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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00500 - Late_protein_L1) |
| L1 (late) protein |
| (Pfam reference: accession no. PF00500) |
| (Interpro reference: accession no. IPR002210) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
19 sequences @ 536 aa (ave. pairwise identity: 0.56) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 6.17) |
| nucleotides (available for above) |
15 sequences @ 1608 bp (ave. pairwise identity: 0.60) |
New Hampshire format (total tree length: 4.31) |
|
amino acids, restricted set (corresp. to available nt seqs) |
15 sequences @ 536 aa (ave. pairwise identity: 0.57) |
New Hampshire format (total tree length: 4.59) |