICDI/170-246:0.38124):0.08685,FLIH_CAEEL/639-714:0.54304):0.08244,(((((O23275_ARATH/636-725:0.31374,Q9SIJ7_ARATH/633-722:0.20261):0.08790,Q9FG78_ARATH/605-694:0.30777):0.12852,(SC23B_HUMAN/631-720:0.22305,Q9U2Z1_CAEEL/687-776:0.29983):0.11173):0.08252,((SEC23_YEAST/635-724:0.35429,Q9C284_NEUCR/634-724:0.22653):0.08059,O74873_SCHPO/623-713:0.19696):0.05808):0.85868,(((((YNB3_SCHPO/755-831:0.49489,Q9VQ94_DROME/1061-1135:0.54822):0.08068,(SC24A_HUMAN/949-1024:0.24178,SC24B_HUMAN/1139-1214:0.24674):0.39640):0.06971,((Q9V5D2_DROME/1056-1131:0.72102,SC24A_ARATH/923-996:0.57757):0.25814,((SC24B_ARATH/949-1023:0.27907,Q23368_CAEEL/856-925:0.66219):0.27152,(SC24C_HUMAN/961-1036:0.23369,SC24D_HUMAN/899-974:0.41130):0.12774):0.07961):0.05358):0.08643,Q9ZQH3_ARATH/628-697:1.41915):0.08147,((SFB3_YEAST/767-845:0.78256,(YIY8_SCHPO/792-867:0.45863,(SEC24_YEAST/780-856:0.27881,SFB2_YEAST/730-806:0.22048):0.13584):0.15972):0.10195,Q19371_CAEEL/994-1069:0.46462):0.06424):0.34743):0.22345):0.18384,(((VILI_DICDI/478-561:0.50216,((((CAPG_HUMAN/28-107:0.33819,((GELS_HUMAN/454-536:0.15290,GELS_XENLA/90-172:0.26739):0.10189,(VIL1_HUMAN/406-488:0.21104,VILI_CHICK/407-489:0.12787):0.23019):0.14072):0.08748,(GELS_HUMAN/75-158:0.18873,(VIL1_HUMAN/25-107:0.16957,VILI_CHICK/26-108:0.16722):0.08584):0.09190):0.34324,FLIH_CAEEL/517-600:0.57187):0.20885,SEVE_DICDI/52-134:0.26219):0.14843):0.20691,VILI_DICDI/63-162:0.42906):0.22079,VILI_DICDI/610-682:0.60807):0.09005):0.07437,SEVE_DICDI/281-357:0.43026):0.11880,VILI_DICDI/324-400:0.61195):0.14998,VILI_DICDI/712-789:0.29285):0.08754,FLIH_CAEEL/1164-1243:0.57762):0.29123,GELS_HUMAN/679-757:0.24752):0.12183,(((CAPG_HUMAN/263-341:0.24666,GELS_HUMAN/312-390:0.25372):0.08899,(((VIL1_HUMAN/145-220:0.44756,GELS_HUMAN/196-271:0.18341):0.18011,CAPG_HUMAN/146-221:0.15585):0.42504,(VIL1_HUMAN/265-342:0.15740,VILI_CHICK/266-343:0.22308):0.09262):0.11698):0.16407,(FLIH_CAEEL/756-832:0.76716,(VIL1_HUMAN/529-594:0.28966,GELS_HUMAN/574-652:0.74505):0.15115):0.17737):0.21413):0.09996,VIL1_HUMAN/629-707:0.12738,VILI_CHICK/630-708:0.16272);