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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF00533 - BRCT)
BRCA1 C Terminus (BRCT) domain
(
Pfam
reference: accession no.
PF00533
)
(
Interpro
reference: accession no.
IPR001357
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
116 sequences @ 148 aa
(ave. pairwise identity: 0.17)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 113.56)
nucleotides
(available for above)
111 sequences @ 444 bp
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 68.68)
amino acids, restricted set
(corresp. to available nt seqs)
111 sequences @ 148 aa
(ave. pairwise identity: 0.17)
New Hampshire format
(total tree length: 111.78)