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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00565 alignment
(18 sequences with 187 aa)


YHCR_BACSU/376-517 GEYEGIVDRVVDG-DTIHLKSPVLG....................-TTKIRFVNVDAPETYHTPKNDAD---....----ENQLRFGKKASDYLKTVLSPGDKITVKVGS..eAKDSYGRLLGQVITE----.---SGSNVNLELVKNGYAPTYF-IWPVD.NEEDYQQFQAAVAAAKKDQKGIWNE
Y1439_METJA/53-204 EHYYGKVVKVVDG-DTVYVEVNG--....................ELWKIRLLGVDTPEIHKRNNPYEYYLLngtpITDTKYLKEWGYKAKHFAEKELK-NKTVIIVFDNeapKKDKYGRYLAYIFINNSN-.---NLINFNEELLKYGYAR----VYIS-.NFELKDEFLNVEREAKENRVGLWNW
O58971_PYRHO/30-175 KELHGKVIKVVDG-DTLYVKLDDG-....................EVVKVRLVGVDAPELEEGLMRPGEYPG....IHNMTCLIKYGELAKEFLKNITL-GKSVTLEFDSiqgRKDKYGRLLVYMYLN----.----GTDINAELIKMGFAR--V-FYEK-.RFEKIKEYSKLEDDARKRRLNLWSC
P94492_BACSU/64-197 KLVNVTLDRAIDG-DTIKVIYNG--....................KKDTVRYLLVDTPETKKPNS-------....-----CVQPYGEDASKRNKELVN-SGKLQLEFDKgd.RRDKYGRLLAYVYVD----.----GKSVQETLLKEGLARVAY-VYEP-.NTKYIDQFRLDEQEAKSDKLSIWSK
NUC_STAAU/90-224 HKEPATLIKAIDG-DTVKLMYKG--....................QPMTFRLLLVDTPETKHPKK-------....-----GVEKYGPEASAFTKKMVENAKKIEVEFDKgq.RTDKYGRGLAYIYAD----.----GKMVNEALVRQGLAKVAY-VYKP-.NNTHEQHLRKSEAQAKKEKLNIWSE
NUC_STAIN/37-168 RGESYLVKRVIDG-DTIIIDKDG--....................QDERVRLIGVDTPETVKPNT-------....-----PVQPYGKAASNFTKKHLT-NQRVRLEYDR.e.PKDKYGRTLAYVWLG----.----DEMFNVKLAKEGLAR-AK-FYPP-.NDKYRILIEQAQKEAQKKQLNIWER
NUC_STAHY/38-169 NEQTYKVIRVIDG-DTIIVDKDG--....................KQQNLRMIGVDTPETVKPNT-------....-----PVQPYGKEASDFTKRHLT-NQKVRLEYDK.q.EKDRYGRTLAYVWLG----.----KEMFNEKLAKEGLAR-AK-FYRP-.NYKYQERIEQAQKQAQKLKKNIWSN
O66926_AQUAE/19-168 ELIPCKVVRVVDG-DTFRCVPEGKS....................RFIKVRLMGIDTLETNNMKKGMGQAKWf...YGGIRTVKEFGKKAKEFSKRLID-KKVVYLELPVr..KMDNNGRYLAYVWLDEYR-.----NKMLNLLLVKEGLAF-VF-IIPP-.QVKYLKELGEAQEEAYKDRRGFWKY
YFI3_ECOLI/19-140 ADIHGRVVRVLDG-DTIEVMDSR--....................KAVRIRLVNIDAPEKK-----------....-------QDYGRWSTDMMKSLVAGKTVTVTYFQR...--DRYGRILGQVYA-----.--PDGMNVNQFMVRAGAAWVYE-QYN--.---TDPVLPVLQNEARQQKRGLWSD
PAB4_ECOLI/130-261 AELRGEVVRIIDG-DTIDVLVDK--....................QPVRVRLVDIDAPEKR-----------....-------QAFGERARQALAGMVFRRHVLVDEKDT...--DRYGRTLGTVWVNMELAsRPPQPRNVNAAMVHQGMAWAYR-FHGR-.A--ADPEMLRLEQEARGKRVGLWSD
NUC_SHIFL/25-156 ADFRGEVVRILDG-DTIDVLVNR--....................QTIRVRLADIDAPESG-----------....-------QAFGSRARQRLADLTFRQEVQVTEKEV...--DRYGRTLGVVYAPLQYPgGQTQLTNINAIMVQEGMAWAYR-YYGK-.P--TDAQMYEYEKEARRQRLGLWSD
Y1296_HAEIN/24-145 EKNTCRVVKISDG-DTLTCLTKGN-....................KSIKVRLAEIDAPEKS-----------....-------QAFGQKSKKTLSDLVYQKNVRLARKGK...--DRYQRTLAVVYYQ----.----KQNINLEMVKQGMAWAYK-QYS--.---HDPIYLQAQENAQAKGIGLWAD
Y38K_CORSE/202-321 KNIVDAGYRVLSGPNNEDILARK--....................--YRIRLRGIDSPESS-----------....-------MPFGKEAKEELIKLVVGKCLTVHIYEE...--DRYGRSVGDIYCN----.----GQFIQEKMLKKGLAWHYT-AYD--.---KRPQLSKWEEKARAARVGLWAS
YGI5_YEAST/124-261 -KIQKAKSQFLKL--NVPYKNRKNL....................PTIPIRLCGIDAPERAHFGN-------....-----PAQPFGNEALIWLQNRILGKKVWVKPLSI...--DQYNRCVARVSYWDWFG.---GWKDLSLEMLKDGLAVVYEGKVNTE.FDDREDKYRYYEFLARSRKKGLWIQ
O60168_SCHPO/55-216 KTMFGYVTRVGDG-DNFRFYHTPGGrllgwhwlrkvpcsrsdlsnETISVRLAGIDAPESAHFGK-------....-----QEQPYALEAKEFLHNKLYHKSVRIIPLKI...--DRYARLVAGVQYYPIP-.HFFWKKDIGPQMIRKGLAVVYEGSDGVF.CPTKKECLLALEIVAKKKKLSLWSQ
Q19328_CAEEL/524-668 GRAEGVVEFLSGGSRLRIYIPKET-....................VLITFLLGGINCPKGARVGPGGVSTG-....-----AAEPFADEAAAFTRKLVLQHEVQLEVEST...--DKNGNFVGYLYVSPDGN.-TSRAINLSEALVENGLASLHFTAERS-.--GHYNALLSAENKAKKAKKNIWAN
O60040_AJECA/491-624 RKVPGVVDFVKSGSRFTILLPKDN-....................AKLTLVLSGIRAPRSARNPG-------....----ETGEPFGQEAHDFAYRRCMQRDVEIDVETI...--DKVGGFIGSLYIN----.----RESFSKILVEEGLATVHA--YSAE.QGGHAAELFAAEKKAKEARKGLWHD
O60040_AJECA/324-462 AQADYVVTRVFSA-DTIFVRTKTGK....................DEKRISLSSVRHPRTSDPKQ-------....-------APFILEAKEFMRKKLIGKHVKVKIDGKrpaSEGYEEREVGTVMSG----.----NTNIALALVQAGYASVIRHRRDDDdRSPEYDDLLRAEEAAQKEGKGMWSS