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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF00505 alignment |
| UBF1_HUMAN/112-180 | PKKPLTPYFRFFMEKRAKYAKLHP..EMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR |
| TFAM_HUMAN/50-118 | PKKPVSSYLRFSKEQLPIFKAQNP..DAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFK |
| TFAM_MOUSE/49-117 | PKKPMSSYLRFSTEQLPKFKAKHP..DAKLSELVRKIAALWRELPEAEKKVYEADFKAEWKAYKEAVSKYK |
| SSRP_HUMAN/547-615 | PKRPMSAYMLWLNASREKIKSDHP..GISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE |
| HMG1A_CHITE/5-71 | PKRPLSAYMLWLNSARESIKKENP..DFKVTEIAKKGGELWRGMKD--KSEWEAKAAKMKEEYEKAMKEFE |
| SSRP_DROME/555-621 | PKRATTAFMLWLNDTRESIKRENP..GIKVTEIAKKGGEMWKELKD--KSKWEDAAAKDKQRYHDEMRNYK |
| ABF2_YEAST/43-111 | PKRPTSAYFLYLQDHRSQFVKENP..TLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEYQKAKKEFD |
| HMGL_WHEAT/42-111 | PKRAPSAFFVFMGEFREEFKQKNP.kNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYN |
| HMGL_SOYBN/44-113 | PKRPPSAFFVFMEEFRKVFNKEHP.eNKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYN |
| HMGH_STRPU/100-168 | PKRNLSAFFIFSGENRAAIKSVHP..NWSVGDIAKELAVRWRAMTAGEKIPFDKGAAKDKERYIKAMAEYK |
| HMG1_RAT/94-162 | PKRPPSAFFLFCSEYRPKIKGEHP..GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR |
| NHP6A_YEAST/21-89 | PKRALSAYMFFANENRDIVRSENP..DITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKELYN |
| NHP1_BABBO/23-93 | PKRALSSYMFFAKEKRVEIIAENPeiAKDVAAIGKMIGAAWNALSDEEKKPYERMSDEDRVRYEREKAEYA |
| HMGH_IRV6/54-122 | PKRNKSSYLFFCQEIRPSIVAEMP..DIKPNQVMVHLGKKWSELPLEDRKKYDVMAVEDRKRYLASKEANK |
| HMGB_TETTH/18-86 | PKRPQTGFFIYKSEVFAKRRTECP..TLKVPEIVSKISEEYKALPEKEKQKYEEAYRKEKATYDKQNDQWK |
| HMGL_TRYBR/118-186 | PKPAVSSYLLFVADQREELKAKNP..GMQNTAILQTLGKMWSDASDDVKEHYRKKAEEDKARFRREVDEYK |
| SRY_GORGO/60-128 | VKRPMNAFIVWSRDQRRKMALENP..RMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYK |
| SOX2_CHICK/39-107 | VKRPMNAFMVWSRGQRRKMAQENP..KMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYK |
| SOX9_CHICK/106-174 | VKRPMNAFMVWAQAARRKLADQYP..HLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYK |
| SOX4_HUMAN/59-127 | IKRPMNAFMVWSQIERRKIMEQSP..DMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYK |
| MAT2_COCHE/131-199 | APRPMNCWIIFRDAMHKHLKAEFP..HLTIQEISTRCSHIWHNLSPEAKKPWQDAAQSAKEEHLRQHPNYK |
| LEF1_MOUSE/297-365 | IKKPLNAFMLYMKEMRANVVAECT..LKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWS |
| SMR2_PODAN/161-229 | IRRPRNQFIIYRQWMSARLHEDNP..GLTAGAISSIVAKAWKGETPQVKAHFKALAVEEDRKHKLAYPGYR |
| MATD_NEUCR/147-215 | TSRPRNQFVLYYQWLLDTLFSEDP..SLSARNISQIVAGLWNSEHPAAKARFRELAEMEVHRHRAENPHLY |
| MTMC_SCHPO/103-171 | TPRPPNAFILYRKEKHATLLKSNP..SINNSQVSKLVGEMWRNESKEVRMRYFKMSEFYKAQHQKMYPGYK |
| FPR1_PODAN/169-237 | IPRPPNAYILYRKDQQAALKAANP..GIPNNDISVMTGGMWKKESPEVRAEYQRRASEIKAKLMSAHPHYR |