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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00544 alignment
(10 sequences with 247 aa)


PLYD_PSEMA/45-239 PQVLVINSNISASSLTKVNMGANK---------TLIGSFQNR-TLEN---------IHLRATAQSQNIILQNLIFKHSAN---IKANDDI-------QVYLNYGSKYWIDHCS--FVG--H---------SWSTTDGSEDK--LLYIGEKADYATISNCFFGSHKYGLIFGHPADDNNAAFNGYPRLTLCHNRFDNMEVRAPGLMRYGYFHVYNNYINK-------F-HLGFTLAQNANILSESNYF
PLYD_ERWCA/46-241 KTIVVLGSSLKTSALTKVVFGSNK---------TIVGSFGGANVLTN---------IHLRAESNSSNVIFQNLVFKHDVA---IKDNDDI-------QLYLNYGKGYWVDHCS--WPG--H---------TWSDNDGSLDK--LIYIGEKADYITISNCLFSNHKYGCIFGHPADDNNSAYNGYPRLTICHNYYENIQVRAPGLMRYGYFHVFNNYVNK-------F-QLAFTVAQNANVISERNVF
PELC_ERWCH/71-279 AYPLVITYTGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGAN-------GSSANFGIWIKKSS-DVVVQNMRIGYLPGGAKDG-----DMIRVDD-SPNVWVDHNELFAANHECDG----------TPDNDTTFESAVDIKGASNTVTVSYNY--I-HGVKKVGLDGSS--SSDTG-RNITYHHNYYNDVNARLP-LQRGGLVHAYNNLYTN-------ITGSGLNVRQNGQALIENNWF
PEL1_ERWCA/70-278 AYPLVITYNGNEDALIKAAEANICGQWSKDPRGVEIKEFTKGITILGTN-------GSSANFGIWMVNSS-NVVVRNMRFGYMPGGAKDG-----DAIRIDN-SPNVWIDHNEIFAKNFECAG----------TPDNDTTFESAVDIKKGATNVTVSYNY--I-HGVKKVGLSGSS--NTDTG-RDLTYHHNIYSDVNSRLP-LQRGGKVHAYNNLYDG-------IKSSGFNVRQKGIALIESNWF
PELD_ERWCH/81-312 TDPKIIQVTGAIDISGGKAYTSFDDQK---ARSQISVPSNTTIIGIGSNGKFTNGSLVIKGVS---NVILRNLYIETPVDVAPHYEEGDGWNAEWDAAVIDN-STRVWVDHVTISDGSFTDDKYTTKNGEKYVQHDG------ALDIKKGSDYVTISSSRFELHDKTILIGHSDSNG-SQDSGKLRVTFHNNVFDRVTERTP-RVRFGSIHAYNNVYLGDVKNSVYPYLYSFGLGTSGTILSESNSF
PELA_ERWCH/84-319 AEAKIIQIKGTIDISGGTPYTDFADQK---ARSQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDG------ALDIKRGSDYVTISNSLIDQHDKTMLIGHNDTNS-AQDKGKLHVTLFNNVFNRVTERAP-RVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSF
SBP_CRYJA/102-289 KMPMYIAGYKTFDGRGAQVYIGNGGP-------CVFIKRVSNVIIHG---------LHLYGCS----TSVLGNVLINESFGVEPVHPQDG-----DALTLRT-ATNIWIDHNSFSN-----------------SSDG------LVDVTLSSTGVTISNNLFFNHHKVMLLGHDDAY--SDDKSMKVTVAFNQFGPNCGQRMP-RARYGLVHVANNNYD-------PWTIYAIGGSSNPTILSEGNSF
MPAA2_AMBAR/129-313 QQEMVVTSDKTIDGRGAKVELVYG---------GITLMNVKNVIIHN---------IDIHDVR----VLPGGRIKSNGGP-AIPRHQSDG-----DAIHVTG-SSDIWIDHCTLSK-----------------SFDG------LVDVNWGSTGVTISNCKFTHHEKAVLLGASDTH--FQDLKMHVTLAYNIFTNTVHERMP-RCRFGFFQIVNNFYD-------RWDKYAIGGSSNPTILSQGNKF
PEL56_LYCES/127-310 TRELIVSSNKTIDGRGKYVHIANGA--------GIKIQSASNVIISN---------LRIHNIV----PTAGGLLRESDDH-LGLRGADEG-----DAISIFN-SHDIWIDHISMSR-----------------ATDG------LIDAVAGSTNITISNCHFTDHEKVMLFGANDHA--EEDRGMKITLAYNHFGKRLDQRMP-RCRFGFFHLVNNDYT-------HWERYAIGGSSGATIISQGN--
PEL18_LYCES/134-319 KQELVMNSYKTIDGRGASVHISGGP--------CITIHHTSNIIIHG---------INIHDCK----QSGNGNIRDSPNH-SGWWDVSDG-----DGISIFG-GKNIWVDHCSLSN-----------------CHDG------LIDAIHGSTAITISNNYFTHHDKVMLLGHSDSF--TQDKGMQVTVAFNHFGEGLVQRMP-RCRHGYFHVVNNDYT-------HWEMYAIGGSAAPTINSQGNRF