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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00614 phylogeny
for amino acid alignment


 
((((((((YJHR_ECOLI/276-303,(((((PLDA1_RICCO/326-364,((PLD2_HUMAN/437-464,PLD2_RAT/437-464),(SPO14_YEAST/488-515,YA2G_SCHPO/641-668))),((PLDG1_ARATH/364-399,(PLDB2_ARATH/439-474,PLDB1_ARATH/478-513)),PLDA2_ORYSA/333-372)),PLDA1_PIMBR/326-364),(Y988_STRMU/197-224,((CLS_PSEPU/220-247,CLS1_BACSU/237-264),YWJE_BACSU/141-168))),CLS_ECOLI/219-246)),((((((VENV_VARV/113-140,VENV_VACCV/113-140),((VENV_VACCP/113-140,VENV_VACCI/113-140),VENV_VACCC/113-140)),(VENV_MCV2/116-143,VENV_MCV1/116-143)),VENV_FOWPV/114-141),(VK04_VACCV/110-137,VK04_VACCC/110-137)),(((((VENV_VARV/307-334,VENV_VACCV/307-334),VENV_VACCP/307-334),(VENV_VACCI/307-334,VENV_VACCC/307-334)),((VENV_MCV1/310-337,VENV_MCV2/310-337),VENV_FOWPV/309-336)),(VK04_VACCV/320-346,VK04_VACCC/320-346)))),(PGS1_YEAST/177-203,(PSS_ECOLI/133-159,PSS_HAEIN/134-160))),((CLS_ECOLI/399-426,CLS1_BACSU/413-440),CLS_PSEPU/394-421)),(SPO14_YEAST/788-815,YA2G_SCHPO/941-968)),YWJE_BACSU/311-338),PGS1_YEAST/419-457),PSS_ECOLI/352-379,PSS_HAEIN/356-383);
((((((((YJHR_ECOLI/276-303:0.84800,(((((PLDA1_RICCO/326-364:0.00000,((PLD2_HUMAN/437-464:0.04039,PLD2_RAT/437-464:0.00000):0.17351,(SPO14_YEAST/488-515:0.29454,YA2G_SCHPO/641-668:0.17103):0.18972):0.43338):0.04443,((PLDG1_ARATH/364-399:0.03490,(PLDB2_ARATH/439-474:0.03904,PLDB1_ARATH/478-513:0.03410):0.07805):0.14022,PLDA2_ORYSA/333-372:0.22298):0.08881):0.00000,PLDA1_PIMBR/326-364:0.10358):0.67934,(Y988_STRMU/197-224:0.27188,((CLS_PSEPU/220-247:0.17899,CLS1_BACSU/237-264:0.19476):0.09916,YWJE_BACSU/141-168:0.29022):0.15486):0.18213):0.27989,CLS_ECOLI/219-246:0.34829):0.54075):0.39000,((((((VENV_VARV/113-140:0.00000,VENV_VACCV/113-140:0.00000):0.00000,((VENV_VACCP/113-140:0.00000,VENV_VACCI/113-140:0.00000):0.00000,VENV_VACCC/113-140:0.00000):0.00000):0.43469,(VENV_MCV2/116-143:0.00000,VENV_MCV1/116-143:0.00000):0.18388):0.11047,VENV_FOWPV/114-141:0.34333):0.83249,(VK04_VACCV/110-137:0.00000,VK04_VACCC/110-137:0.00000):0.17921):0.24746,(((((VENV_VARV/307-334:0.00000,VENV_VACCV/307-334:0.00000):0.00000,VENV_VACCP/307-334:0.00000):0.00000,(VENV_VACCI/307-334:0.00000,VENV_VACCC/307-334:0.00000):0.00000):0.24737,((VENV_MCV1/310-337:0.00000,VENV_MCV2/310-337:0.14540):0.13553,VENV_FOWPV/309-336:0.63619):0.00000):0.41715,(VK04_VACCV/320-346:0.00000,VK04_VACCC/320-346:0.00000):0.97422):0.24278):0.26757):0.16165,(PGS1_YEAST/177-203:0.47078,(PSS_ECOLI/133-159:0.14278,PSS_HAEIN/134-160:0.21654):0.48350):0.79771):0.13438,((CLS_ECOLI/399-426:0.45518,CLS1_BACSU/413-440:0.25279):0.21938,CLS_PSEPU/394-421:0.20409):0.07178):0.19073,(SPO14_YEAST/788-815:0.08924,YA2G_SCHPO/941-968:0.09734):0.45834):0.23550,YWJE_BACSU/311-338:0.16422):0.66077,PGS1_YEAST/419-457:0.50257):0.81064,PSS_ECOLI/352-379:0.08410,PSS_HAEIN/356-383:0.16884);