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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00595 phylogeny
for amino acid alignment


 
(((((((((((SP4B_BACSU/103-183,GSPC_KLEPN/190-270),((((DEGQ_ECOLI/365-444,HTOA_HAEIN/377-455),(DEGP_ECOLI/387-463,DEGP_SALTY/386-464)),((DEGS_ECOLI/248-336,DEGS_HAEIN/242-322),(DEGP_BARHE/289-378,(HTOA_HAEIN/268-358,(DEGQ_ECOLI/257-346,(DEGP_ECOLI/279-368,DEGP_SALTY/280-369)))))),YYXA_BACSU/285-380)),PSD9_YEAST/99-191),SIPA1_MOUSE/682-754),(((((AFAD_HUMAN/993-1073,((DVLL_HUMAN/251-336,DVL1_MOUSE/251-336),(DSH_DROME/252-337,DVL2_XENLA/254-339))),((((DLG1_DROME/216-300,DLG4_RAT/65-149),(DLG1_DROME/330-418,DLG4_RAT/160-244)),(DLG1_DROME/506-584,DLG4_RAT/313-391)),(ZO1_MOUSE/23-107,ZO1_HUMAN/11-95))),(ZO1_MOUSE/423-501,ZO1_HUMAN/411-489)),YQI7_CAEEL/25-114),(((PTN3_HUMAN/510-595,PTN4_HUMAN/516-602),PTP1_CAEEL/616-703),(PDLI1_RAT/5-82,(PDLI4_HUMAN/4-81,PDLI4_RAT/4-81))))),YPEB_SYNP2/102-182),((((((NOS1_HUMAN/17-96,NOS1_RAT/17-96),(APBA1_HUMAN/746-820,APBA2_MOUSE/591-663)),(APBA1_HUMAN/656-740,APBA2_MOUSE/500-584)),((EM55_FUGRU/73-151,EM55_HUMAN/71-149),LIN2_CAEEL/546-624)),((ECFE_ECOLI/203-277,YAEL_HAEIN/202-273),(PRC_HAEIN/244-328,PRC_ECOLI/238-320))),YNM3_YEAST/290-375)),(ZO1_HUMAN/174-249,ZO1_MOUSE/186-261)),(LIMK1_HUMAN/165-255,(LIMK1_MOUSE/165-255,LIMK1_RAT/165-255))),LIMK2_CHICK/152-236),LIMK2_HUMAN/152-236,LIMK2_RAT/152-236);
(((((((((((SP4B_BACSU/103-183:1.47847,GSPC_KLEPN/190-270:1.57120):0.32213,((((DEGQ_ECOLI/365-444:0.51263,HTOA_HAEIN/377-455:0.41086):0.23474,(DEGP_ECOLI/387-463:0.03417,DEGP_SALTY/386-464:0.08976):0.41090):0.39409,((DEGS_ECOLI/248-336:1.01375,DEGS_HAEIN/242-322:0.51826):0.39879,(DEGP_BARHE/289-378:0.57970,(HTOA_HAEIN/268-358:0.35853,(DEGQ_ECOLI/257-346:0.21013,(DEGP_ECOLI/279-368:0.01591,DEGP_SALTY/280-369:0.02317):0.27375):0.13938):0.27774):0.11153):0.15278):0.11290,YYXA_BACSU/285-380:1.09277):0.00000):0.32903,PSD9_YEAST/99-191:1.47882):0.34220,SIPA1_MOUSE/682-754:1.13654):0.05824,(((((AFAD_HUMAN/993-1073:0.61540,((DVLL_HUMAN/251-336:0.01238,DVL1_MOUSE/251-336:0.00000):0.03483,(DSH_DROME/252-337:0.19128,DVL2_XENLA/254-339:0.05208):0.02419):0.55892):0.21418,((((DLG1_DROME/216-300:0.20028,DLG4_RAT/65-149:0.21025):0.25569,(DLG1_DROME/330-418:0.33767,DLG4_RAT/160-244:0.19425):0.26799):0.21099,(DLG1_DROME/506-584:0.19754,DLG4_RAT/313-391:0.24694):0.34577):0.01389,(ZO1_MOUSE/23-107:0.00000,ZO1_HUMAN/11-95:0.00000):0.83558):0.10363):0.16030,(ZO1_MOUSE/423-501:0.00000,ZO1_HUMAN/411-489:0.00000):0.90528):0.12876,YQI7_CAEEL/25-114:0.74011):0.13148,(((PTN3_HUMAN/510-595:0.36021,PTN4_HUMAN/516-602:0.11649):0.24089,PTP1_CAEEL/616-703:0.15042):0.49420,(PDLI1_RAT/5-82:0.11743,(PDLI4_HUMAN/4-81:0.00000,PDLI4_RAT/4-81:0.06270):0.35670):0.79250):0.17354):0.12602):0.23983,YPEB_SYNP2/102-182:1.08624):0.09421,((((((NOS1_HUMAN/17-96:0.00000,NOS1_RAT/17-96:0.01306):0.74445,(APBA1_HUMAN/746-820:0.06091,APBA2_MOUSE/591-663:0.18669):0.82989):0.46926,(APBA1_HUMAN/656-740:0.11969,APBA2_MOUSE/500-584:0.10172):0.52733):0.06457,((EM55_FUGRU/73-151:0.23869,EM55_HUMAN/71-149:0.16588):0.12572,LIN2_CAEEL/546-624:0.21452):0.60664):0.11494,((ECFE_ECOLI/203-277:0.73770,YAEL_HAEIN/202-273:0.35021):1.00746,(PRC_HAEIN/244-328:0.26019,PRC_ECOLI/238-320:0.36772):0.64127):0.27827):0.13164,YNM3_YEAST/290-375:1.50025):0.20729):0.12286,(ZO1_HUMAN/174-249:0.00000,ZO1_MOUSE/186-261:0.02540):0.81402):1.09270,(LIMK1_HUMAN/165-255:0.00000,(LIMK1_MOUSE/165-255:0.00000,LIMK1_RAT/165-255:0.01273):0.01274):0.18913):0.46252,LIMK2_CHICK/152-236:0.10453):0.10248,LIMK2_HUMAN/152-236:0.00000,LIMK2_RAT/152-236:0.03635);