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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00623 phylogeny
for nucleotide alignment


 
((((((((((((Q9AXN0_9EUKA/328-493,(RPB1_TRYBB/350-513,((((O17628_CAEEL/473-653,RPA1_HUMAN/434-614),RPA1_DROME/416-591),(RPA1_YEAST/473-653,Q9QTF4_RSIV/277-427)),(((Q9VXP9_DROME/357-524,RPC1_HUMAN/358-525),(RPC1_SCHPO/352-519,RPC1_YEAST/370-537)),Q9LVH0_ARATH/359-525)))),(RPO1_ASFB7/316-483,((RPB1_SCHPO/348-513,Q9HGZ5_ASPOR/357-522),RPB1_CAEEL/350-511))),O77375_PLAF7/375-540),Q9AVW8_GUITH/327-492),O96446_9MICR/313-476),Q98RN1_GUITH/314-480),(Q9AW39_GUITH/417-601,Q26008_PLAFA/731-907)),Q9AIH0_CARRU/318-460),O21238_RECAM/354-506),(RPOC_CHLTR/347-489,(RPOC_BORBU/333-475,((RPOC_THEAQ/620-765,(RPOC_THEMA/635-779,RPOC_AQUAE/474-616)),RPOC_TREPA/333-475)))),RPOC_MYCPU/418-560),RPOC_MYCGE/407-558,RPOC_UREPA/402-553);
((((((((((((Q9AXN0_9EUKA/328-493:0.27633,(RPB1_TRYBB/350-513:0.38258,((((O17628_CAEEL/473-653:0.39997,RPA1_HUMAN/434-614:0.27302):0.09873,RPA1_DROME/416-591:0.19258):0.10268,(RPA1_YEAST/473-653:0.27678,Q9QTF4_RSIV/277-427:0.59116):0.07978):0.19123,(((Q9VXP9_DROME/357-524:0.20859,RPC1_HUMAN/358-525:0.19229):0.12244,(RPC1_SCHPO/352-519:0.20998,RPC1_YEAST/370-537:0.25822):0.10226):0.04728,Q9LVH0_ARATH/359-525:0.28555):0.06904):0.08029):0.10760):0.04890,(RPO1_ASFB7/316-483:0.72996,((RPB1_SCHPO/348-513:0.18668,Q9HGZ5_ASPOR/357-522:0.19843):0.06813,RPB1_CAEEL/350-511:0.26394):0.03656):0.03716):0.15346,O77375_PLAF7/375-540:0.25506):0.06394,Q9AVW8_GUITH/327-492:0.20759):0.05453,O96446_9MICR/313-476:0.27904):0.14352,Q98RN1_GUITH/314-480:0.32723):0.06939,(Q9AW39_GUITH/417-601:0.49126,Q26008_PLAFA/731-907:0.26615):0.08052):0.34123,Q9AIH0_CARRU/318-460:0.21365):0.09704,O21238_RECAM/354-506:0.28867):0.21524,(RPOC_CHLTR/347-489:0.17370,(RPOC_BORBU/333-475:0.19344,((RPOC_THEAQ/620-765:0.28707,(RPOC_THEMA/635-779:0.25736,RPOC_AQUAE/474-616:0.17395):0.07448):0.14243,RPOC_TREPA/333-475:0.16861):0.08644):0.11706):0.06700):0.12525,RPOC_MYCPU/418-560:0.19904):0.12521,RPOC_MYCGE/407-558:0.21261,RPOC_UREPA/402-553:0.18457);