EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00522 alignment
(10 sequences with 300 bp)


VPX_SIVM1/5-99 AGGGAGAGAATCCCACCTGGAAACAGTGGAGAAGAGACAATAGGAGAAGCCTTC---GAGTGGCTAAACAGAACAGTAGAGGAGATAAACAGAGAGGCGGTAAACCACCTACCGAGGGAGCTAATTTTCCAGGTTTGGCAAAGGTCTTGGGAATACTGGCATGATGAACAAGGGATGTCACAAAGCTATACAAAATACAGATACTTGTGTTTAATACAAAAGGCTTTATTTATGCATTGCAAGAAAGGCTGTAGATGTCTAGGG------------GAAGGACACGGGGCAGGGGGATGG
VPX_HV2BE/5-99 AGAGAAAGGGTACCGCCAGGAAACAGTGGAGAAGAGACCATTGGAGAGGCCTTC---GAGTGGCTAGAGAGGACCATAGAAGCCTTAAACAGGGAGGCAGTGAACCATCTGCCCCGAGAGCTCATTTTCCAGGTGTGGCAAAGGTCCTGGAGATATTGGCATGATGAACAAGGGATGTCAGCAAGCTACACAAAGTATAGATATTTGTGCCTAATGCAAAAAGCTATATTTACACATTTCAAGAGAGGGTGCACTTGCTGGGGG------------GAGGACATGGGCCGGGAAGGATTG
VPX_HV2NZ/5-99 AGGGAAACAGTGCCACCAGGAAACAGCGGCGAGGAGACTATCGAAGAGGCCTTC---GCATGGCTAGACAGGACAGTAGAGGCTATAAACAGAGAGGCAGTGAATCACCACCCACGAGAGCTCATTTTCCAGGTCTGGCAGAGGTCCTGGAGATACTGGCATGATGAACAAGGGATGTCAACAAGCTACACAAAATATAGATATTTGTGCTTAATACAGATGGCAATGTACATGCATGCTAAGAGAGATGGCACTTGCCTGGGG------------GGAGGCATGGGCCAGAAGGGTGGA
VPX_SIVAI/8-106 AGAGAACCTTTACCAGGATGGCTGGAAATCTGGGATCTAGACAGGGAGCCATGGGACGAATGGCTACAAGACATGCTCAGGGATCTAAACGAAGAAGCCAGAAGGCACTTTGGAATGAACATGCTAATCCGAGTATGGAATTACTGTGTAGAGGAGGGA---AGGAGACATAATACCCCATGGAATGAGATAGGCTACAAGTACTATAGAATTGTTCAAAAGTCTATGTTTGTACATTTCAGATGTGGTTGTAGAAGGAGAGGACCTTTTTCCCCTTACGAAGAGAGGAGAAATGGACAA
VPX_SIVA1/8-106 AGAGAGGAGAGACCAGGAGGACTAGAAATTTGGGATCTCAGCAGGGAGCCGTGGGACGAATGGCTCAGAGATATGGTAGAAGAAATCAACAACGAAGCCAAACTGCATTTTGGCCGAGAACTCCTATACCAAGTATGGAATTATTGTCAGGAGGAAGGG---GAGAGACAGGGAAGACCCATAGCGGAAAGGGCATATAAGTATTATCGCTTAGTTCAGAAAGCTCTCTTTGTGCATTTCCGGTGTGGATGTCGCAGGAGACAACCCTTTGAGCCATACGAGGAGAGGAGAAATGGACAA
VPR_SIVM1/2-84 GAAGAAAGACCTCCAGAAAAT---------GAAGGCCCACAAAGGGAACCATGGGATGAGTGGGTAGTGGAAGTTCTGAAAGAACTGAAAGAAGAAGCTTTAAAGCATTTTGATCCTCGGCTTCTAACCGCACTTGGTAATCATATCTATAATAGACATGGAGACACCCTTGAGGGA---------------GCAGGAGAACTCATTAGAATCCTCCAACGAGCGCTCTTCATACATTTCAGAAGCGGCTGCAGC---------------------------CATTCCAGAATCGGCCAA
VPR_HV2D1/6-88 ACAGAGTTTCCCCCAGAAGAT---------GGGACCCCACGGAGAGAGCTAGGGAGTACCTGGGTAATAGAAACTCTGAAGGAAATCAAGGAAGAAGCCTTAAAACATTTTGATCCCTGCTTGCTAATTGCTCTTGGCAACTATATCTATAATAGACATGGAGACACCCTTGAAGGA---------------GCCAGAGAGCTCATTAGAGTCCTACAACGAGCCCTCTTCGTGCACATCAGAGCGGGATGTGAC---------------------------CGCTCAAGAAAGGGCCAA
VPR_HV2CA/6-88 ACAGAGCTCCCTCCAGAGGAT---------GGGACCCCACCGAGGGAGCCAGGGGATGAATGGGTAATAGAAATCCTGAGAGACATAAAAGAAGAAGCCCTAAAGCACTTTGACCCTCGCTTGCTAACTGCTCTTGGCGGACATATCTATGCTAGACATGGAGACACCCTTGAAAGA---------------GCCAGAGAGCTCATTAGGGTCCTGCAACGAGCCCTCTTCACGCACTTCAGGGCAGGATGCAAC---------------------------CACTCAAGAATTGGCCAA
VPR_HV1A2/1-83 ATGGAACAAGCCCCAGAAGAC---------CAAGGGCCACAGAGGGAGCCATACAATGAATGGACACTAGAGCTTTTAGAGGAGCTTAAGAGAGAAGCTGTTAGACATTTTCCTAGGCCATGGCTCCATAGCTTAGGACAATATATCTATGAAACTTATGGGGATACTTGGGCAGGA---------------GTGGAAGCCATAATAAGAATTCTGCAACAACTGCTGTTTATTCATTTCAGAATTGGGTGTCAA---------------------------CATAGCAGAATAGGCATT
VPR_SIVGB/6-84 GATGAGCAAGTATCAGAAGAT---------CAAGGACCTCCCAGAGAGCCATACAATCAGTGGCTAGCAGATACTATGGAGGAAATAAAGGAAGAAGCAAGAAAGCACTTCCCTCTCATTATCCTAAATGCAGTATCAGAATATTGTGTGCAAAACACAGGGAGTGAGGAAGAGGCC---------------TGTGAGAAATTTATTACCTTAATGAATAGAGCCATTTGGGTCCACCTAGCTCAAGGGTGTGAT---------------------------------------GGAACC