EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00614 alignment
(46 sequences with 120 bp)


PLDA2_ORYSA/333-372 TACATGATCACCCACCACCAGAAGACCGTCATCGTCGACCACGACatgccagtgccgcgtggcggtggcagccgccgcATCGTCAGCTTCGTCGGGCGGCTCGACCTCTGTGACGGCCGC
PLDA1_RICCO/326-364 ACTATGTTCACTCATCACCAGAAGATTGTGGTGGTGGACAGTGCAatgcctaatggagat...tcgcagaggaggagaATTGTCAGTTTTGTTGGGGGTCTCGACCTCTGTGATGGGAGA
PLDA1_PIMBR/326-364 ACTATCTTCACTCATCACCAGAAGATAGTGGTGGTGGACAGTGAGatgcctacctcagga...tcagagaacagaagaGTTGTGAGTTTTGTTGGTGGCATTGATCTGTGTGATGGGAGA
PLDG1_ARATH/364-399 ACAATCTACACGCATCATCAAAAAACTGTGATTGTAGACGCTGAAgcagctcag............aaccgaagaaagATCGTAGCATTTGTTGGAGGGCTAGATTTGTGCAACGGACGA
YA2G_SCHPO/641-668 CTCTTTTGGGCTCATCATGAGAAGCTTGTGGTAGTGGATGATGCT.................................---ATAACTTTTATTGGTGGTATTGATCTTTGTTTCGGCAGG
SPO14_YEAST/488-515 TATTTTTGGGCACACCACGAGAAGTTTGTCGTTATTGATGAAACA.................................---TTTGCATTTATTGGTGGTACAGATTTATGTTATGGTAGA
PLD2_RAT/437-464 ACACTGTGGGCTCATCACGAGAAGCTCCTGGTGGTAGACCAAGCG.................................---GTGGCATTCTTGGGTGGGCTGGACCTTGCCTATGGCCGC
PLD2_HUMAN/437-464 ACGTTGTGGGCCCATCATGAGAAGCTCCTGGTGGTGGACCAAGTG.................................---GTAGCATTCCTGGGGGGACTGGACCTTGCCTATGGCCGC
YWJE_BACSU/141-168 ATGCAAAAACGGAATCACCGGAAGATTACGGTGATAGACGGAAAA.................................---ATCGGTTATATCGGCGGGTTTAATATCGCCGAAGAATAT
CLS1_BACSU/237-264 CTGAATTTCAGAAATCACCGGAAAATCGTGATCATCGATGGGAAA.................................---ACCGGTTTTGTGGGTGGATTAAATGTCGGGAAGGAATAT
CLS_PSEPU/220-247 GTGAACTTCCGTAACCATCGCAAGATTGTGGTGGTGGATGGC---.................................CTGCTCGGCTTTATCGGCGGCCACAACGTGGGGGACGAATAC
Y988_STRMU/197-224 TACAATTACCGAGACCATCGTAAAATTTTAGTTATTGATAATAAG.................................---GTCGCTTTTAATGGGGGGATTAATCTTGCGGATGAATAT
CLS_ECOLI/219-246 ATGGACCTGCGCCAACATCGCAAGATGATCATGATCGATAAT---.................................TACATCGCGTACACCGGCAGCATGAATATGGTCGATCCTCGC
YJHR_ECOLI/276-303 TTGGTTAATCGTGTTCACAGCAAAATTGTGATTGAGGATGAAGAA.................................---CTGCTGTGTGTCGGATCTTTTAACTGGTTCAGTGCTACA
VK04_VACCC/320-346 TATTCTAGGGTAAACCATGCCAAATATATGGTAACCGATAAAACG.................................------GCCTATATAGGTACCTCAAATTGGACAGGAAATTAC
VK04_VACCV/320-346 TATTCTAGGGTAAACCATGCCAAATATATGGTAACCGATAAAACG.................................------GCGTATATAGGTACCTCAAATTGGACAGGAAATTAC
YWJE_BACSU/311-338 TATCAAGGGTTTTATCATGTAAAAGCCCTCATCATAGACGACCAT.................................---CTCAGCATTATCGGAACAGCCAACTTCGATAAACGGAGC
CLS1_BACSU/413-440 CAAAAAGGCTTCATGCATCAAAAAGTCATGATCATTGATGGCGAT.................................---CTCGCCTCCGTCGGTACCGCGAATATGGACATGCGCAGC
CLS_PSEPU/394-421 CAGCCCGGCTTCCTGCATCAGAAGGTGGTGCTGGTAGATGATGAA.................................---GTAAGCGCAATCGGCAGTGCCAACCTGGACAACCGTTCG
CLS_ECOLI/399-426 GAAGGCGGGTTACTGCATACCAAGAGCGTGCTGGTCGATGGCGAA.................................---CTAAGTCTGGTTGGCACAGTTAACCTTGATATGCGTAGT
VK04_VACCC/110-137 CTAGGAGGAGTTCTTCATACAAAATTTTGGATATCTGATAATACA.................................---CATATTTATTTAGGAAGCGCTAACATGGATTGGAGATCA
VK04_VACCV/110-137 CTAGGAGGAGTTCTTCATACAAAATTTTGGATATCTGATAATACA.................................---CATATTTATTTAGGAAGCGCTAACATGGATTGGAGATCA
YA2G_SCHPO/941-968 GAAATGATCTATGTTCATGCTAAAATTCTTATTGCAGACGATCGA.................................---GTTGCGGTCATTGGTTCCGCAAACATTAATGAACGTTCT
SPO14_YEAST/788-815 GAGCAGCTCTACGTTCATGCTAAAATTCTGATTGCTGATGACAGA.................................---AGATGTATTATAGGGTCTGCTAATATTAACGAAAGATCA
PSS_HAEIN/356-383 GGCGATAATACCTACCACTTAAAAGGTGTGTGGGTAGATGACCGC.................................---TATATTTTACTCACGGGCAATAATCTTAACCCTCGAGCG
PSS_ECOLI/352-379 GACGACAACACCTATCACCTGAAAGGGATGTGGGTTGATGATAAG.................................---TGGATGTTGATCACCGGTAATAACCTGAACCCGCGCGCC
PGS1_YEAST/419-457 AATGGTTGGTCATATCACGCAAAAGGTATTTGGCTTTCCGCTCGTgataaaaatgatgct...aacaattggaaacccTTTATCACGGTTATAGGATCTTCAAACTATACGAGAAGGGCG
PSS_HAEIN/134-160 GTTTTTGGTGTATTGCATGTCAAAGGCTTTGTATTTGATGATACG.................................------GTGCTTTATAGCGGTGCAAGCATTAATAACGTCTAT
PSS_ECOLI/133-159 GCCCTTGGTGTTCTGCACTTTAAAGGCTTTATCATCGACGATAGC.................................------GTACTTTATAGCGGTGCCAGCCTGAACGATGTTTAC
PGS1_YEAST/177-203 GGTTTAGGCTTACAACATATGAAAATATATGGGTTTGATAACGAG.................................------GTCATTCTTTCGGGAGCCAACCTTTCGAACGACTAT
VENV_VACCC/307-334 TTCACTATTCAGAATAATACAAAATTGTTGATAGTCGACGACGAA.................................---TATGTTCATATCACTTCGGCAAATTTCGACGGAACCCAT
VENV_VACCI/307-334 TTCACTATTCAGAATAATACAAAATTGTTGATAGTCGACGACGAA.................................---TATGTTCATATCACTTCGGCAAATTTCGACGGAACCCAT
VENV_VACCP/307-334 TTCACTATTCAGAATAATACAAAATTGTTGATAGTCGACGACGAA.................................---TATGTTCATATCACTTCGGCAAATTTCGACGGAACCCAT
VENV_VACCV/307-334 TTCACTATTCAGAATAATACAAAATTGTTGATAGTCGACGACGAA.................................---TATGTTCATATCACTTCGGCAAATTTCGACGGAACCCAT
VENV_VARV/307-334 TTCACTATTCAGAATAATACAAAATTGTTGATAGTCGACGATGAA.................................---TATGTTCATATCACGTCGGCAAATTTTGACGGAACCCAT
VENV_MCV2/310-337 GGCGACGCCATCAATAACACCAAGCTCCTCGTGGTTGACGACGAG.................................---TACGTGCATGTGAGCAACGCCGACATAGACGGCACGCAC
VENV_MCV1/310-337 GGCGACGCCGTCAATAACACCAAGCTCCTCGTGGTGGACGACGAG.................................---TACGTGCATGTGACCAGCGCCGACATGGACGGCACGCAC
VENV_FOWPV/309-336 GTAGATGATATTAATAATTCTAAAATGATGATTATAGATGGAAGG.................................---TATGCTCATGTTATGACTGCTAACCTAGACGGGTCTCAT
VENV_VACCC/113-140 AATGTGGGACTACTACTCGGTTGTTTTTGGGTGTCAGATGATGAA.................................---AGATGTTATGTAGGAAACGCGTCATTTACTGGAGGATCT
VENV_VACCI/113-140 AATGTGGGACTACTACTCGGTTGTTTTTGGGTGTCAGATGATGAA.................................---AGATGTTATGTAGGAAACGCGTCATTTACTGGAGGATCT
VENV_VACCP/113-140 AATGTGGGACTACTACTCGGTTGTTTTTGGGTGTCAGATGATGAA.................................---AGATGTTATGTAGGAAACGCGTCATTTACCGGAGGATCT
VENV_VACCV/113-140 AATGTGGGACTACTACTCGGTTGTTTTTGGGTGTCAGATGATGAA.................................---AGATGTTATGTAGGAAACGCGTCATTTACTGGAGGATCT
VENV_VARV/113-140 AACGTAGGACTACTACTTGGATGTTTTTGGGTATCAGATGATGAA.................................---AGATGTTATGTAGGAAACGCGTCATTTACTGGAGGATCT
VENV_MCV1/116-143 AAGCCCGGAAGCTTGCTCAGCAGCTTCTGGGTATCGGACAAGCGC.................................---CGCTTTTACCTGGGCAGCGCCTCGCTTACCGGGGGCTCC
VENV_MCV2/116-143 AAGCCCGGAAGCTTGCTCAGCAGCTTCTGGGTGTCGGACAAGCGC.................................---CGCTTTTACCTGGGCAGCGCCTCGCTCACCGGAGGCTCC
VENV_FOWPV/114-141 TCAGTAGGAAACTTGTTAGGTAATTTCTGGGTAGTGGATAAG---.................................CTTCACTTTTATATAGGTAGTGCGTCTCTTATGGGAAATGCG