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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00548 - Peptidase_C3)
3C cysteine protease (picornain 3C)
(Pfam reference: accession no. PF00548)
(Interpro reference: accession no. IPR000199)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
21 sequences @ 210 aa
(ave. pairwise identity: 0.35)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 12.66)
nucleotides
(available for above)
19 sequences @ 630 bp
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 9.05)
amino acids, restricted set
(corresp. to available nt seqs)
19 sequences @ 210 aa
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 12.01)