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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00497 - SBP_bac_3) |
| Bacterial extracellular solute-binding proteins, family 3 |
| (Pfam reference: accession no. PF00497) |
| (Interpro reference: accession no. IPR001638) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
81 sequences @ 297 aa (ave. pairwise identity: 0.26) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 57.20) |
| nucleotides (available for above) |
80 sequences @ 891 bp (ave. pairwise identity: 0.40) |
New Hampshire format (total tree length: 37.76) |
|
amino acids, restricted set (corresp. to available nt seqs) |
80 sequences @ 297 aa (ave. pairwise identity: 0.26) |
New Hampshire format (total tree length: 56.54) |