PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00542 - Ribosomal_L12) |
| Ribosomal protein L7/L12 C-terminal domain |
| (Pfam reference: accession no. PF00542) |
| (Interpro reference: accession no. IPR000206) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
10 sequences @ 70 aa (ave. pairwise identity: 0.60) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 3.07) |
| nucleotides (available for above) |
5 sequences @ 210 bp (ave. pairwise identity: 0.57) |
New Hampshire format (total tree length: 127.59) |
|
amino acids, restricted set (corresp. to available nt seqs) |
5 sequences @ 70 aa (ave. pairwise identity: 0.53) |
New Hampshire format (total tree length: 1.91) |