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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00529 phylogeny
for nucleotide alignment


 
((((((((CNRB_ALCEU/99-377,CZCB_ALCEU/220-501),((((((MTRC_NEIGO/71-366,MEXA_PSEAE/62-346),(MDTE_ECOLI/60-357,(ACRA_ECOLI/64-361,ACRE_ECOLI/63-360))),O31099_PSEPU/63-347),O68440_9RHIZ/62-355),(Q51395_PSEAE/62-357,(Q9ZNG9_PSEAE/60-354,O87935_BURPS/64-361))),P95421_PSEAE/63-357)),((P74828_9SPHN/86-393,((((HLYD_ACTAC/95-402,(HLYD_PASSP/95-402,(RT1D_ACTPL/95-401,RT3D_ACTPL/95-402))),HLY4_ECOLI/95-403),Q47463_ECOLI/95-409),CYAD_BORPE/92-370)),(((APRE_PSEAE/51-362,((O85376_PROMI/60-371,Q54457_SERMA/62-373),(PRTE_ERWCH/67-378,Q57387_SERMA/62-367))),O87809_PSETO/57-367),((O05694_RHILE/54-365,O33679_RHIME/58-369),P96438_RHIME/94-403)))),((((YHCQ_ECOLI/1-285,((YIAV_ECOLI/62-349,YIBH_ECOLI/62-349),(Q9ZDT2_RICPR/53-345,O67159_AQUAE/43-370))),(YJCR_ECOLI/47-338,YDHJ_ECOLI/43-282)),((O85846_SPHAR/63-374,O51918_VIBCH/59-370),((EMRA_ECOLI/60-343,(EMRA_HAEIN/60-343,EMRK_ECOLI/53-336)),O85162_PSEAE/55-338))),NOLF_RHIME/68-302)),YHII_ECOLI/46-339),P74462_SYNY3/74-401),LCND_LACLA/59-413),CVAA_ECOLI/53-380,Q46972_ECOLI/53-380);
((((((((CNRB_ALCEU/99-377:0.52047,CZCB_ALCEU/220-501:0.56540):0.31427,((((((MTRC_NEIGO/71-366:0.47060,MEXA_PSEAE/62-346:0.15290):0.05051,(MDTE_ECOLI/60-357:0.39717,(ACRA_ECOLI/64-361:0.17885,ACRE_ECOLI/63-360:0.19001):0.09618):0.10786):0.05920,O31099_PSEPU/63-347:0.36057):0.06796,O68440_9RHIZ/62-355:0.50059):0.08349,(Q51395_PSEAE/62-357:0.23317,(Q9ZNG9_PSEAE/60-354:0.26542,O87935_BURPS/64-361:0.18899):0.17448):0.05264):0.14240,P95421_PSEAE/63-357:0.39958):0.10720):0.23584,((P74828_9SPHN/86-393:0.47734,((((HLYD_ACTAC/95-402:0.20418,(HLYD_PASSP/95-402:0.20514,(RT1D_ACTPL/95-401:0.20086,RT3D_ACTPL/95-402:0.18641):0.07274):0.12829):0.10701,HLY4_ECOLI/95-403:0.19736):0.08755,Q47463_ECOLI/95-409:0.30998):0.90477,CYAD_BORPE/92-370:0.54000):0.11018):0.10362,(((APRE_PSEAE/51-362:0.24992,((O85376_PROMI/60-371:0.69469,Q54457_SERMA/62-373:0.16650):0.23730,(PRTE_ERWCH/67-378:0.35028,Q57387_SERMA/62-367:0.33530):0.07475):0.08736):0.07130,O87809_PSETO/57-367:0.35709):0.17669,((O05694_RHILE/54-365:0.26933,O33679_RHIME/58-369:0.16136):0.24366,P96438_RHIME/94-403:0.48952):0.09558):0.15890):0.30540):0.10324,((((YHCQ_ECOLI/1-285:0.77648,((YIAV_ECOLI/62-349:0.24232,YIBH_ECOLI/62-349:0.17051):0.38673,(Q9ZDT2_RICPR/53-345:0.66105,O67159_AQUAE/43-370:0.46950):0.48266):0.15668):0.02779,(YJCR_ECOLI/47-338:0.58277,YDHJ_ECOLI/43-282:0.46586):0.06904):0.20951,((O85846_SPHAR/63-374:0.27910,O51918_VIBCH/59-370:0.47577):0.09637,((EMRA_ECOLI/60-343:0.24521,(EMRA_HAEIN/60-343:0.35860,EMRK_ECOLI/53-336:0.28667):0.20615):0.17242,O85162_PSEAE/55-338:0.24442):0.05808):0.12933):0.16020,NOLF_RHIME/68-302:0.70789):0.15502):0.23670,YHII_ECOLI/46-339:0.81785):0.28125,P74462_SYNY3/74-401:0.85196):0.26451,LCND_LACLA/59-413:0.96146):1.15231,CVAA_ECOLI/53-380:0.11190,Q46972_ECOLI/53-380:0.23280);