EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00600 - Flu_NS1)
Influenza non-structural protein (NS1)
(Pfam reference: accession no. PF00600)
(Interpro reference: accession no. IPR000256)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
2 sequences @ 217 aa
(ave. pairwise identity: 0.71)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.37)
nucleotides
(available for above)
2 sequences @ 651 bp
(ave. pairwise identity: 0.70)
New Hampshire format
(total tree length: 0.38)
amino acids, restricted set
(corresp. to available nt seqs)
2 sequences @ 217 aa
(ave. pairwise identity: 0.71)
New Hampshire format
(total tree length: 0.37)