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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00595 - PDZ)
PDZ domain (Also known as DHR or GLGF)
(Pfam reference: accession no. PF00595)
(Interpro reference: accession no. IPR001478)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
61 sequences @ 114 aa
(ave. pairwise identity: 0.23)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 39.09)
nucleotides
(available for above)
59 sequences @ 342 bp
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 26.01)
amino acids, restricted set
(corresp. to available nt seqs)
59 sequences @ 114 aa
(ave. pairwise identity: 0.23)
New Hampshire format
(total tree length: 37.09)