EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00611 alignment
(30 sequences with 348 bp)


O94466_SCHPO/33-133 CCAAAAGTCGAAGCGATCCTCAATTCG..................GAACTTGGTCTAGCAATCCTAAATGATCGCATTAAAGACTACCTCCTCACTTGCAAAGAACTCGCCGGATTCTTTAAA...AAGCGTTCCATTCTCGAAGAAGAAAGTGGAAAAAATTTACAAAAACTTGCTAAATCCTACCTAGAGACGTTT...---------...---------CAATCCAAACACCACTCTCCCCAATCTTTTTCCGCCTCTGTCATTACGAGTATGGAAATTCATGAACAACTTGCCAATCACAGTTTAACCCTTCAAAAAACTCTTTCTGCATTTTCCGATCAAGTC
Q9UVE3_ZYGRO/27-129 CAAGAGATTCAAAATGTTTTGAACTCT..................GATGTAGCTATTAATGCACTGCTAGGACGCTTGAAACAGTCCCTGTTGACTTGCGAAGAGTTTATCAAGTTTTTACGAaagGAAAGGTCTTTTTTGGAACAGGAACATGTAGAAGAATTGGGTAAGCAGTTTAAACACTTCTTTATGGATACG...---------...------ACTAATAGCAGCCCATCATTAAAGCGAAGGATTCATGACATTTTAGAATACGATGGAAAATTAGCTAAAGTCAAGAAAAGTTACGTGAGCGCTTTGCAAAAGATGTATGATGAAATGAGTGCCCTTCTA
RGD1_YEAST/33-134 CCAGAGATCAAGAAGGTGCTAAATTCC..................GATGTGGCAATTAACGCTTTGTTGAGCCGTTTAAAGCAGTCGTTGTTGACTTGTGAAGAGTTTATGAAATTTATTAGA...AAGAAATACGCCTTCGAAGAAGAGCACGTTCAGGAGCTCTCCAAGCAATATAAGCACTTTTTCAACATTCAG...---------...------GGTTCCACAAATTCATCCTTAAAAAAGATGATTCACGAAGTTTTGGGATTCGATGGCAAGATGGCTCAAGTAAAGCAGAGTTATATCACCGCCTTGCAGAAAATGTACTCCGAGATTAGTAGTCTTTTA
O13384_COCHE/102-199 AATGAGATCCTACACTCAGAC------..................---GTGGGCATCGCGACCCTGCTGAATCGCCTCAAAGCCAGCATTTCAAGTGCTAGGGACTTTGCGAGCTTTCTGAAG...CGCCGGGGCGCCCTTGAGGAGGAACATGCGGGCAGCTTGAAGAAACTCAGCCGGGGG---------------...------ACActcGACGGCGTGCGCAAGCCCGATTCACGACATGAGAGCTATCAGACTCAATTCGAGCAAGTCCTCCACGCCAACGAGCGCATCGCCGACAATGGCACCCAATTTGGGCTCGCCCTGCACGCCATGCACGAGAACCTC
Q9UUJ3_SCHPO/7-100 AATTCGTTCTGGTCAAGGGATTAT---..................ATTACGGGAATAAATCGTGCCCAACGTTTAATCAACGAAGGTGTTGAACAAAACGAAAAGCTATTACAGTTGTTACAT...ATTAGAGCAAAGTCAGCTTCATCTTGTTCTGACTTGCTGTTCAAATCGTTTTCAAAA---TTCAATAAGCAC...---------...------------------CATCCTTTAAATGAAGAAAGCAATGATCTTCCTTCTGAT------GCAGCCATACACCAGCTTTATGAAAGCTATTTAATGGAAGCGTCGTTGCACAAGAAGCTTGGGGAGCAATTA
RHG8_SCHPO/7-100 AATGGTTTTTGGAGTAAAGACTAC---..................GCGACTGGTGTGAAAAAACTTTTCGATTGCCTGGATAATGGAGTTGAAGAGAATGAGCAAGTAAAAAACTTGTTGAAG...TTATATAAAGAAGCGAATGAGGAATTTGGTGAAAAGCTTCAAGAAATAACGAAAGAA---------------...---------...---------TGTCTAAAAGGGAAAAAGCCAGAGAATACAGAAGACGGTGCTACTTCT---AACAAGGCTTTTGAAGGGTTGCGCTCCGAGATTGCTAATCAAGGAAAGCAACATATTCGTATTGCCAAGGACTTA
RGD2_YEAST/6-100 GACTATTTTTGGTCTGAAGAC---CTT..................GTCTCAGGTCTAGATGTGCTTTTTGATAGATTATACCATGGTTGTGAGCAATGCGACTTGTTCATTCAATTATTTGCG...TCAAGAATGCAATTTGAAGTCAGTCACGGGAGGCAGTTGTTTGGTATAGAAGCCGGT---------------...---------...---------ATGGACAATCTGAAGGCAGTGCAGGAAGATGAAGATGAAGGGGTGACAGTTTCGAGGGCCCTGAGGGGAATTCTACAGGAAATGTCTCAGGAAGGGACGCATCACTTGACAATAGCGTCGAACATA
Q19370_CAEEL/56-152 AAAGAGTTCCGCACGAAAATG------..................AGCGACCAGCTGAAATGTCTCGGAGATCGAACAGATGTACAGATGAGCAGTCTCTCCGAACTTCAGGATTACTTTCGG...AAACGAGGCGAAATCGAGTCAGAATATGCGTGTAAACTGGAAAAACTATCCAAAAGTATAGCTCAAAAGCAC...---------...---------AAATCAGAAAGAAGTCGACGAGAAGGTTGGCCACAGCACACCTCCAGT------ACAGTATGGCATACGTTAGTTGAACAGACGAAAGAAGAATACAAAAAGCGTCAATCTCTTGGAGAACTCTAT
RHG04_HUMAN/22-124 AAAGAGATGCGCTGGCAGCTG------..................AGCGAGCAGCTGCGCTGCCTGGAGCTGCAGGGCGAGCTGCGGCGGGAGTTGCTGCAGGAGCTGGCAGAGTTCATGCGG...CGCCGCGCTGAGGTGGAGCTGGAATACTCCCGGGGCCTGGAAAAGCTGGCCGAGCGCTTCTCCAGCCGTGGAggcCGC------...CTGGGGAGCAGCCGGGAGCACCAAAGCTTCCGGAAGGAGCCGTCCCTCCTGTCGCCCTTG---CACTGCTGGGCGGTGCTGCTGCAGCACACGCGGCAGCAGAGCCGGGAGAGCGCGGCCCTGAGTGAGGTGCTG
O43059_SCHPO/11-100 GATGCGTTTTTGTCAAACTACTCTCCA..................AACGACAGCATGTCGATCTTTCGACAGCGCCTAGAGCAAGTTCGCCTAGACAACGACATGCTTTCGCAGTGGATTCGT...GAGCGAATGGATATTGAACGGCAATACTCAGATCAATTACATAAGCTTGCAATGAAC---------------...---------...------------------------ATGCAAGAAAAAAACAATTCATCGTTTGCTTTT---AATTATGCTTGGAAACAGCTCGAGGGAGAAACCCTTGAAATTTCAAGATATCACAGTCAAATCATTGGACAAATA
Q9VDI1_DROME/15-103 GATTCCTTCTGGGAGCCCGGC------..................------AACTACAAACGCACCACCAAGCGGATCGAGGATGGTTACAAACTCTGCAATGACCTACAGCAACTGATTCAG...GAGCGTGCCGACATCGAGAAGGGATATGCGAAAAGCCTGCGCACCTGGTCAAAGAAA---------------...---------...---------------TGGGGTGAACTCATTGAGAAAGGCCCGGAATACGGAACCACG---GAGGCAGCCTGGAAGGGCGTTCTGACGGAATCGGAACGCATCTCCGACGTTCACATGAAGATCAAGGACAATCTC
PACN1_MOUSE/14-102 GATAGCTTCTGGGAGGTGGGG------..................------AACTACAAGCGGACGGTGAAGCGCATCGACGATGGGCACCGCCTGTGCAACGACCTCATGAGCTGCGTGCAG...GAGCGCGCCAAGATCGAGAAGGCATACGCGCAGCAGCTCACCGACTGGGCCAAGCGC---------------...---------...---------------TGGCGCCAGCTCATCGAGAAAGGTCCTCAGTATGGCAGCCTG---GAGCGGGCGTGGGGCGCCATGATGACAGAAGCAGATAAGGTCAGCGAGCTGCACCAGGAGGTGAAGAACAGCCTG
PACN2_HUMAN/16-104 GACAGCTTCTGGGAGGTCGGG------..................------AACTACAAGCGGACTGTGAAGCGGATCGACGATGGCCACCGCCTGTGCAGCGACCTCATGAACTGCCTGCAT...GAGCGGGCGCGCATCGAGAAGGCGTATGCGCAGCAGCTCACTGAGTGGGCCCGGCGC---------------...---------...---------------TGGAGGCAGCTTGTGGAGAAAGGGCCCCAGTACGGGACCGTG---GAGAAGGCCTGGATGGCCTTCATGTCCGAGGCAGAGAGGGTGAGCGAGCTGCACCTCGAGGTGAAGGCCTCACTG
Q09989_CAEEL/8-96 CCAGGATTCTGGGAAGTTGGA------..................------AGCTACAAGCATAATGTAAAACGATTCAAGGATGGAGTTGAGCAACTGGACGATTATTGCAAGATGAGCCGG...GAAAGAGCCGAGATCGAAGCAAAGTACAGCAAGATGCTCTCTCAACATGCTGAAAAA---------------...---------...------------------TGGAGGGCGCACGTTGATCGAACGGTATCTGCCGGCTCAGTAAAAACCGTGTGGAATGAGCTTATTGGAGAGGCAACTGCTCTTTCAAGAGTTCATAACAGTCTTAAGGATTGTTTG
O43585_HUMAN/5-98 CTGCAGTTCAAAGATGCCTTTTGGTGCagggac...ttcacagccCACACGGGCTACGAGGTGCTGCTGCAGCGGCTTCTGGATGGCAGGAAGATGTGCAAAGACATGGAGGAGCTACTGAGG...CAGAGGGCCCAGGCGGAGGAGCGGTACGGGAAGGAGCTGGTGCAGATCGCA---------------------...---------...------------------------CGGAAGGCAGGTGGCCAGACGGAGATCAACTCCCTGAGGGCCTCCTTTGACTCCTTGAAGCAGCAAATGGAGAATGTGGGCAGCTCACACATCCAGCTGGCCCTGACCCTG
PPIP2_MOUSE/8-97 AACTTCTGGAGCACGGACATTCTCAGC..................ACCATTGGCTACGACAGCATTATCCAGCACCTGAACAATGGCCGTAAGAACTGCAAGGAGTTTGAAGACTTTTTGAAA...GAAAGAGCATCAATTGAAGAGAAATATGGCAAAGACCTGCTGAACCTCTCCAGGAAG---------------...---------...---------------------------AAGCCGTGTGGACAGTCTGAGATCAATACCTTGAAGAGAGCCCTTGAGGTCTTCAAGCAGCAAGTAGACAACGTGGCTCAATGTCACATTCAGCTTGCGCAGACTCTA
CDC15_SCHPO/24-110 GATAATTTCTGGGGATCTGAA------..................GATGCGGGTATGGATGCTCTTATGTCCCGAACAAAATCTTCTCTTTCCGTATTAGAATCAATTGATGAATTTTACGCA...AAGCGTGCTTCTATTGAGCGTGAGTACGCATCTAAACTGCAAGAGTTAGCTGCCAGC---------------...---------...---------------------------TCAGCAGACATCCCAGAAGTTGGATCAACTTTA---AATAATATTTTATCTATGAGAACTGAAACAGGGAGTATGGCCAAAGCGCATGAAGAAGTCTCACAACAGATA
IMP2_SCHPO/20-106 AATTACTTTTGGGGTGCAAAT------..................GATGAGGGTTATCATGCTTTACTTTCGCGTTTTAGCGATGTGAAACACATTAATGAAGAGCTTCGGTCGTTTTATCAT...GAAAGAGCGAACATTGAAGAAGATTATGCCAAGCGAATGGCAAAGTTGTCT---------------------...---------...------------------------CGAACAACCTTCAGTTCTTTGGAAACTGGTTGCCTCAAAGAATCAGTCCAAGTTATGAAAGCTGAAGTTGACAATATGGCAAAGTCTCATTTGCAGATTTCTCAGTTGCTT
GAS7_MOUSE/147-241 GACTACTTTTGGGCGGACAAGAAGGACccacaaggcaatggcacgGTGGCTGGCTTTGAACTGCTGCTGCAGAAGCAACTGAAAGGCAAGCAGATGCAGAAGGAGATGTCCGAGTTCATCCGG...GAAAGGATAAAGATTGAAGAAGAATATGCAAAGAACCTGGCTAAGCTCTCTCAGAAC---------------...---------...------------------------TCCTTGGCTGCCCAGGAGGAAGGCTCCTTGGGA------GAGGCATGGGCCCAAGTAAAGAAGAGCCTGGCAGATGAGGCTGAAGTTCATCTCAAGTTCTCTGCCAAGCTC
CYK2_YEAST/7-97 GCTTGTTTTTGGGACCCAAAC------..................GACAATGGTGTGAACATCCTTCTGGGTCACATTTCTCAGGGAATAAGATCTTGCGACTCAATGATACTTTTCTTTAAG...CAGCGTAGTGAGCTTGAGAAGGACTATGCCAGGCGGCTTGGAGCCATCACGGGAAAA---------------...---------...---------CTAGACAAAGACATTGGAACAAACATGGATTATGGAAAG---------TTGAATGAAACATTTAATGTGGTGCTCAGTGTTGAGAAAGCTCGAGCACAATCGCATTCCAAGCAAAGTGAGATTCTT
Q9VSU8_DROME/11-108 GTGAAATTCCTCAAGAATTTGCAC---..................ACGGAGCAGGTGGCCAAGCTGCAGCTGAAGAATCAGCATGAATGCGACCTCCTGGAGGACATCCGGCAGTTCACCATC...AAGCGTTCCGCTGTCGAGAAGTCATACAGTGAGTCGCTGCTGAAGATCTCATCGCAGTATCTCAACAAGAAG...---------...---------ATACCCAATATACCAGATATTAAGATGGAGGGCATGGAGGAACGCTGG------AACATGTGGAGCGTTTGGCGCACTGTGCTCGAGGAGAATGAGAAACTGGCTCGTGCTCGATTGGCCGCCATA
BZZ1_YEAST/5-110 TTATCGATTGGTAATGAAATT------..................AAAGATTCATTTAAGGAAACCCATAAATGGGTCCAAAATAACTTAAAATGGTTGAAGGACATTGAGCAATTTTATCGG...GAAAGGGCTAAGTTAGAAAAAGACTACAGCGAGAGATTATCTCGCTTATCAGCAGAGTACTTTAATAAGAAGtctTCGACCTCAgttCCTATCTCGGTAGGTGACACACCTACTACCACGCCAGGGTCCATTGAAGCTGCAGGTGTG---GTTGCATGGAATGAAATTCTATCTCAGACTGATATGATTTCCAAGGATCATGATCAGTTATCAACCGACTTT
YB65_SCHPO/6-111 TACAAATTTAGTGATGAACTT------..................CACGACGATTTTAAAGTTGTCGACAGTTGGATTAATAATGGCGCGAAATGGCTTGAAGATATTCAATTGTACTACAAA...GAAAGAAGTTCTATTGAAAAAGAATATGCTCAGAAATTAGCCAGTCTTTCGAATAAATATGGGGAGAAGAAAtccAGAAAATCAtcaGCCCTTTCAGTCGGAGATACTCCGGCAATGTCTGCTGGCTCTTTAGAATGTGCTTCTTTA---ACAACATGGTCTAAAATTTTGGATGAGTTAACGCGCTCATCAAAAACTCATCAAAAGCTATCCGATGACTAT
CIP4_HUMAN/1-94 ATGGATTGGGGCACTGAGCTG------..................TGGGATCAGTTCGAGGTGCTCGAGCGCCACACGCAGTGGGGGCTGGACCTGTTGGACAGATATGTAAAGTTCGTGAAA...GAACGCACCGAAGTGGAACAGGCTTACGCCAAACAACTGCGGAGCCTGGTGAAAAAA---------------...---------...---------TATCTGCCCAAGAGACCTGCCAAGGATGATCCTGAGTCCAAATTCAGCCAGCAACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTTGCAGGCCAGCGGGAGCTGGTGGCTGAGAACCTC
Q96RU3_HUMAN/63-156 ATGAGCTGGGGCACCGAGCTC------..................TGGGATCAGTTTGACAACTTAGAAAAACACACACAGTGGGGAATTGATATTCTTGAGAAATATATCAAGTTTGTGAAA...GAAAGGACAGAGATTGAACTCAGCTATGCAAAGCAACTCAGGAATCTTTCAAAGAAGTACCAACCTAAAAAG...---------...------------------AACTCGAAGGAGGAAGAAGAATACAAGTATACGTCATGT------AAAGCTTTCATTTCCAACCTGAACGAAATGAATGATTACGCAGGGCAGCATGAAGTTATCTCCGAGAACATG
Q9XUS7_CAEEL/6-97 AGATTTTTCACGGTTCAGGAC------..................------CCATCAAACGCGCTCCTCTCGTACACACAAAAGGGAATAGATTTTTTCGAAAAATTAGGTCAATTCTCGAAG...GAAAAAGCTGCGATTGAGGAGGAATATTCTACGAAATTGAGGAGTCTCGCAAAGAAATATGCGAAAAAATCG...---------...------------GAAGAAGATGATGAAATTCTAAAAAGTGTAAGCTACACCAGCTCA------------TTCAACTCATTTCTTCAACAACTTGATCAGATTGCCACTCGACATCAAACGTCGGCGGAGCACATC
O76978_9METZ/7-106 TGTAACTTCGGAACAGACTTGATCACT..................AGAGCTGGCAGTGAGGCCTTGTTACGACTGAACGATGAGGAAATCCGCTTGCTGGAGTCAATGAAAACCTATATGACC...AAGCGAGCCAAGGCTGACCAGGACTACGCGAAGGAGTTGCTCAGGCTCCGCGTGGAT---------------...---CGGAGCactGGCGGAGCGCTGCACCGCTCGGACAGCACCTCAGCTGAAGAGACCAGCCCCATCCTG------AAGGCATGGCATCAATTTCAGGCAGAGACGGACCGTGTGTCATCCCTGATTGCCCAGCACGCGCAAGCACTC
P70451_MOUSE/1-92 ATGGGATTTGGGAGTGACCTG------..................AAGAACTCACAGGAAGCTGTGTTAAAGTTGCAAGACTGGGAACTACGGTTGCTGGAGACAGTGAAGAAATTTATGGCT...CTGAGAATAAAGAGTGATAAAGAATATGCATATACTCTACAGAATCTTTGTAATCAA---------------...---------...---------GTTGATAAAGAAAGCACTGTGCAAGTGAATTATGTCAGCAACGTGTCC------AAGTCTTGGCTACTGATGATTCAGCAGACAGAACAGCTTAGTAGGATAATGAAGACACATGCAGAGGACTTG
FES_MOUSE/1-94 ATGGGCTTCTCTTCAGAGCTGTGCAGC..................CCCCAGGGCCACGGGGCAGTGCAGCAGATGCAGGAAGCTGAGCTGCGCTTATTGGAGGGCATGAGGAAGTGGATGGCC...CAGAGGGTCAAGAGTGACCGGGAATATGCAGGATTGCTTCACCACATGTCCTTGCAG---------------...---------...---------GACAGCGGAGGCCAGAGCTGGAGCAGCGGCCCCGACAGCCCTGTCAGC------CAGTCCTGGGCAGAGATAACAAGCCAGACCGAGAACTTGAGCCGGGTGCTGCGGCAGCATGCAGAAGATCTG
FPS_DROME/1-94 ATGGGCTTCTCATCAGCCCTCCAAAGT..................CGCGCCGCCCACGAGGCGCTGATCGTCCGCCAGGATGCCGAACTCCGGCTAATGGAGACAATGAAGCGATCCATCCAG...ATGAAGGCCAAGTGCGACAAGGAGTACGCCATCAGCCTGACCGCTGTGGCCCAGCAG---------------...---------...---------GGTCTCAAGATCGATCGGGCTGACGAAATGCAAGGCAGCCTGATCTCC------AAATCCTGGCGATCCTACATGGATGAACTGGACCACCAGGCCAAACAGTTCAAGTTCAACGCGGAGCAGCTG