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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00505 - HMG_box)
HMG (high mobility group) box
(Pfam reference: accession no. PF00505)
(Interpro reference: accession no. IPR000910)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
30 sequences @ 71 aa
(ave. pairwise identity: 0.29)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 18.46)
nucleotides
(available for above)
26 sequences @ 213 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 11.71)
amino acids, restricted set
(corresp. to available nt seqs)
26 sequences @ 71 aa
(ave. pairwise identity: 0.28)
New Hampshire format
(total tree length: 17.03)