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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00564 phylogeny
for nucleotide alignment


 
(((((((REF2P_DROME/3-88,((Q9SGW2_ARATH/747-829,(O22987_ARATH/863-945,(O65500_ARATH/867-955,((Q9S7B1_LOTJA/780-863,Q9SVF1_ARATH/673-759),Q9LE38_ARATH/744-827)))),O22864_ARATH/847-929)),((BEM1_YEAST/478-551,((((((O23015_ARATH/119-206,Q9LRY7_ARATH/190-277),O64768_ARATH/191-277),Q9SA26_ARATH/179-266),(Q9FKL3_ARATH/38-123,Q9STG4_ARATH/89-178)),Q9LTX8_ARATH/24-105),(((Q9FML0_ARATH/29-112,Q9STK4_ARATH/28-111),(Q9LRV7_ARATH/43-132,Q9S843_ARATH/22-106)),((Q9FGF3_ARATH/59-153,((Q9LF06_ARATH/45-138,Q9M0Y0_ARATH/42-130),((Q9LJQ7_ARATH/78-168,Q9FRH9_ARATH/25-110),Q9ZU48_ARATH/89-181))),(Q9FI74_ARATH/19-100,Q9M9L2_ARATH/19-102))))),(((((PAR6B_HUMAN/16-96,PAR6G_HUMAN/18-98),PAR6A_HUMAN/15-95),(O97111_DROME/19-101,PAR6_CAEEL/14-96)),SCD2_SCHPO/459-532),(SCD1_SCHPO/774-871,(M172_HUMAN/4-85,(((KPCZ_HUMAN/15-98,(KPCI_HUMAN/16-97,Q9GSZ3_DROME/30-111)),PKC3_CAEEL/12-95),(M3K2_HUMAN/43-122,M3K3_HUMAN/44-123))))))),(((CDC24_YEAST/761-854,Q9HF59_ASHGO/680-760),((YE45_SCHPO/574-653,((Q9FMV3_ARATH/404-489,Q9LUF7_ARATH/413-498),(Q9LF97_ARATH/416-502,Q9SJQ5_ARATH/408-489))),Q9SB64_ARATH/7-92)),(Q9GRV1_CAEEL/254-335,Q9DGF6_XENLA/10-91))),((P92988_ARATH/290-382,O49385_ARATH/317-396),(Q9D222_MOUSE/18-97,O96611_DICDI/15-101))),O60533_HUMAN/71-151),((NCF2_HUMAN/351-429,O70145_MOUSE/350-428),(Q99JM8_MOUSE/20-102,Q13502_HUMAN/1-82))),NCF4_HUMAN/237-329,NCF4_MOUSE/237-329);
(((((((REF2P_DROME/3-88:1.21992,((Q9SGW2_ARATH/747-829:0.19991,(O22987_ARATH/863-945:0.21492,(O65500_ARATH/867-955:0.41245,((Q9S7B1_LOTJA/780-863:0.29542,Q9SVF1_ARATH/673-759:0.30458):0.05044,Q9LE38_ARATH/744-827:0.38241):0.06498):0.20349):0.11522):0.14962,O22864_ARATH/847-929:0.41863):0.09831):0.13264,((BEM1_YEAST/478-551:0.65496,((((((O23015_ARATH/119-206:0.27689,Q9LRY7_ARATH/190-277:0.18629):0.12260,O64768_ARATH/191-277:0.26518):0.09396,Q9SA26_ARATH/179-266:0.13892):0.13422,(Q9FKL3_ARATH/38-123:0.25949,Q9STG4_ARATH/89-178:0.19474):0.14031):0.17244,Q9LTX8_ARATH/24-105:0.30894):0.06849,(((Q9FML0_ARATH/29-112:0.07678,Q9STK4_ARATH/28-111:0.15012):0.23342,(Q9LRV7_ARATH/43-132:0.23626,Q9S843_ARATH/22-106:0.22627):0.11934):0.12657,((Q9FGF3_ARATH/59-153:0.33642,((Q9LF06_ARATH/45-138:0.44808,Q9M0Y0_ARATH/42-130:0.22391):0.08639,((Q9LJQ7_ARATH/78-168:0.23357,Q9FRH9_ARATH/25-110:0.36617):0.05126,Q9ZU48_ARATH/89-181:0.12316):0.12059):0.08730):0.06612,(Q9FI74_ARATH/19-100:0.29104,Q9M9L2_ARATH/19-102:0.30831):0.45462):0.07530):0.04311):0.47431):0.16734,(((((PAR6B_HUMAN/16-96:0.26803,PAR6G_HUMAN/18-98:0.20865):0.18263,PAR6A_HUMAN/15-95:0.29896):0.08694,(O97111_DROME/19-101:0.37967,PAR6_CAEEL/14-96:0.41403):0.13945):0.36219,SCD2_SCHPO/459-532:0.69410):0.16507,(SCD1_SCHPO/774-871:0.52496,(M172_HUMAN/4-85:0.52748,(((KPCZ_HUMAN/15-98:0.29085,(KPCI_HUMAN/16-97:0.18477,Q9GSZ3_DROME/30-111:0.39674):0.09086):0.33059,PKC3_CAEEL/12-95:0.39868):0.21707,(M3K2_HUMAN/43-122:0.27736,M3K3_HUMAN/44-123:0.31219):0.45439):0.07437):0.11110):0.03179):0.10184):0.14546):0.08393,(((CDC24_YEAST/761-854:0.30762,Q9HF59_ASHGO/680-760:0.37264):0.28791,((YE45_SCHPO/574-653:0.75150,((Q9FMV3_ARATH/404-489:0.23293,Q9LUF7_ARATH/413-498:0.10416):0.24174,(Q9LF97_ARATH/416-502:0.15938,Q9SJQ5_ARATH/408-489:0.17921):0.11170):0.38671):0.13510,Q9SB64_ARATH/7-92:0.49042):0.16586):0.16568,(Q9GRV1_CAEEL/254-335:0.51753,Q9DGF6_XENLA/10-91:0.53197):0.21889):0.09148):0.03924,((P92988_ARATH/290-382:0.34055,O49385_ARATH/317-396:0.30401):0.27125,(Q9D222_MOUSE/18-97:0.50528,O96611_DICDI/15-101:0.61211):0.16735):0.18218):0.24507,O60533_HUMAN/71-151:0.78168):0.06621,((NCF2_HUMAN/351-429:0.10641,O70145_MOUSE/350-428:0.12315):0.55501,(Q99JM8_MOUSE/20-102:0.04788,Q13502_HUMAN/1-82:0.06872):0.42608):0.04295):0.57958,NCF4_HUMAN/237-329:0.10253,NCF4_MOUSE/237-329:0.08972);