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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00595 phylogeny
for nucleotide alignment


 
((((((GSPC_KLEPN/190-270,((YYXA_BACSU/285-380,((DEGQ_ECOLI/365-444,HTOA_HAEIN/377-455),(DEGP_ECOLI/387-463,DEGP_SALTY/386-464))),(((DEGP_BARHE/289-378,((ECFE_ECOLI/203-277,YAEL_HAEIN/202-273),SP4B_BACSU/103-183)),(DEGS_ECOLI/248-336,DEGS_HAEIN/242-322)),(HTOA_HAEIN/268-358,(DEGQ_ECOLI/257-346,(DEGP_ECOLI/279-368,DEGP_SALTY/280-369)))))),((PSD9_YEAST/99-191,((PTN3_HUMAN/510-595,PTN4_HUMAN/516-602),PTP1_CAEEL/616-703)),YNM3_YEAST/290-375)),(ZO1_MOUSE/423-501,ZO1_HUMAN/411-489)),((YPEB_SYNP2/102-182,(PRC_HAEIN/244-328,PRC_ECOLI/238-320)),((((PDLI1_RAT/5-82,(PDLI4_HUMAN/4-81,PDLI4_RAT/4-81)),(((NOS1_HUMAN/17-96,NOS1_RAT/17-96),(((EM55_FUGRU/73-151,EM55_HUMAN/71-149),LIN2_CAEEL/546-624),(APBA1_HUMAN/656-740,APBA2_MOUSE/500-584))),(APBA1_HUMAN/746-820,APBA2_MOUSE/591-663))),(((((DSH_DROME/252-337,((DVLL_HUMAN/251-336,DVL1_MOUSE/251-336),DVL2_XENLA/254-339)),(DLG1_DROME/506-584,DLG4_RAT/313-391)),AFAD_HUMAN/993-1073),(DLG1_DROME/330-418,DLG4_RAT/160-244)),(DLG1_DROME/216-300,DLG4_RAT/65-149))),((LIMK1_HUMAN/165-255,(LIMK1_MOUSE/165-255,LIMK1_RAT/165-255)),(LIMK2_CHICK/152-236,(LIMK2_HUMAN/152-236,LIMK2_RAT/152-236)))))),(ZO1_HUMAN/174-249,ZO1_MOUSE/186-261)),ZO1_MOUSE/23-107,ZO1_HUMAN/11-95);
((((((GSPC_KLEPN/190-270:1.05693,((YYXA_BACSU/285-380:0.65662,((DEGQ_ECOLI/365-444:0.46899,HTOA_HAEIN/377-455:0.32136):0.12768,(DEGP_ECOLI/387-463:0.06471,DEGP_SALTY/386-464:0.12166):0.37030):0.14470):0.08272,(((DEGP_BARHE/289-378:0.34719,((ECFE_ECOLI/203-277:0.28465,YAEL_HAEIN/202-273:0.56840):0.43500,SP4B_BACSU/103-183:0.52199):0.31193):0.02113,(DEGS_ECOLI/248-336:0.76115,DEGS_HAEIN/242-322:0.34094):0.20996):0.17846,(HTOA_HAEIN/268-358:0.24660,(DEGQ_ECOLI/257-346:0.22567,(DEGP_ECOLI/279-368:0.09187,DEGP_SALTY/280-369:0.07588):0.19326):0.24953):0.16211):0.03332):0.11893):0.21702,((PSD9_YEAST/99-191:0.69948,((PTN3_HUMAN/510-595:0.37991,PTN4_HUMAN/516-602:0.07894):0.17616,PTP1_CAEEL/616-703:0.27726):0.23970):0.00000,YNM3_YEAST/290-375:0.82919):0.10721):0.07085,(ZO1_MOUSE/423-501:0.00000,ZO1_HUMAN/411-489:0.05275):0.43731):0.13987,((YPEB_SYNP2/102-182:0.50639,(PRC_HAEIN/244-328:0.34820,PRC_ECOLI/238-320:0.20762):0.41726):0.27073,((((PDLI1_RAT/5-82:0.30757,(PDLI4_HUMAN/4-81:0.06962,PDLI4_RAT/4-81:0.07149):0.17516):0.48972,(((NOS1_HUMAN/17-96:0.00819,NOS1_RAT/17-96:0.11428):0.39224,(((EM55_FUGRU/73-151:0.24329,EM55_HUMAN/71-149:0.16886):0.10380,LIN2_CAEEL/546-624:0.23553):0.46575,(APBA1_HUMAN/656-740:0.10001,APBA2_MOUSE/500-584:0.19651):0.35913):0.13522):0.10027,(APBA1_HUMAN/746-820:0.14909,APBA2_MOUSE/591-663:0.18493):0.43922):0.15254):0.12779,(((((DSH_DROME/252-337:0.13400,((DVLL_HUMAN/251-336:0.04286,DVL1_MOUSE/251-336:0.05592):0.04736,DVL2_XENLA/254-339:0.16485):0.12841):0.33162,(DLG1_DROME/506-584:0.19936,DLG4_RAT/313-391:0.30076):0.19471):0.04622,AFAD_HUMAN/993-1073:0.57586):0.09257,(DLG1_DROME/330-418:0.31997,DLG4_RAT/160-244:0.24445):0.05273):0.10264,(DLG1_DROME/216-300:0.27415,DLG4_RAT/65-149:0.19494):0.18889):0.04575):0.07698,((LIMK1_HUMAN/165-255:0.07755,(LIMK1_MOUSE/165-255:0.01866,LIMK1_RAT/165-255:0.02100):0.01535):0.11833,(LIMK2_CHICK/152-236:0.09071,(LIMK2_HUMAN/152-236:0.04497,LIMK2_RAT/152-236:0.07149):0.14112):0.31632):0.72749):0.13618):0.17256):0.07221,(ZO1_HUMAN/174-249:0.00924,ZO1_MOUSE/186-261:0.06898):0.50029):0.60106,ZO1_MOUSE/23-107:0.00219,ZO1_HUMAN/11-95:0.06563);