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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00564 alignment
(63 sequences with 112 aa)


REF2P_DROME/3-88 EKLLKITYQGAGPQk....kINAYLRMPSqNYTILRREIELYLFQErq...lpkCDVRTFWIDADK-DEIEIVNQNDYEIFLAKC-------.......-.-.ESNMHVQVA
NCF4_MOUSE/237-329 TNWLRCYFYEDTGKtikdiaVEEDLSSTP.LFKDLLALMRREFQR-........EDIALSYQDAEG-DLVRLLSDEDVGLMVKQARGLPSQ-.......KrLfPWKLHVTQK
NCF4_HUMAN/237-329 TNWLRCYYYEDTIStikdiaVEEDLSSTP.LLKDLLELTRREFQR-........EDIALNYRDAEG-DLVRLLSDEDVALMVRQARGLPSQ-.......KrLfPWKLHITQK
O96611_DICDI/15-101 FIRIKCILGDDIRI......--IKFNSNI.SYGGLMNQLEQDFQC-........PISIHQYEDYEG-DKVTVKSKDDIMEALTMYFELKALN.....ptKiI.STKFFLKQL
Q9D222_MOUSE/18-97 VIRIKIPNSGAVDW......-TVHSGPQL.LFRDVLDVIGQVLPEA........TTTAFEYEDEDG-DRITVRSDEEMKAMLSYY-------.......YsT.VMEQQVNGQ
Q13502_HUMAN/1-82 -RRFSFCFSPEPEA......-EAEAAPGPrPCERLLNRVAALFPVLr......pGGFQAHYRDEDG-DLVAFSSDEELTMAMSYVKDD----.......-.-.IFRIYIKEK
Q99JM8_MOUSE/20-102 IRRFSFCFSPEPEA......-EAQAAAGPgPCERLLSRVAVLFPTLr......pGGFQAHYRDEDG-DLVAFSSDEELTMAMSYVKDD----.......-.-.IFRIYIKEK
O49385_ARATH/317-396 TRTIKLVHGDDIRW......--AQLPLDS.TVRLVRDVIRDRFPAL........RGFLIKYRDTEG-DLVTITTTDELRLAASTHD------.......KlG.SLRLYIAEV
P92988_ARATH/290-382 WRPLKFVYDHDIRL......--GQMPVNC.RFKELREIVSSRFPSS........KAVLIKYKDNDG-DLVTITSTAELKLAESAADCILTKEpdtdksdSvG.MLRLHVVDV
Q9DGF6_XENLA/10-91 KLIIKAQLGEDIRR......--IPIHNEDiTYDELVLMMQRVFRGKll....tnDEVTIKYKDEDG-DLITIFDSSDLSFAIQCSR------.......-.-.ILKLTLFVN
BEM1_YEAST/478-551 TTKIKFYYKDDIFA......--LMLKGDT.TYKELRSKIAPRIDT-........DNFKLQTKLFDG-SGEEIKTDSQVSNIIQA--------.......-.-.KLKISVHDI
Q9GRV1_CAEEL/254-335 STVLKARHVDFVHK......TSIHHTNDL.TLIDLVLNVQWRLALPs......dANFVLKYKNKQG-DLVTLVVDSDLLMVLHTSGA-----.......-.-.TFDVTVVVD
SCD1_SCHPO/774-871 NVKIRLRLHEVSLV......--LVVAHDI.TFDELLAKVEHKIKLCgilkqavpFRVRLKYVDEDG-DFITITSDEDVLMAFETCTFELMDPv....hnKgMdTVSLHVVVY
Q9LE38_ARATH/744-827 FLRIKVSYGEEKIR......--LRMRNSR.RLRDLLWEIGKRFSIEd......mSRYDLKYLDEDN-EWVLLTCDEDVEECVDVCRTT----.......PsH.TIKLLLQAS
Q9SVF1_ARATH/673-759 GMKVKAMFGDSMLR......--MSLLPHS.RLTDLRREIAKRFGMDdv....lrSNFSLKYLDDDQ-EWVLLTCDADLEECIQVYKSS----.......SlKeTIRILVHHP
Q9S7B1_LOTJA/780-863 AFRVKATFADEKIR......--FSLQPIW.GFSDLQLEIARRFNLNd......vTNILLKYLDDDG-EWVVLACDGDLEECKDIHRSS----.......QsR.TIRLSLFQA
O65500_ARATH/867-955 LFENPPRLPENSSRkl...kAGGASKVKA.TFGEAKHEIARRFNIDn......iAPFDLKYLDDDK-EWVLLTCEADLEECIDIYRSS----.......QsR.TIKISVHEA
Q9SGW2_ARATH/747-829 LVSIKATYREDIIR......--FKISPESvSITELKQQVAKRLKLE.......tAAFELKYLDDDR-EWVSVSCDADLSECLDT-SAA----.......KaN.TLRLSVHDV
O22987_ARATH/863-945 TVTIKASYKDDIIR......--FRISSGS.GIMELKDEVAKRLKVD.......aGTFDIKYLDDDN-EWVLIACDADLQECLEIPRSS----.......RtK.IVRLLVHDV
O22864_ARATH/847-929 TLIVKASYREDTVR......--FKFEPSV.GCPQLYKEVGKRFKLQ.......dGSFQLKYLDDEE-EWVMLVTDSDLQECLEILHGM----.......GkH.SVKFLVRDL
YE45_SCHPO/574-653 QFTIKYRSIAGRVH......-RLRLDGIN.SVSDLRTAVEEREKE-........QLVTLTYIDDEG-DVVELVSDSDLREAILLAR------.......RrG.LPRLEVRGV
Q9SJQ5_ARATH/408-489 SFAFKFEDRKGRVQ......--RFNSTGE.SFEELMSVVMQRCEAD........SGLQIMYQDDEG-DKVLISRDSDLVAAVTFARSL----.......GqK.VLRLHLDFT
Q9LF97_ARATH/416-502 SFSFKFEDLKGRVH......--RFTSGAE.NLEELMGIVMQRIGSDnn...nveQRPQIIYEDDEG-DKVLITSDSDLVGAVTLARST----.......GqK.VLRLHLDFT
Q9LUF7_ARATH/413-498 TFAFKLQDKKGRMH......--RFMCETQ.SLTTLITAILQRMGDDie....pdNLPQIMYEDEDN-DKVVLASDNDLGAAVEHAKSI----.......GwK.GLKLHLDYT
Q9FMV3_ARATH/404-489 TFSFKIEDKKHRKH......--RFISDTR.SLTEVITAIIQRVGDDid....pdNFPQILYEDEDH-DKVLLASDSDLQAAIEHAKSI----.......GwK.SLRLHLDDS
M172_HUMAN/4-85 QVTLNVTFKNEIQS......FLVSDPENT.TWADIEAMVKVSFDL-........NTIQIKYLDEEN-EEVSINSQGEYEEALKMAVK-----.......QgN.QLQMQVHEG
PKC3_CAEEL/12-95 DIKLKTRFQGQVVV......--LYARPPL.ILDDFFALLKDACKQHk......kQDITVKWIDEDG-DPISIDSQMELDEAVRCLNSS----.......QeA.ELNIHVFVG
KPCZ_HUMAN/15-98 RVRLKAHYGGDIFI......--TSVDAAT.TFEELCEEVRDMCRLHq......qHPLTLKWVDSEG-DPCTVSSQMELEEAFRLARQC----.......RdE.GLIIHVFPS
KPCI_HUMAN/16-97 QVRVKAYYRGDIMI......--THFEPSI.SFEGLCNEVRDMCSFDn......eQLFTMKWIDEEG-DPCTVSSQLELEEAFRLYELN----.......KdS.ELLIHVF--
Q9GSZ3_DROME/30-111 SITVKTAYNGQIII......--TTINKNI.SYEELCYEIRNICRFPl......dQPFTIKWVDEEN-DPCTISTKMELDEAIRLYEMN----.......FdS.QLVIHVF--
Q9SB64_ARATH/7-92 ALVVKVSYGGVLRR......FRVPVKANG.QLDLEMAGLKEKIAALfnl..sadAELSLTYSDEDG-DVVALVDDNDLFDVTNQ--------.......RlK.FLKINVNAG
Q9HF59_ASHGO/680-760 MLMVRVSFNNDFYT......--LLVSMEA.EIDDVLVMLKKKLAHA.......gSICKIKYQDEDG-DFVMLESEDDWSVVKDMLKE-----.......SkErILNVWAF--
CDC24_YEAST/761-854 SILFRISYNNNSNNtssseiFTLLVEKVW.NFDDLIMAINSKISNThnn..nisPITKIKYQDEDG-DFVVLGSDEDWNVAKEMLAE-----.......NnEkFLNIRLY--
SCD2_SCHPO/459-532 TCKVKVRLGDETFA......--LRVPSDI.SFEDFCERLTNKLGE-........-CEHLSYRDTNANKVLPLNNVDDLRKACSQ--------.......-.-.ESGVLLFAE
PAR6_CAEEL/14-96 TLQVKSKFDSEWRRf....sIPMHSASGV.SYDGFRSLVEKLHHLE.......sVQFTLCYNSTGG-DLLPITNDDNLRKSFESARP-----.......-.-.LLRLLIQRR
O97111_DROME/19-101 LIEVKSKFDAEFRRw.....SFKRNEAEQ.SFDKFASLIEQLHKLT.......nIQFLILYIDPRDNDLLPINNDDNFGRALKTARP-----.......-.-.LLRVIVQRK
PAR6A_HUMAN/15-95 IVEVKSKFDAEFRR......FALPRASVS.GFQEFSRLLRAVHQIP.......gLDVLLGYTDAHG-DLLPLTNDDSLHRALASGPP-----.......-.-.PLRLLVQKR
PAR6G_HUMAN/18-98 AVEVKSKFGAEFRR......FSLDRHKPG.KFEDFYKLVVHTHHIS.......nSDVTIGYADVHG-DLLPINNDDNFCKAVSSANP-----.......-.-.LLRVFIQKR
PAR6B_HUMAN/16-96 TMEVKSKFGAEFRR......FSLERSKPG.KFEEFYGLLQHVHKIP.......nVDVLVGYADIHG-DLLPINNDDNYHKAVSTANP-----.......-.-.LLRIFIQKK
M3K3_HUMAN/44-123 DVRIKFEHNGERRI......--IAFSRPV.KYEDVEHKVTTVFGQ-........-PLDLHYMNNEL--SILLKNQDDLDKAIDILDRS----.......SsMkSLRILLLSQ
M3K2_HUMAN/43-122 DVRVKFEHRGEKRI......--LQFPRPV.KLEDLRSKAKIAFGQ-........-SMDLHYTNNEL--VIPLTTQDDLDKALELLDRS----.......IhMkSLKILLVIN
Q9M9L2_ARATH/19-102 EKGGSLSYKGGDAH......-AIDVDEQM.KFIDFISEIGEMFNCDv.....rtVSLKYFLPDNKK-TLISISNDKDLKRMIKFHE------.......NsN.TADVYLLPE
Q9FI74_ARATH/19-100 NKDGSLAYSGGDAY......-AIDIDQDT.CMSDFKSELAENFGFSw.....enMTLKYFLPGNKK-TLITISKDKDFQRMVSFSA------.......DaP.NVEIFVL--
Q9LF06_ARATH/45-138 PQTKSPRYVGGDTRi.....VAIPSSAET.SFASLVSHLTVTLKISy......pFKVKYQLPDQELDSLISVEADEDVQIMMEEHGYLSSES.....siPqS.RIRLFLFPL
Q9FRH9_ARATH/25-110 PPEKSLHYIGGETR......-LVIVPRGI.SFLDFFKLLSDKLLSGr......sFSLKYKLPSCDFDSLITVSDNEDLQNMIAEYDST----.......RlR.RIRLFLFPL
Q9ZU48_ARATH/89-181 PHDKSLCYMGGDTR......-IVVVDRNS.SLPSLIARLSNTLLDGr......sFTLKYQLPSEDLDSLISVTTDEDLDNMIEEYDRTISASn....stKpS.RLRLFLFTS
Q9LJQ7_ARATH/78-168 PHDKSLTYSGGETR......-IVVVDRRA.SLSSLRSRLSSMLLNGr......sFTLKYQLPSEDLDSLVTITTDEDLENMIEEYDRAASSAt....atAtQ.RLRLFLF--
Q9M0Y0_ARATH/42-130 PPDNQLCYVGGDNR......-MVAVHRHT.TFASLLSKLAK-LSGKs......nISVKYQLPNEDLDALISVSTDEDVENMMDEYDRVAQNQ.....npRaS.RLRLFLF--
Q9FGF3_ARATH/59-153 PHDNQLTYVNGETK......-ILSVDRGI.RFPVLASKLSTVCGGGdgg..ggeVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLLRLS......sKpA.RMRLFLFPA
Q9LTX8_ARATH/24-105 PSDSVLKYVGGETR......-VVAVSPDI.SFSELMKKLTAITEND........IVLKYQIIPEDLDALVSVKSDEDVKHMIEEYNRH----.......EtP.KLRTFLF--
Q9STG4_ARATH/89-178 PSDGMLRYVGGQTR......-IVSVKKNV.RFDEFEQKMIQVYGHP........VVVKYQLPDEDLDALVSVSSSEDIDNMMEEFEKLVERS.....sdGsG.KLRVFLFDA
Q9FKL3_ARATH/38-123 PQDGKLRYVGGETR......-IVSVNRDI.RYEELMSKMRELYDGA........AVLKYQQPDEDLDALVSVVNDDDVTNMMEEYDKL--GS.....gdGfT.RLRIFLF--
Q9SA26_ARATH/179-266 PGDSKLRYVGGETH......-IISIRKDI.SWQELRQKVLEIYYRT........HVVKYQLPGEDLDALVSVSCDEDLLNMMEEYNEM--EN.....rgGsQ.KLRMFLFSV
O64768_ARATH/191-277 PRDQKLRYVGGETR......-IIRISKTI.SFQELMHKMKEIFPEA........RTIKYQLPGEDLDALVSVSSDEDLQNMMEECIVF--GN......gGsE.KPRMFLFSS
Q9LRY7_ARATH/190-277 STDEKLKYVGGETH......-IISIRKNL.SWEELKKKTSAICQQL........HSIKYQLPGDELDSLISVSSDEDLQNMIEEYNGL--ER.....leGsQ.RPRLFLIPI
O23015_ARATH/119-206 PGDGKLRYIGGETR......-IISIRKHV.GLNELMHKTYALCNHP........HTIKYQLPGEDLDALISVCSDEDLLHMIEEYQEA--ET.....kaGsQ.RIRVFLVPS
Q9S843_ARATH/22-106 YPDGKLRYQGGDTR......-VLSVTRAI.SFTELKKKLGEICGIA.......vTSLRCQLPTDDLDALVTVRSDEDLKNLMEEYDLA----.......ItA.QVKIHVFLS
Q9LRV7_ARATH/43-132 YPDGKLRYNGGHTR......-VLAVPRSV.SFSELASKMAEMCGGVgg...sitVTIRCQLPTEDLDALVSITSDEDLVNLIEEYDL-VS--.......SsS.PMKIRVFLN
Q9STK4_ARATH/28-111 SIDGKLRYVGGFTR......-VLSVHHSI.SFTELTMKLEEFCGYS........VELKCQLPNGDLETLISVKSDEDLVNIVEEYDRV----.......YgG.KIRAILSPP
Q9FML0_ARATH/29-112 STDGKLRYVGGHTR......-VLSVDRSI.SFSELMKKLYEFCGYS........VDLRCQLPNGDLETLISVKSEEELAEIVEEYDRI----.......CgA.KIRAVLSPP
O60533_HUMAN/71-151 TVTVQCAFTVALRA......-----GRGA.DLSSLRALLGQAFLHQa.....qlGQFSYLAPGEDG-HWVPIPEEESLQRAWQDAAA-----.......CpR.GLQLQCRGA
O70145_MOUSE/350-428 PYMLKVHYKYTVVM......---ETRLGL.PYSQLRNMVSKKLALS.......pEHTKLSYRRRDS-HELLLLSEESMKDAWGQVKNY----.......-.-.CLTLWCEHT
NCF2_HUMAN/351-429 PYTLKVHYKYTVVM......---KTQPGL.PYSQVRDMVSKKLELR.......lEHTKLSYRPRDSNELVPLSEDS-MKDAWGQVKNY----.......-.-.CLTLWCENT